RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 PPM1GO15355 546 aaPredicted RBP17.01■□□□□ 0.31
PRAME-201ENST00000398741 FAM161AQ3B820 660 aa17.01■□□□□ 0.31
PRAME-201ENST00000398741 MORC1Q86VD1 984 aa17.01■□□□□ 0.31
PRAME-201ENST00000398741 NSD3Q9BZ95 1437 aa17.01■□□□□ 0.31
PRAME-201ENST00000398741 BCAR3O75815 825 aa17.01■□□□□ 0.31
PRAME-201ENST00000398741 NEFMP07197 916 aa17■□□□□ 0.31
PRAME-201ENST00000398741 GGT6Q6P531 493 aa16.99■□□□□ 0.31
PRAME-201ENST00000398741 C14orf93Q9H972 538 aaKnown RBP16.99■□□□□ 0.31
PRAME-201ENST00000398741 USP35Q9P2H5 1018 aa16.99■□□□□ 0.31
PRAME-201ENST00000398741 CANXP27824 592 aaKnown RBP16.98■□□□□ 0.31
PRAME-201ENST00000398741 RGS3P49796 1198 aa16.98■□□□□ 0.31
PRAME-201ENST00000398741 DAXXQ9UER7 740 aaPredicted RBP16.98■□□□□ 0.31
PRAME-201ENST00000398741 NPATQ14207 1427 aa16.98■□□□□ 0.31
PRAME-201ENST00000398741 TNNT2P45379 298 aaPredicted RBP16.97■□□□□ 0.31
PRAME-201ENST00000398741 DMRT2Q9Y5R5 561 aa16.97■□□□□ 0.31
PRAME-201ENST00000398741 WWC1Q8IX03 1113 aa16.97■□□□□ 0.31
PRAME-201ENST00000398741 SLC12A5Q9H2X9 1139 aa16.97■□□□□ 0.31
PRAME-201ENST00000398741 CGNL1Q0VF96 1302 aa16.96■□□□□ 0.31
PRAME-201ENST00000398741 RPGRIP1LQ68CZ1 1315 aa16.96■□□□□ 0.31
PRAME-201ENST00000398741 NINLQ9Y2I6 1382 aa16.96■□□□□ 0.31
PRAME-201ENST00000398741 C8orf34Q49A92 452 aa16.96■□□□□ 0.3
PRAME-201ENST00000398741 PDE3AQ14432 1141 aa16.95■□□□□ 0.3
PRAME-201ENST00000398741 TMEM132EQ6IEE7 984 aa16.95■□□□□ 0.3
PRAME-201ENST00000398741 RUNDC1Q96C34 613 aa16.95■□□□□ 0.3
PRAME-201ENST00000398741 NEUROD2Q15784 382 aa16.94■□□□□ 0.3
PRAME-201ENST00000398741 CFAP53Q96M91 514 aa16.93■□□□□ 0.3
PRAME-201ENST00000398741 QRICH2Q9H0J4 1663 aa16.93■□□□□ 0.3
PRAME-201ENST00000398741 ADGRB1O14514 1584 aa16.93■□□□□ 0.3
PRAME-201ENST00000398741 PPLO60437 1756 aa16.92■□□□□ 0.3
PRAME-201ENST00000398741 SIGLEC1Q9BZZ2 1709 aa16.92■□□□□ 0.3
PRAME-201ENST00000398741 RRP7AQ9Y3A4 280 aaKnown RBP16.92■□□□□ 0.3
PRAME-201ENST00000398741 ZC3H13Q5T200 1668 aaKnown RBP16.91■□□□□ 0.3
PRAME-201ENST00000398741 TCP11L2Q8N4U5 519 aa16.9■□□□□ 0.3
PRAME-201ENST00000398741 CLUAP1Q96AJ1 413 aa16.9■□□□□ 0.3
PRAME-201ENST00000398741 EVC2Q86UK5 1308 aa16.9■□□□□ 0.3
PRAME-201ENST00000398741 FRAT1Q92837 279 aaPredicted RBP16.9■□□□□ 0.3
PRAME-201ENST00000398741 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
PRAME-201ENST00000398741 REREQ9P2R6 1566 aa16.89■□□□□ 0.3
PRAME-201ENST00000398741 SHPRHQ149N8 1683 aa16.89■□□□□ 0.29
PRAME-201ENST00000398741 MTHFSP49914 203 aa16.89■□□□□ 0.29
PRAME-201ENST00000398741 PANK1Q8TE04 598 aa16.89■□□□□ 0.29
PRAME-201ENST00000398741 ABCC3O15438 1527 aa16.89■□□□□ 0.29
PRAME-201ENST00000398741 IGHDP01880 384 aa16.89■□□□□ 0.29
PRAME-201ENST00000398741 ARHGEF40Q8TER5 1519 aa16.88■□□□□ 0.29
PRAME-201ENST00000398741 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
PRAME-201ENST00000398741 SLC4A3P48751 1232 aa16.88■□□□□ 0.29
PRAME-201ENST00000398741 WDR63Q8IWG1 891 aa16.88■□□□□ 0.29
PRAME-201ENST00000398741 USP32Q8NFA0 1604 aa16.88■□□□□ 0.29
PRAME-201ENST00000398741 IQSEC2Q5JU85 1478 aa16.88■□□□□ 0.29
PRAME-201ENST00000398741 PUS7Q96PZ0 661 aaKnown RBP16.88■□□□□ 0.29
PRAME-201ENST00000398741 NUTM2DQ5VT03 806 aaPredicted RBP16.87■□□□□ 0.29
