RNA–Protein interactions for RNA: ENST00000399075.6

C4orf3-201, Transcript of chromosome 4 open reading frame 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene C4orf3, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf3-201ENST00000399075 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
C4orf3-201ENST00000399075 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
C4orf3-201ENST00000399075 APAF1O14727 1248 aa14.88□□□□□ -0.03
C4orf3-201ENST00000399075 CFAP65Q6ZU64 1925 aaKnown RBP14.88□□□□□ -0.03
C4orf3-201ENST00000399075 CHGAP10645 457 aaKnown RBP14.88□□□□□ -0.03
C4orf3-201ENST00000399075 GGT6Q6P531 493 aa14.88□□□□□ -0.03
C4orf3-201ENST00000399075 CENPQQ7L2Z9 268 aaPredicted RBP14.88□□□□□ -0.03
C4orf3-201ENST00000399075 RICTORQ6R327 1708 aa14.87□□□□□ -0.03
C4orf3-201ENST00000399075 CCDC146Q8IYE0 955 aa14.87□□□□□ -0.03
C4orf3-201ENST00000399075 ZBTB47Q9UFB7 747 aaPredicted RBP14.87□□□□□ -0.03
C4orf3-201ENST00000399075 ZFYVE9O95405 1425 aa14.87□□□□□ -0.03
C4orf3-201ENST00000399075 TRAK1Q9UPV9 953 aa14.86□□□□□ -0.03
C4orf3-201ENST00000399075 NSD2O96028 1365 aa14.85□□□□□ -0.03
C4orf3-201ENST00000399075 NINLQ9Y2I6 1382 aa14.85□□□□□ -0.03
C4orf3-201ENST00000399075 TULP4Q9NRJ4 1543 aa14.84□□□□□ -0.03
C4orf3-201ENST00000399075 IQSEC2Q5JU85 1478 aa14.84□□□□□ -0.03
C4orf3-201ENST00000399075 VGFO15240 615 aaPredicted RBP14.84□□□□□ -0.03
C4orf3-201ENST00000399075 MORC1Q86VD1 984 aa14.83□□□□□ -0.03
C4orf3-201ENST00000399075 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.03
C4orf3-201ENST00000399075 CGNL1Q0VF96 1302 aa14.83□□□□□ -0.04
C4orf3-201ENST00000399075 ANKRD36BQ8N2N9 1353 aa14.82□□□□□ -0.04
C4orf3-201ENST00000399075 NCBP3Q53F19 620 aaKnown RBP14.82□□□□□ -0.04
C4orf3-201ENST00000399075 EVC2Q86UK5 1308 aa14.82□□□□□ -0.04
C4orf3-201ENST00000399075 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
C4orf3-201ENST00000399075 TMEM132EQ6IEE7 984 aa14.81□□□□□ -0.04
C4orf3-201ENST00000399075 WWC1Q8IX03 1113 aa14.8□□□□□ -0.04
C4orf3-201ENST00000399075 RUNDC1Q96C34 613 aa14.8□□□□□ -0.04
C4orf3-201ENST00000399075 PHF23Q9BUL5 403 aaPredicted RBP14.8□□□□□ -0.04
C4orf3-201ENST00000399075 SLC52A1Q9NWF4 448 aa14.8□□□□□ -0.04
C4orf3-201ENST00000399075 PREX1Q8TCU6 1659 aa14.79□□□□□ -0.04
C4orf3-201ENST00000399075 RAPGEF3O95398 923 aa14.79□□□□□ -0.04
C4orf3-201ENST00000399075 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
C4orf3-201ENST00000399075 TMEM131LA2VDJ0 1609 aa14.79□□□□□ -0.04
C4orf3-201ENST00000399075 DMRT2Q9Y5R5 561 aa14.78□□□□□ -0.04
C4orf3-201ENST00000399075 CCDC27Q2M243 656 aa14.77□□□□□ -0.04
C4orf3-201ENST00000399075 CFAP53Q96M91 514 aa14.77□□□□□ -0.04
C4orf3-201ENST00000399075 CLTCQ00610 1675 aaKnown RBP14.77□□□□□ -0.04
C4orf3-201ENST00000399075 NPM2Q86SE8 214 aaKnown RBP14.76□□□□□ -0.05
C4orf3-201ENST00000399075 ADGRB2O60241 1585 aa14.76□□□□□ -0.05
C4orf3-201ENST00000399075 BCAR3O75815 825 aa14.76□□□□□ -0.05
C4orf3-201ENST00000399075 WDR63Q8IWG1 891 aa14.76□□□□□ -0.05
C4orf3-201ENST00000399075 DDRGK1Q96HY6 314 aa14.76□□□□□ -0.05
C4orf3-201ENST00000399075 MYO5BQ9ULV0 1848 aa14.76□□□□□ -0.05
C4orf3-201ENST00000399075 YEATS2Q9ULM3 1422 aa14.75□□□□□ -0.05
C4orf3-201ENST00000399075 IDI1Q13907 227 aa14.75□□□□□ -0.05
C4orf3-201ENST00000399075 ABCC11Q96J66 1382 aa14.75□□□□□ -0.05
C4orf3-201ENST00000399075 ANKRD26Q9UPS8 1709 aa14.75□□□□□ -0.05
C4orf3-201ENST00000399075 MTHFSP49914 203 aa14.74□□□□□ -0.05
C4orf3-201ENST00000399075 MED14O60244 1454 aa14.74□□□□□ -0.05
C4orf3-201ENST00000399075 PTPRMP28827 1452 aa14.74□□□□□ -0.05
C4orf3-201ENST00000399075 AAMPQ13685 434 aa14.74□□□□□ -0.05
C4orf3-201ENST00000399075 FAM161AQ3B820 660 aa14.74□□□□□ -0.05
C4orf3-201ENST00000399075 TCP11L2Q8N4U5 519 aa14.73□□□□□ -0.05
C4orf3-201ENST00000399075 SKAP1Q86WV1 359 aa14.73□□□□□ -0.05
C4orf3-201ENST00000399075 ATAD2Q6PL18 1390 aa14.72□□□□□ -0.05
C4orf3-201ENST00000399075 NBR1Q14596 966 aa14.72□□□□□ -0.05
C4orf3-201ENST00000399075 IL27Q8NEV9 243 aa14.72□□□□□ -0.05
C4orf3-201ENST00000399075 REREQ9P2R6 1566 aa14.72□□□□□ -0.05
C4orf3-201ENST00000399075 VIRMAQ69YN4 1812 aaKnown RBP14.71□□□□□ -0.05
C4orf3-201ENST00000399075 TNNT2P45379 298 aaPredicted RBP14.71□□□□□ -0.05
C4orf3-201ENST00000399075 A0A1W2PP64 1363 aa14.71□□□□□ -0.05
C4orf3-201ENST00000399075 C8orf34Q49A92 452 aa14.7□□□□□ -0.06
C4orf3-201ENST00000399075 RTL5Q5HYW3 569 aaPredicted RBP14.7□□□□□ -0.06
C4orf3-201ENST00000399075 COL3A1P02461 1466 aaPredicted RBP14.7□□□□□ -0.06
C4orf3-201ENST00000399075 RARSP54136 660 aaKnown RBP14.7□□□□□ -0.06
C4orf3-201ENST00000399075 CABP2Q9NPB3 220 aa14.7□□□□□ -0.06
C4orf3-201ENST00000399075 YTHDC2Q9H6S0 1430 aaKnown RBP14.69□□□□□ -0.06
C4orf3-201ENST00000399075 NUTM2DQ5VT03 806 aaPredicted RBP14.69□□□□□ -0.06
C4orf3-201ENST00000399075 CLUAP1Q96AJ1 413 aa14.69□□□□□ -0.06
C4orf3-201ENST00000399075 USP35Q9P2H5 1018 aa14.68□□□□□ -0.06
C4orf3-201ENST00000399075 AGLP35573 1532 aa14.68□□□□□ -0.06
C4orf3-201ENST00000399075 MYH16Q9H6N6 1097 aa14.68□□□□□ -0.06
C4orf3-201ENST00000399075 ALKQ9UM73 1620 aa14.68□□□□□ -0.06
C4orf3-201ENST00000399075 NLRP1Q9C000 1473 aa14.68□□□□□ -0.06
C4orf3-201ENST00000399075 PPM1GO15355 546 aaPredicted RBP14.67□□□□□ -0.06
C4orf3-201ENST00000399075 CANXP27824 592 aaKnown RBP14.67□□□□□ -0.06
C4orf3-201ENST00000399075 CD163L1Q9NR16 1453 aa14.67□□□□□ -0.06
C4orf3-201ENST00000399075 RRP7AQ9Y3A4 280 aaKnown RBP14.67□□□□□ -0.06
C4orf3-201ENST00000399075 CT47B1P0C2W7 299 aaPredicted RBP14.67□□□□□ -0.06
C4orf3-201ENST00000399075 ZMYM3Q14202 1370 aa14.66□□□□□ -0.06
C4orf3-201ENST00000399075 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
C4orf3-201ENST00000399075 TERF2IPQ9NYB0 399 aa14.66□□□□□ -0.06
C4orf3-201ENST00000399075 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
C4orf3-201ENST00000399075 MAPK8IP3Q9UPT6 1336 aa14.66□□□□□ -0.06
C4orf3-201ENST00000399075 NEUROD2Q15784 382 aa14.65□□□□□ -0.06
C4orf3-201ENST00000399075 ARHGEF40Q8TER5 1519 aa14.65□□□□□ -0.06
C4orf3-201ENST00000399075 IGHDP01880 384 aa14.65□□□□□ -0.06
C4orf3-201ENST00000399075 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
C4orf3-201ENST00000399075 SRPK2P78362 688 aaKnown RBP14.65□□□□□ -0.06
C4orf3-201ENST00000399075 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
C4orf3-201ENST00000399075 PANK1Q8TE04 598 aa14.65□□□□□ -0.06
C4orf3-201ENST00000399075 KIF20BQ96Q89 1820 aa14.65□□□□□ -0.06
C4orf3-201ENST00000399075 AEBP2Q6ZN18 517 aaPredicted RBP14.64□□□□□ -0.07
C4orf3-201ENST00000399075 COG6Q9Y2V7 657 aa14.64□□□□□ -0.07
C4orf3-201ENST00000399075 DIP2BQ9P265 1576 aa14.64□□□□□ -0.07
C4orf3-201ENST00000399075 PMFBP1Q8TBY8 1022 aa14.64□□□□□ -0.07
C4orf3-201ENST00000399075 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
C4orf3-201ENST00000399075 RGS3P49796 1198 aa14.63□□□□□ -0.07
C4orf3-201ENST00000399075 PRAM1Q96QH2 718 aa14.63□□□□□ -0.07
C4orf3-201ENST00000399075 STK26Q9P289 416 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms