RNA–Protein interactions for RNA: ENST00000398661.6

HMGCLL1-205, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 2,532 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-205ENST00000398661 GLIPR1L2Q4G1C9 344 aa13.26□□□□□ -0.29
HMGCLL1-205ENST00000398661 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
HMGCLL1-205ENST00000398661 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
HMGCLL1-205ENST00000398661 PRAM1Q96QH2 718 aa13.24□□□□□ -0.29
HMGCLL1-205ENST00000398661 PPLO60437 1756 aa13.24□□□□□ -0.29
HMGCLL1-205ENST00000398661 METP08581 1390 aa13.24□□□□□ -0.29
HMGCLL1-205ENST00000398661 KDM4FA0A1W2PPD8 638 aa13.24□□□□□ -0.29
HMGCLL1-205ENST00000398661 RPGRIP1LQ68CZ1 1315 aa13.23□□□□□ -0.29
HMGCLL1-205ENST00000398661 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 SLC4A3P48751 1232 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 DAXXQ9UER7 740 aaPredicted RBP13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 TMEM2Q9UHN6 1383 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 PLEKHH1Q9ULM0 1364 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 MYOM2P54296 1465 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 IFT172Q9UG01 1749 aa13.22□□□□□ -0.29
HMGCLL1-205ENST00000398661 TMC1Q8TDI8 760 aa13.21□□□□□ -0.29
HMGCLL1-205ENST00000398661 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
HMGCLL1-205ENST00000398661 PNISRQ8TF01 805 aaKnown RBP13.21□□□□□ -0.29
HMGCLL1-205ENST00000398661 CC2D1BQ5T0F9 858 aaKnown RBP13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 PANK3Q9H999 370 aa13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 POGKQ9P215 609 aa13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 CENPJQ9HC77 1338 aaPredicted RBP13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 TMF1P82094 1093 aa13.2□□□□□ -0.3
HMGCLL1-205ENST00000398661 PTPRMP28827 1452 aa13.19□□□□□ -0.3
HMGCLL1-205ENST00000398661 SLC12A5Q9H2X9 1139 aa13.19□□□□□ -0.3
HMGCLL1-205ENST00000398661 RCAN3Q9UKA8 241 aa13.19□□□□□ -0.3
HMGCLL1-205ENST00000398661 ZFYVE9O95405 1425 aa13.19□□□□□ -0.3
HMGCLL1-205ENST00000398661 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
HMGCLL1-205ENST00000398661 FRAT2O75474 233 aaPredicted RBP13.18□□□□□ -0.3
HMGCLL1-205ENST00000398661 ADGRB1O14514 1584 aa13.18□□□□□ -0.3
HMGCLL1-205ENST00000398661 THEMISQ8N1K5 641 aaPredicted RBP13.17□□□□□ -0.3
HMGCLL1-205ENST00000398661 ZMYND15Q9H091 742 aa13.17□□□□□ -0.3
HMGCLL1-205ENST00000398661 EID1Q9Y6B2 187 aa13.17□□□□□ -0.3
HMGCLL1-205ENST00000398661 VSIG10Q8N0Z9 540 aa13.16□□□□□ -0.3
HMGCLL1-205ENST00000398661 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
HMGCLL1-205ENST00000398661 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
HMGCLL1-205ENST00000398661 STAC3Q96MF2 364 aa13.16□□□□□ -0.3
HMGCLL1-205ENST00000398661 ALKQ9UM73 1620 aa13.16□□□□□ -0.3
HMGCLL1-205ENST00000398661 RRAGDQ9NQL2 400 aaPredicted RBP13.15□□□□□ -0.3
HMGCLL1-205ENST00000398661 SKAP1Q86WV1 359 aa13.15□□□□□ -0.3
HMGCLL1-205ENST00000398661 YTHDC2Q9H6S0 1430 aaKnown RBP13.15□□□□□ -0.3
HMGCLL1-205ENST00000398661 ADAMTSL3P82987 1691 aa13.15□□□□□ -0.31
HMGCLL1-205ENST00000398661 TNNT2P45379 298 aaPredicted RBP13.14□□□□□ -0.31
HMGCLL1-205ENST00000398661 LRPPRCP42704 1394 aaKnown RBP13.14□□□□□ -0.31
HMGCLL1-205ENST00000398661 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.13□□□□□ -0.31
HMGCLL1-205ENST00000398661 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