PRAME-201ENST00000398741 RARSP54136 660 aaKnown RBP16.86■□□□□ 0.29
PRAME-201ENST00000398741 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
PRAME-201ENST00000398741 NSD2O96028 1365 aa16.86■□□□□ 0.29
PRAME-201ENST00000398741 ANKRD36BQ8N2N9 1353 aa16.86■□□□□ 0.29
PRAME-201ENST00000398741 PHF23Q9BUL5 403 aaPredicted RBP16.85■□□□□ 0.29
PRAME-201ENST00000398741 CCDC27Q2M243 656 aa16.85■□□□□ 0.29
PRAME-201ENST00000398741 AGLP35573 1532 aa16.84■□□□□ 0.29
PRAME-201ENST00000398741 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
PRAME-201ENST00000398741 AAMPQ13685 434 aa16.84■□□□□ 0.29
PRAME-201ENST00000398741 CAMSAP1Q5T5Y3 1602 aa16.84■□□□□ 0.29
PRAME-201ENST00000398741 MYH16Q9H6N6 1097 aa16.84■□□□□ 0.29
PRAME-201ENST00000398741 U2AF1L5P0DN76 240 aaPredicted RBP16.83■□□□□ 0.28
PRAME-201ENST00000398741 U2AF1Q01081 240 aaKnown RBP eCLIP16.83■□□□□ 0.282e-24■□□□□ 8.6
PRAME-201ENST00000398741 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
PRAME-201ENST00000398741 CABP2Q9NPB3 220 aa16.83■□□□□ 0.28
PRAME-201ENST00000398741 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
PRAME-201ENST00000398741 NFKBIBQ15653 356 aa16.82■□□□□ 0.28
PRAME-201ENST00000398741 SAFB2Q14151 953 aaKnown RBP eCLIP16.81■□□□□ 0.28
PRAME-201ENST00000398741 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
PRAME-201ENST00000398741 BCL2L13Q9BXK5 485 aa16.81■□□□□ 0.28
PRAME-201ENST00000398741 NEXMIFQ5QGS0 1516 aa16.81■□□□□ 0.28
PRAME-201ENST00000398741 ARHGEF28Q8N1W1 1705 aaKnown RBP16.8■□□□□ 0.28
PRAME-201ENST00000398741 PIK3C2BO00750 1634 aa16.79■□□□□ 0.28
PRAME-201ENST00000398741 SRPK2P78362 688 aaKnown RBP16.79■□□□□ 0.28
PRAME-201ENST00000398741 STK26Q9P289 416 aa16.78■□□□□ 0.28
PRAME-201ENST00000398741 RLBP1P12271 317 aa16.77■□□□□ 0.28
PRAME-201ENST00000398741 IDI1Q13907 227 aa16.77■□□□□ 0.28
PRAME-201ENST00000398741 SLC52A1Q9NWF4 448 aa16.77■□□□□ 0.27
PRAME-201ENST00000398741 TNNQ9UQP3 1299 aa16.77■□□□□ 0.27
PRAME-201ENST00000398741 ARHGAP31Q2M1Z3 1444 aa16.77■□□□□ 0.27
PRAME-201ENST00000398741 PCDHB15Q9Y5E8 787 aa16.76■□□□□ 0.27
PRAME-201ENST00000398741 A0A1W2PP64 1363 aa16.76■□□□□ 0.27
PRAME-201ENST00000398741 ABCC11Q96J66 1382 aa16.76■□□□□ 0.27
PRAME-201ENST00000398741 U2SURPO15042 1029 aaKnown RBP16.76■□□□□ 0.27
PRAME-201ENST00000398741 RWDD1Q9H446 243 aaPredicted RBP16.76■□□□□ 0.27
PRAME-201ENST00000398741 SENP3Q9H4L4 574 aaPredicted RBP16.75■□□□□ 0.27
PRAME-201ENST00000398741 ZFYVE9O95405 1425 aa16.75■□□□□ 0.27
PRAME-201ENST00000398741 CT47B1P0C2W7 299 aaPredicted RBP16.74■□□□□ 0.27
PRAME-201ENST00000398741 GSE1Q14687 1217 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
PRAME-201ENST00000398741 GGNBP2Q9H3C7 697 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 TERF2IPQ9NYB0 399 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 ADGRB2O60241 1585 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 CLTCQ00610 1675 aaKnown RBP16.74■□□□□ 0.27
PRAME-201ENST00000398741 USP19O94966 1318 aa16.74■□□□□ 0.27
PRAME-201ENST00000398741 MVPQ14764 893 aaKnown RBP16.73■□□□□ 0.27
PRAME-201ENST00000398741 UPF2Q9HAU5 1272 aaKnown RBP16.73■□□□□ 0.27
PRAME-201ENST00000398741 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms