RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 ADGRL3Q9HAR2 1447 aa17.71■□□□□ 0.43
HLA-DQB1-203ENST00000399082 PRAM1Q96QH2 718 aa17.7■□□□□ 0.42
HLA-DQB1-203ENST00000399082 CARD11Q9BXL7 1154 aa17.69■□□□□ 0.42
HLA-DQB1-203ENST00000399082 QRICH2Q9H0J4 1663 aa17.67■□□□□ 0.42
HLA-DQB1-203ENST00000399082 ADGRB2O60241 1585 aa17.67■□□□□ 0.42
HLA-DQB1-203ENST00000399082 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
HLA-DQB1-203ENST00000399082 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
HLA-DQB1-203ENST00000399082 DCCP43146 1447 aa17.64■□□□□ 0.42
HLA-DQB1-203ENST00000399082 MSH6P52701 1360 aa17.64■□□□□ 0.41
HLA-DQB1-203ENST00000399082 C19orf44Q9H6X5 657 aa17.63■□□□□ 0.41
HLA-DQB1-203ENST00000399082 POGKQ9P215 609 aa17.63■□□□□ 0.41
HLA-DQB1-203ENST00000399082 CENPJQ9HC77 1338 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-203ENST00000399082 USP47Q96K76 1375 aa17.63■□□□□ 0.41
HLA-DQB1-203ENST00000399082 FMN2Q9NZ56 1722 aa17.62■□□□□ 0.41
HLA-DQB1-203ENST00000399082 TULP4Q9NRJ4 1543 aa17.62■□□□□ 0.41
HLA-DQB1-203ENST00000399082 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
HLA-DQB1-203ENST00000399082 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-203ENST00000399082 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-203ENST00000399082 MST1RQ04912 1400 aa17.61■□□□□ 0.41
HLA-DQB1-203ENST00000399082 HIRIP3Q9BW71 556 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-203ENST00000399082 USP32Q8NFA0 1604 aa17.6■□□□□ 0.41
HLA-DQB1-203ENST00000399082 SBNO2Q9Y2G9 1366 aa17.59■□□□□ 0.41
HLA-DQB1-203ENST00000399082 ST20-MTHFSA0A0A6YYL1 179 aa17.58■□□□□ 0.4
HLA-DQB1-203ENST00000399082 TESK2Q96S53 571 aa17.58■□□□□ 0.4
HLA-DQB1-203ENST00000399082 C1orf167Q5SNV9 1468 aa17.56■□□□□ 0.4
HLA-DQB1-203ENST00000399082 CADPS2Q86UW7 1296 aa17.56■□□□□ 0.4
HLA-DQB1-203ENST00000399082 RGPD8O14715 1765 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-203ENST00000399082 UBAP1LF5GYI3 381 aa17.55■□□□□ 0.4
HLA-DQB1-203ENST00000399082 PRR36Q9H6K5 1346 aa17.54■□□□□ 0.4
HLA-DQB1-203ENST00000399082 WASLO00401 505 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-203ENST00000399082 ATF3P18847 181 aa17.54■□□□□ 0.4
HLA-DQB1-203ENST00000399082 ATP7BP35670 1465 aa17.54■□□□□ 0.4
HLA-DQB1-203ENST00000399082 TOPAZ1Q8N9V7 1692 aa17.53■□□□□ 0.4
HLA-DQB1-203ENST00000399082 ROBO1Q9Y6N7 1651 aa17.53■□□□□ 0.4
HLA-DQB1-203ENST00000399082 HSPA5P11021 654 aaKnown RBP17.53■□□□□ 0.4
HLA-DQB1-203ENST00000399082 SLAIN2Q9P270 581 aa17.53■□□□□ 0.4
HLA-DQB1-203ENST00000399082 NUTM2FA1L443 756 aa17.52■□□□□ 0.4
HLA-DQB1-203ENST00000399082 TOM1O60784 492 aa17.52■□□□□ 0.4
HLA-DQB1-203ENST00000399082 ANKARQ7Z5J8 1434 aa17.52■□□□□ 0.4
HLA-DQB1-203ENST00000399082 ZEB1P37275 1124 aaPredicted RBP17.51■□□□□ 0.39
HLA-DQB1-203ENST00000399082 EIF4G2P78344 907 aaKnown RBP eCLIP17.51■□□□□ 0.39
HLA-DQB1-203ENST00000399082 CDK19Q9BWU1 502 aa17.51■□□□□ 0.39
HLA-DQB1-203ENST00000399082 DISP3Q9P2K9 1392 aa17.5■□□□□ 0.39
HLA-DQB1-203ENST00000399082 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
HLA-DQB1-203ENST00000399082 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
HLA-DQB1-203ENST00000399082 PIP4K2BP78356 416 aa17.48■□□□□ 0.39
HLA-DQB1-203ENST00000399082 EVC2Q86UK5 1308 aa17.47■□□□□ 0.39
HLA-DQB1-203ENST00000399082 CABP2Q9NPB3 220 aa17.47■□□□□ 0.39
HLA-DQB1-203ENST00000399082 ITSN1Q15811 1721 aa17.47■□□□□ 0.39