HMGCLL1-205ENST00000398661 IQGAP1P46940 1657 aa13.13□□□□□ -0.31
HMGCLL1-205ENST00000398661 KCNA6P17658 529 aa13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 CARD14Q9BXL6 1004 aa13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 EIF3AQ14152 1382 aaKnown RBP13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 ROBO2Q9HCK4 1378 aa13.12□□□□□ -0.31
HMGCLL1-205ENST00000398661 MYO3AQ8NEV4 1616 aa13.11□□□□□ -0.31
HMGCLL1-205ENST00000398661 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
HMGCLL1-205ENST00000398661 PER1O15534 1290 aaPredicted RBP13.11□□□□□ -0.31
HMGCLL1-205ENST00000398661 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
HMGCLL1-205ENST00000398661 ANKLE2Q86XL3 938 aa13.1□□□□□ -0.31
HMGCLL1-205ENST00000398661 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
HMGCLL1-205ENST00000398661 PTPRUQ92729 1446 aa13.1□□□□□ -0.31
HMGCLL1-205ENST00000398661 HDGFP51858 240 aaKnown RBP13.1□□□□□ -0.31
HMGCLL1-205ENST00000398661 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
HMGCLL1-205ENST00000398661 PLEKHG5O94827 1062 aa13.09□□□□□ -0.31
HMGCLL1-205ENST00000398661 FBLN1P23142 703 aa13.09□□□□□ -0.31
HMGCLL1-205ENST00000398661 PDE3BQ13370 1112 aa13.09□□□□□ -0.31
HMGCLL1-205ENST00000398661 CRBNQ96SW2 442 aa13.08□□□□□ -0.32
HMGCLL1-205ENST00000398661 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
HMGCLL1-205ENST00000398661 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.32
HMGCLL1-205ENST00000398661 FAM161AQ3B820 660 aa13.08□□□□□ -0.32
HMGCLL1-205ENST00000398661 BRD4O60885 1362 aaPredicted RBP13.08□□□□□ -0.32
HMGCLL1-205ENST00000398661 RRP9O43818 475 aaKnown RBP13.07□□□□□ -0.32
HMGCLL1-205ENST00000398661 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
HMGCLL1-205ENST00000398661 PLIN1O60240 522 aa13.07□□□□□ -0.32
HMGCLL1-205ENST00000398661 NAP1L5Q96NT1 182 aaPredicted RBP13.07□□□□□ -0.32
HMGCLL1-205ENST00000398661 SETD1BQ9UPS6 1966 aaKnown RBP13.07□□□□□ -0.32
HMGCLL1-205ENST00000398661 C8orf34Q49A92 452 aa13.06□□□□□ -0.32
HMGCLL1-205ENST00000398661 PLEKHG1Q9ULL1 1385 aa13.06□□□□□ -0.32
HMGCLL1-205ENST00000398661 HSP90AA1P07900 732 aaKnown RBP13.06□□□□□ -0.32
HMGCLL1-205ENST00000398661 EVC2Q86UK5 1308 aa13.06□□□□□ -0.32
HMGCLL1-205ENST00000398661 KIAA1210Q9ULL0 1709 aa13.06□□□□□ -0.32
HMGCLL1-205ENST00000398661 KTN1Q86UP2 1357 aaKnown RBP13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 KNSTRNQ9Y448 316 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 LAMC1P11047 1609 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 TULP4Q9NRJ4 1543 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 SETBP1Q9Y6X0 1596 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 KDM2BQ8NHM5 1336 aa13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 MYBBP1AQ9BQG0 1328 aaKnown RBP13.05□□□□□ -0.32
HMGCLL1-205ENST00000398661 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
HMGCLL1-205ENST00000398661 PNNQ9H307 717 aaKnown RBP13.03□□□□□ -0.32
HMGCLL1-205ENST00000398661 C14orf37Q86TY3 774 aa13.03□□□□□ -0.32
HMGCLL1-205ENST00000398661 ARHGAP23Q9P227 1491 aa13.02□□□□□ -0.32
HMGCLL1-205ENST00000398661 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.32
HMGCLL1-205ENST00000398661 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.32
HMGCLL1-205ENST00000398661 ZRANB1Q9UGI0 708 aa13.02□□□□□ -0.32
HMGCLL1-205ENST00000398661 SETD1AO15047 1707 aaKnown RBP13.02□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms