RNA–Protein interactions for RNA: ENST00000398399.6

VGLL3-202, Transcript of vestigial like family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VGLL3, Length 10,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3-202ENST00000398399 CDC45O75419 566 aa16.46■□□□□ 0.23
VGLL3-202ENST00000398399 SOX12O15370 315 aa16.46■□□□□ 0.23
VGLL3-202ENST00000398399 STK11IPQ8N1F8 1099 aa16.46■□□□□ 0.23
VGLL3-202ENST00000398399 RAPGEF2Q9Y4G8 1499 aa16.46■□□□□ 0.22
VGLL3-202ENST00000398399 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.22
VGLL3-202ENST00000398399 ANKRD18AQ8IVF6 992 aa16.45■□□□□ 0.22
VGLL3-202ENST00000398399 MIA2Q96PC5 1412 aa16.45■□□□□ 0.22
VGLL3-202ENST00000398399 HSP90AB4PQ58FF6 505 aa16.45■□□□□ 0.22
VGLL3-202ENST00000398399 PRKCSHP14314 528 aaPredicted RBP16.45■□□□□ 0.22
VGLL3-202ENST00000398399 XBP1P17861 261 aa16.44■□□□□ 0.22
VGLL3-202ENST00000398399 ERICH2A1L162 156 aa16.44■□□□□ 0.22
VGLL3-202ENST00000398399 SAFB2Q14151 953 aaKnown RBP eCLIP16.44■□□□□ 0.22
VGLL3-202ENST00000398399 FOXD1Q16676 465 aa16.44■□□□□ 0.22
VGLL3-202ENST00000398399 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
VGLL3-202ENST00000398399 HSP90AB2PQ58FF8 381 aa16.44■□□□□ 0.22
VGLL3-202ENST00000398399 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
VGLL3-202ENST00000398399 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
VGLL3-202ENST00000398399 L3MBTL2Q969R5 705 aa16.43■□□□□ 0.22
VGLL3-202ENST00000398399 DHX16O60231 1041 aaKnown RBP16.43■□□□□ 0.22
VGLL3-202ENST00000398399 SDF4Q9BRK5 362 aa16.43■□□□□ 0.22
VGLL3-202ENST00000398399 NOL10Q9BSC4 688 aaKnown RBP16.43■□□□□ 0.22
VGLL3-202ENST00000398399 C9orf78Q9NZ63 289 aaPredicted RBP16.43■□□□□ 0.22
VGLL3-202ENST00000398399 FILIP1LQ4L180 1135 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 OFD1O75665 1012 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 PDILTQ8N807 584 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 SMC2O95347 1197 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 EVC2Q86UK5 1308 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 ZNF396Q96N95 335 aaPredicted RBP16.42■□□□□ 0.22
VGLL3-202ENST00000398399 CALCOCO1Q9P1Z2 691 aa16.42■□□□□ 0.22
VGLL3-202ENST00000398399 JMYQ8N9B5 988 aa16.41■□□□□ 0.22
VGLL3-202ENST00000398399 ZNHIT6Q9NWK9 470 aaKnown RBP16.41■□□□□ 0.22
VGLL3-202ENST00000398399 ANO8Q9HCE9 1232 aaPredicted RBP16.41■□□□□ 0.22
VGLL3-202ENST00000398399 PLIN1O60240 522 aa16.41■□□□□ 0.22
VGLL3-202ENST00000398399 MCM3P25205 808 aa16.41■□□□□ 0.22
VGLL3-202ENST00000398399 HIP1O00291 1037 aa16.41■□□□□ 0.22
VGLL3-202ENST00000398399 GRPEL1Q9HAV7 217 aa16.41■□□□□ 0.22
VGLL3-202ENST00000398399 FRAT2O75474 233 aaPredicted RBP16.4■□□□□ 0.22
VGLL3-202ENST00000398399 COG6Q9Y2V7 657 aa16.4■□□□□ 0.22
VGLL3-202ENST00000398399 PAK3O75914 559 aaPredicted RBP16.4■□□□□ 0.22
VGLL3-202ENST00000398399 EZRP15311 586 aaKnown RBP16.39■□□□□ 0.22
VGLL3-202ENST00000398399 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
VGLL3-202ENST00000398399 STK26Q9P289 416 aa16.39■□□□□ 0.21
VGLL3-202ENST00000398399 GIMAP7Q8NHV1 300 aa16.39■□□□□ 0.21
VGLL3-202ENST00000398399 CCDC43Q96MW1 224 aaKnown RBP16.39■□□□□ 0.21
VGLL3-202ENST00000398399 ESPNB1AK53 854 aa16.39■□□□□ 0.21
VGLL3-202ENST00000398399 MAP9Q49MG5 647 aa16.39■□□□□ 0.21
VGLL3-202ENST00000398399 CIZ1Q9ULV3 898 aaPredicted RBP16.39■□□□□ 0.21
VGLL3-202ENST00000398399 ZNF330Q9Y3S2 320 aaPredicted RBP16.39■□□□□ 0.21
VGLL3-202ENST00000398399 CBFA2T2O43439 604 aa16.38■□□□□ 0.21
VGLL3-202ENST00000398399 TXLNAP40222 546 aa16.38■□□□□ 0.21
VGLL3-202ENST00000398399 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
VGLL3-202ENST00000398399 MAGEC2Q9UBF1 373 aaPredicted RBP16.38■□□□□ 0.21
VGLL3-202ENST00000398399 DACH1Q9UI36 760 aa16.38■□□□□ 0.21
VGLL3-202ENST00000398399 RALYLQ86SE5 291 aaKnown RBP16.38■□□□□ 0.21
VGLL3-202ENST00000398399 PANK3Q9H999 370 aa16.37■□□□□ 0.21
VGLL3-202ENST00000398399 AK9Q5TCS8 1911 aa16.37■□□□□ 0.21
VGLL3-202ENST00000398399 CNTROBQ8N137 903 aa16.37■□□□□ 0.21
VGLL3-202ENST00000398399 SLC26A8Q96RN1 970 aa16.37■□□□□ 0.21
VGLL3-202ENST00000398399 G3V3G9 751 aa16.36■□□□□ 0.21
VGLL3-202ENST00000398399 DCAF8Q5TAQ9 597 aa16.36■□□□□ 0.21
VGLL3-202ENST00000398399 AMPHP49418 695 aa16.36■□□□□ 0.21
VGLL3-202ENST00000398399 SEPT7Q16181 437 aaKnown RBP16.36■□□□□ 0.21
VGLL3-202ENST00000398399 PDCL3Q9H2J4 239 aa16.36■□□□□ 0.21
VGLL3-202ENST00000398399 ENOX2Q16206 610 aaKnown RBP16.36■□□□□ 0.21
VGLL3-202ENST00000398399 CSB-PGBD3P0DP91 1061 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 ANKRD1Q15327 319 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 SETD1BQ9UPS6 1966 aaKnown RBP16.35■□□□□ 0.21
VGLL3-202ENST00000398399 STIM1Q13586 685 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 AEBP1Q8IUX7 1158 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 MROH2BQ7Z745 1585 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 DDX58O95786 925 aaKnown RBP16.35■□□□□ 0.21
VGLL3-202ENST00000398399 ZSCAN30Q86W11 494 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 KANK4Q5T7N3 995 aaPredicted RBP16.35■□□□□ 0.21
VGLL3-202ENST00000398399 RUNDC1Q96C34 613 aa16.35■□□□□ 0.21
VGLL3-202ENST00000398399 GBP2P32456 591 aaPredicted RBP16.35■□□□□ 0.21
VGLL3-202ENST00000398399 WDR33Q9C0J8 1336 aaKnown RBP16.35■□□□□ 0.21
VGLL3-202ENST00000398399 TRIM34Q9BYJ4 488 aa16.34■□□□□ 0.21
VGLL3-202ENST00000398399 GBP3Q9H0R5 595 aa16.34■□□□□ 0.21
VGLL3-202ENST00000398399 HECW1Q76N89 1606 aa16.34■□□□□ 0.21
VGLL3-202ENST00000398399 RRBP1Q9P2E9 1410 aaKnown RBP16.34■□□□□ 0.21
VGLL3-202ENST00000398399 ERICH3Q5RHP9 1530 aa16.33■□□□□ 0.21
VGLL3-202ENST00000398399 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.21
VGLL3-202ENST00000398399 POLA1P09884 1462 aaPredicted RBP16.33■□□□□ 0.21
VGLL3-202ENST00000398399 PLCD4Q9BRC7 762 aa16.33■□□□□ 0.21
VGLL3-202ENST00000398399 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.33■□□□□ 0.21
VGLL3-202ENST00000398399 G3BP1Q13283 466 aaKnown RBP eCLIP16.33■□□□□ 0.2
VGLL3-202ENST00000398399 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
VGLL3-202ENST00000398399 PPFIBP1Q86W92 1011 aa16.33■□□□□ 0.2
VGLL3-202ENST00000398399 RNF214Q8ND24 703 aa16.33■□□□□ 0.2
VGLL3-202ENST00000398399 CCDC7Q96M83 1385 aa16.33■□□□□ 0.2
VGLL3-202ENST00000398399 RRP7AQ9Y3A4 280 aaKnown RBP16.32■□□□□ 0.2
VGLL3-202ENST00000398399 RBM10P98175 930 aaKnown RBP16.32■□□□□ 0.2
VGLL3-202ENST00000398399 ST20-MTHFSA0A0A6YYL1 179 aa16.32■□□□□ 0.2
VGLL3-202ENST00000398399 GOLGA6L10A0A0M3HER8 536 aa16.32■□□□□ 0.2
VGLL3-202ENST00000398399 TNMDQ9H2S6 317 aa16.32■□□□□ 0.2
VGLL3-202ENST00000398399 SHTN1A0MZ66 631 aa16.32■□□□□ 0.2
VGLL3-202ENST00000398399 BCL2L13Q9BXK5 485 aa16.32■□□□□ 0.2
VGLL3-202ENST00000398399 CGNQ9P2M7 1197 aaKnown RBP16.32■□□□□ 0.2
VGLL3-202ENST00000398399 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
VGLL3-202ENST00000398399 LUZP1Q86V48 1076 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 212.7 ms