HLA-DQB1-203ENST00000399082 NHSL1Q5SYE7 1610 aa17.47■□□□□ 0.39
HLA-DQB1-203ENST00000399082 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
HLA-DQB1-203ENST00000399082 KIF1AQ12756 1690 aa17.45■□□□□ 0.38
HLA-DQB1-203ENST00000399082 NUDT16Q96DE0 195 aaKnown RBP17.45■□□□□ 0.38
HLA-DQB1-203ENST00000399082 AHDC1Q5TGY3 1603 aaPredicted RBP17.45■□□□□ 0.38
HLA-DQB1-203ENST00000399082 SRPK2P78362 688 aaKnown RBP17.44■□□□□ 0.38
HLA-DQB1-203ENST00000399082 C11orf95C9JLR9 678 aaPredicted RBP17.43■□□□□ 0.38
HLA-DQB1-203ENST00000399082 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
HLA-DQB1-203ENST00000399082 DDX17Q92841 729 aaKnown RBP17.42■□□□□ 0.38
HLA-DQB1-203ENST00000399082 MYOM1P52179 1685 aa17.42■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PPIP5K1Q6PFW1 1433 aa17.41■□□□□ 0.38
HLA-DQB1-203ENST00000399082 COL16A1Q07092 1604 aaPredicted RBP17.41■□□□□ 0.38
HLA-DQB1-203ENST00000399082 TMF1P82094 1093 aa17.41■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PHF8Q9UPP1 1060 aa17.41■□□□□ 0.38
HLA-DQB1-203ENST00000399082 ATAD2Q6PL18 1390 aa17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PXDNQ92626 1479 aa17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PMFBP1Q8TBY8 1022 aa17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 CCDC61Q9Y6R9 512 aa17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 PHLPP1O60346 1717 aa17.4■□□□□ 0.38
HLA-DQB1-203ENST00000399082 CD163L1Q9NR16 1453 aa17.39■□□□□ 0.37
HLA-DQB1-203ENST00000399082 PLEKHG3A1L390 1219 aa17.39■□□□□ 0.37
HLA-DQB1-203ENST00000399082 POLR3AO14802 1390 aaPredicted RBP17.39■□□□□ 0.37
HLA-DQB1-203ENST00000399082 SLC24A1O60721 1099 aa17.38■□□□□ 0.37
HLA-DQB1-203ENST00000399082 TRPM3Q9HCF6 1732 aaPredicted RBP17.38■□□□□ 0.37
HLA-DQB1-203ENST00000399082 AKAP12Q02952 1782 aa17.38■□□□□ 0.37
HLA-DQB1-203ENST00000399082 FOXO3O43524 673 aa17.37■□□□□ 0.37
HLA-DQB1-203ENST00000399082 CABP1Q9NZU7 370 aa17.37■□□□□ 0.37
HLA-DQB1-203ENST00000399082 HSPA1LP34931 641 aa17.36■□□□□ 0.37
HLA-DQB1-203ENST00000399082 SOS2Q07890 1332 aaPredicted RBP17.36■□□□□ 0.37
HLA-DQB1-203ENST00000399082 SLC12A5Q9H2X9 1139 aa17.35■□□□□ 0.37
HLA-DQB1-203ENST00000399082 ACEP12821 1306 aa17.35■□□□□ 0.37
HLA-DQB1-203ENST00000399082 KIF7Q2M1P5 1343 aa17.35■□□□□ 0.37
HLA-DQB1-203ENST00000399082 CPSF1Q10570 1443 aaKnown RBP17.35■□□□□ 0.37
HLA-DQB1-203ENST00000399082 NRKQ7Z2Y5 1582 aa17.35■□□□□ 0.37
HLA-DQB1-203ENST00000399082 XPCQ01831 940 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-203ENST00000399082 MON2Q7Z3U7 1717 aa17.34■□□□□ 0.37
HLA-DQB1-203ENST00000399082 NPHP3Q7Z494 1330 aa17.34■□□□□ 0.37
HLA-DQB1-203ENST00000399082 ILDR1Q86SU0 546 aaPredicted RBP17.34■□□□□ 0.37
HLA-DQB1-203ENST00000399082 SSH2Q76I76 1423 aa17.32■□□□□ 0.36
HLA-DQB1-203ENST00000399082 CDCA8Q53HL2 280 aa17.32■□□□□ 0.36
HLA-DQB1-203ENST00000399082 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
HLA-DQB1-203ENST00000399082 USP6P35125 1406 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 CCDC7Q96M83 1385 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 CACNB1Q02641 598 aaPredicted RBP17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 KRT28Q7Z3Y7 464 aa17.31■□□□□ 0.36
HLA-DQB1-203ENST00000399082 NGDNQ8NEJ9 315 aaKnown RBP17.3■□□□□ 0.36
HLA-DQB1-203ENST00000399082 TMC1Q8TDI8 760 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms