RNA–Protein interactions for RNA: ENST00000397954.6

UBE3A-202, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5 BASIC

Gene UBE3A, Length 2,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-202ENST00000397954 PDIA4P13667 645 aaKnown RBP5.66□□□□□ -1.5
UBE3A-202ENST00000397954 HNRNPMP52272 730 aaKnown RBP eCLIP5.66□□□□□ -1.55e-8■■■■□ 26.4
UBE3A-202ENST00000397954 LOC105371045A0A1W2PR82 267 aa5.65□□□□□ -1.5
UBE3A-202ENST00000397954 ZBTB7CA1YPR0 619 aa5.65□□□□□ -1.5
UBE3A-202ENST00000397954 LTBP4Q8N2S1 1624 aa5.65□□□□□ -1.5
UBE3A-202ENST00000397954 ALKQ9UM73 1620 aa5.65□□□□□ -1.5
UBE3A-202ENST00000397954 SCAF11Q99590 1463 aaKnown RBP5.65□□□□□ -1.5
UBE3A-202ENST00000397954 BARGINQ6ZT62 677 aa5.65□□□□□ -1.5
UBE3A-202ENST00000397954 E2F4Q16254 413 aa5.65□□□□□ -1.51
UBE3A-202ENST00000397954 NAIPQ13075 1403 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 RPGRIP1LQ68CZ1 1315 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 XRN1Q8IZH2 1706 aaKnown RBP5.64□□□□□ -1.51
UBE3A-202ENST00000397954 KANK4Q5T7N3 995 aaPredicted RBP5.64□□□□□ -1.51
UBE3A-202ENST00000397954 RASEFQ8IZ41 740 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 THEMISQ8N1K5 641 aaPredicted RBP5.64□□□□□ -1.51
UBE3A-202ENST00000397954 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.64□□□□□ -1.51
UBE3A-202ENST00000397954 FAM212AQ96EL1 285 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 SGIP1Q9BQI5 828 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 MYOM2P54296 1465 aa5.64□□□□□ -1.51
UBE3A-202ENST00000397954 SETD1AO15047 1707 aaKnown RBP5.63□□□□□ -1.51
UBE3A-202ENST00000397954 DCCP43146 1447 aa5.63□□□□□ -1.51
UBE3A-202ENST00000397954 CCDC82Q8N4S0 544 aa5.63□□□□□ -1.51
UBE3A-202ENST00000397954 PLEKHG1Q9ULL1 1385 aa5.63□□□□□ -1.51
UBE3A-202ENST00000397954 WASHC2CQ9Y4E1 1318 aa5.62□□□□□ -1.51
UBE3A-202ENST00000397954 MYO5BQ9ULV0 1848 aa5.62□□□□□ -1.51
UBE3A-202ENST00000397954 PPP1R37O75864 691 aa5.62□□□□□ -1.51
UBE3A-202ENST00000397954 RBM26Q5T8P6 1007 aaKnown RBP5.62□□□□□ -1.51
UBE3A-202ENST00000397954 ZNF777Q9ULD5 760 aaPredicted RBP5.62□□□□□ -1.51
UBE3A-202ENST00000397954 NPHP4O75161 1426 aaPredicted RBP5.61□□□□□ -1.51
UBE3A-202ENST00000397954 FAM117AQ9C073 453 aa5.61□□□□□ -1.51
UBE3A-202ENST00000397954 CLTCL1P53675 1640 aa5.61□□□□□ -1.51
UBE3A-202ENST00000397954 AK7Q96M32 723 aa5.61□□□□□ -1.51
UBE3A-202ENST00000397954 NEXMIFQ5QGS0 1516 aa5.61□□□□□ -1.51
UBE3A-202ENST00000397954 KIF3BO15066 747 aa5.61□□□□□ -1.51
UBE3A-202ENST00000397954 DLC1Q96QB1 1528 aa5.6□□□□□ -1.51
UBE3A-202ENST00000397954 MFRPQ9BY79 579 aa5.6□□□□□ -1.51
UBE3A-202ENST00000397954 MYT1LQ9UL68 1186 aa5.6□□□□□ -1.51
UBE3A-202ENST00000397954 TMEM2Q9UHN6 1383 aa5.6□□□□□ -1.51
UBE3A-202ENST00000397954 NRXN1Q9ULB1 1477 aa5.6□□□□□ -1.51
UBE3A-202ENST00000397954 CHRM1P11229 460 aaPredicted RBP5.6□□□□□ -1.51
UBE3A-202ENST00000397954 ZNF644Q9H582 1327 aaPredicted RBP5.59□□□□□ -1.51
UBE3A-202ENST00000397954 KIF1AQ12756 1690 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 ADGRB2O60241 1585 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 XIRP1Q702N8 1843 aaKnown RBP5.59□□□□□ -1.51
UBE3A-202ENST00000397954 CLUAP1Q96AJ1 413 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 NRXN3Q9Y4C0 1643 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 PTCH1Q13635 1447 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 SETD5Q9C0A6 1442 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 MNX1P50219 401 aaPredicted RBP5.59□□□□□ -1.51
UBE3A-202ENST00000397954 PDE4DQ08499 809 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 KCTD17Q8N5Z5 321 aa5.59□□□□□ -1.51
UBE3A-202ENST00000397954 ANKRD30BQ9BXX2 1392 aa5.58□□□□□ -1.52
UBE3A-202ENST00000397954 KRI1Q8N9T8 703 aaKnown RBP5.58□□□□□ -1.52
UBE3A-202ENST00000397954 TRIM66O15016 1216 aa5.58□□□□□ -1.52
UBE3A-202ENST00000397954 ANKLE2Q86XL3 938 aa5.58□□□□□ -1.52
UBE3A-202ENST00000397954 ITSN1Q15811 1721 aa5.58□□□□□ -1.52
UBE3A-202ENST00000397954 TECPR2O15040 1411 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 RNF39Q9H2S5 420 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 CDC42BPGQ6DT37 1551 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 MLLT3P42568 568 aaPredicted RBP5.57□□□□□ -1.52
UBE3A-202ENST00000397954 ZNF428Q96B54 188 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 PLSCR2Q9NRY7 297 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 EID1Q9Y6B2 187 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 ZNF316A6NFI3 1004 aaPredicted RBP5.57□□□□□ -1.52
UBE3A-202ENST00000397954 IGSF3O75054 1194 aa5.57□□□□□ -1.52
UBE3A-202ENST00000397954 AHDC1Q5TGY3 1603 aaPredicted RBP5.56□□□□□ -1.52
UBE3A-202ENST00000397954 SHPRHQ149N8 1683 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 PLEKHG3A1L390 1219 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 FBXO41Q8TF61 875 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 SIRT1Q96EB6 747 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 NCKAP5LQ9HCH0 1330 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 EIF3AQ14152 1382 aaKnown RBP5.56□□□□□ -1.52
UBE3A-202ENST00000397954 STRCP1A6NGW2 1772 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 NHSL1Q5SYE7 1610 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 RIMS2Q9UQ26 1411 aa5.56□□□□□ -1.52
UBE3A-202ENST00000397954 GPIHBP1Q8IV16 184 aa5.55□□□□□ -1.52
UBE3A-202ENST00000397954 RAD21O60216 631 aa5.55□□□□□ -1.52
UBE3A-202ENST00000397954 CLSPNQ9HAW4 1339 aa5.55□□□□□ -1.52
UBE3A-202ENST00000397954 NUP155O75694 1391 aa5.55□□□□□ -1.52
UBE3A-202ENST00000397954 ONECUT3O60422 494 aaPredicted RBP5.54□□□□□ -1.52
UBE3A-202ENST00000397954 DSG3P32926 999 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 GGT6Q6P531 493 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 TBX22Q9Y458 520 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 FAM135BQ49AJ0 1406 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 CCDC144AA2RUR9 1427 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 SPATA31E1Q6ZUB1 1445 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 AEBP1Q8IUX7 1158 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 NALCNQ8IZF0 1738 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 COL22A1Q8NFW1 1626 aaPredicted RBP5.54□□□□□ -1.52
UBE3A-202ENST00000397954 LRRC7Q96NW7 1537 aa5.54□□□□□ -1.52
UBE3A-202ENST00000397954 FAM50AQ14320 339 aaKnown RBP5.53□□□□□ -1.52
UBE3A-202ENST00000397954 SMYD5Q6GMV2 418 aa5.53□□□□□ -1.52
UBE3A-202ENST00000397954 BRD4O60885 1362 aaPredicted RBP5.53□□□□□ -1.52
UBE3A-202ENST00000397954 CREBZFQ9NS37 354 aa5.53□□□□□ -1.52
UBE3A-202ENST00000397954 FMN2Q9NZ56 1722 aa5.53□□□□□ -1.52
UBE3A-202ENST00000397954 LARP6Q9BRS8 491 aaKnown RBP5.53□□□□□ -1.52
UBE3A-202ENST00000397954 RRP7BPQ9NSQ0 103 aa5.53□□□□□ -1.52
UBE3A-202ENST00000397954 USP54Q70EL1 1684 aa5.52□□□□□ -1.53
UBE3A-202ENST00000397954 CFAP65Q6ZU64 1925 aaKnown RBP5.52□□□□□ -1.53
UBE3A-202ENST00000397954 MTMR7Q9Y216 660 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms