RNA–Protein interactions for RNA: ENST00000397559.3

PDZD2-201, Transcript of PDZ domain containing 2, humanhuman

TSL 1 (best)

Gene PDZD2, Length 900 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD2-201ENST00000397559 DDRGK1Q96HY6 314 aa12.1□□□□□ -0.47
PDZD2-201ENST00000397559 PCDHGC3Q9UN70 934 aa12.09□□□□□ -0.47
PDZD2-201ENST00000397559 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
PDZD2-201ENST00000397559 S1PR4O95977 384 aa12.08□□□□□ -0.48
PDZD2-201ENST00000397559 MYSM1Q5VVJ2 828 aa12.08□□□□□ -0.48
PDZD2-201ENST00000397559 SYMPKQ92797 1274 aaKnown RBP12.08□□□□□ -0.48
PDZD2-201ENST00000397559 SLC6A16Q9GZN6 736 aa12.08□□□□□ -0.48
PDZD2-201ENST00000397559 GGCXP38435 758 aa12.07□□□□□ -0.48
PDZD2-201ENST00000397559 RSBN1LQ6PCB5 846 aaPredicted RBP12.07□□□□□ -0.48
PDZD2-201ENST00000397559 RIC3Q7Z5B4 369 aa12.07□□□□□ -0.48
PDZD2-201ENST00000397559 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.07□□□□□ -0.48
PDZD2-201ENST00000397559 PLEKHG3A1L390 1219 aa12.06□□□□□ -0.48
PDZD2-201ENST00000397559 C6orf229H3BNL8 230 aa12.06□□□□□ -0.48
PDZD2-201ENST00000397559 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
PDZD2-201ENST00000397559 CSPP1Q1MSJ5 1256 aa12.05□□□□□ -0.48
PDZD2-201ENST00000397559 USB1Q9BQ65 265 aaKnown RBP12.05□□□□□ -0.48
PDZD2-201ENST00000397559 RSPH6AQ9H0K4 717 aa12.05□□□□□ -0.48
PDZD2-201ENST00000397559 SPTLC1O15269 473 aa12.04□□□□□ -0.48
PDZD2-201ENST00000397559 IL27Q8NEV9 243 aa12.04□□□□□ -0.48
PDZD2-201ENST00000397559 PRDM9Q9NQV7 894 aa12.04□□□□□ -0.48
PDZD2-201ENST00000397559 POLR3EQ9NVU0 708 aa12.04□□□□□ -0.48
PDZD2-201ENST00000397559 DCAF1Q9Y4B6 1507 aa12.03□□□□□ -0.48
PDZD2-201ENST00000397559 LIMD1Q9UGP4 676 aa12.03□□□□□ -0.48
PDZD2-201ENST00000397559 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
PDZD2-201ENST00000397559 CC2D2AQ9P2K1 1620 aa12.02□□□□□ -0.49
PDZD2-201ENST00000397559 RNF223E7ERA6 249 aa12.02□□□□□ -0.49
PDZD2-201ENST00000397559 PPEF1O14829 653 aaPredicted RBP12.02□□□□□ -0.49
PDZD2-201ENST00000397559 GJA5P36382 358 aa12.02□□□□□ -0.49
PDZD2-201ENST00000397559 CECR2Q9BXF3 1484 aa12.02□□□□□ -0.49
PDZD2-201ENST00000397559 CLK2P49760 499 aaKnown RBP12.01□□□□□ -0.49
PDZD2-201ENST00000397559 MSS51Q4VC12 460 aa12.01□□□□□ -0.49
PDZD2-201ENST00000397559 MTMR2Q13614 643 aa12□□□□□ -0.49
PDZD2-201ENST00000397559 RETREG3Q86VR2 466 aa12□□□□□ -0.49
PDZD2-201ENST00000397559 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
PDZD2-201ENST00000397559 SH3D19Q5HYK7 790 aa11.98□□□□□ -0.49
PDZD2-201ENST00000397559 CABLES1Q8TDN4 633 aa11.98□□□□□ -0.49
PDZD2-201ENST00000397559 HRCP23327 699 aa11.97□□□□□ -0.49
PDZD2-201ENST00000397559 SKIV2LQ15477 1246 aaKnown RBP11.97□□□□□ -0.49
PDZD2-201ENST00000397559 ZBTB3Q9H5J0 574 aa11.97□□□□□ -0.49
PDZD2-201ENST00000397559 QPCTQ16769 361 aa11.96□□□□□ -0.49
PDZD2-201ENST00000397559 ANKLE1Q8NAG6 615 aa11.96□□□□□ -0.49
PDZD2-201ENST00000397559 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 NUTM2DQ5VT03 806 aaPredicted RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 PRPF38BQ5VTL8 546 aaKnown RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 PROCA1Q8NCQ7 364 aaPredicted RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 PRR7Q8TB68 274 aa11.95□□□□□ -0.5
PDZD2-201ENST00000397559 FCF1Q9Y324 198 aaKnown RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 EIF4G1Q04637 1599 aaKnown RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 ZCCHC6Q5VYS8 1495 aaKnown RBP11.95□□□□□ -0.5
PDZD2-201ENST00000397559 SPDYE5A6NIY4 337 aa11.94□□□□□ -0.5
PDZD2-201ENST00000397559 MMP16P51512 607 aa11.94□□□□□ -0.5
PDZD2-201ENST00000397559 TUSC1Q2TAM9 212 aa11.94□□□□□ -0.5
PDZD2-201ENST00000397559 RGS20O76081 388 aa11.93□□□□□ -0.5
PDZD2-201ENST00000397559 DXOO77932 396 aaKnown RBP11.93□□□□□ -0.5
PDZD2-201ENST00000397559 JUNDP17535 347 aa11.93□□□□□ -0.5
PDZD2-201ENST00000397559 PRKD2Q9BZL6 878 aa11.93□□□□□ -0.5
PDZD2-201ENST00000397559 LILRB3O75022 631 aa11.92□□□□□ -0.5
PDZD2-201ENST00000397559 TMEM132AQ24JP5 1023 aa11.91□□□□□ -0.5
PDZD2-201ENST00000397559 PLA2G2CQ5R387 149 aa11.91□□□□□ -0.5
PDZD2-201ENST00000397559 CFAP99D6REC4 459 aa11.9□□□□□ -0.5
PDZD2-201ENST00000397559 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.5
PDZD2-201ENST00000397559 TSC1Q92574 1164 aa11.9□□□□□ -0.5
PDZD2-201ENST00000397559 CCDC24Q8N4L8 307 aa11.89□□□□□ -0.51
PDZD2-201ENST00000397559 PCMTD1Q96MG8 357 aaPredicted RBP11.89□□□□□ -0.51
PDZD2-201ENST00000397559 EMID1Q96A84 441 aaPredicted RBP11.88□□□□□ -0.51
PDZD2-201ENST00000397559 SLC19A1P41440 591 aa11.87□□□□□ -0.51
PDZD2-201ENST00000397559 LIAT1Q6ZQX7 453 aa11.87□□□□□ -0.51
PDZD2-201ENST00000397559 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.87□□□□□ -0.51
PDZD2-201ENST00000397559 GOPCQ9HD26 462 aa11.87□□□□□ -0.51
PDZD2-201ENST00000397559 NUDT12Q9BQG2 462 aa11.86□□□□□ -0.51
PDZD2-201ENST00000397559 V9GY48 417 aaPredicted RBP11.86□□□□□ -0.51
PDZD2-201ENST00000397559 FBXO31Q5XUX0 539 aaPredicted RBP11.85□□□□□ -0.51
PDZD2-201ENST00000397559 DESI1Q6ICB0 168 aa11.85□□□□□ -0.51
PDZD2-201ENST00000397559 SCRIBQ14160 1630 aa11.83□□□□□ -0.52
PDZD2-201ENST00000397559 ZBTB24O43167 697 aaPredicted RBP11.83□□□□□ -0.52
PDZD2-201ENST00000397559 PTPRNQ16849 979 aa11.83□□□□□ -0.52
PDZD2-201ENST00000397559 CCNYL3P0C7X3 344 aa11.82□□□□□ -0.52
PDZD2-201ENST00000397559 HELBQ8NG08 1087 aaPredicted RBP11.82□□□□□ -0.52
PDZD2-201ENST00000397559 LYPD8Q6UX82 237 aa11.81□□□□□ -0.52
PDZD2-201ENST00000397559 PER1O15534 1290 aaPredicted RBP11.8□□□□□ -0.52
PDZD2-201ENST00000397559 RPIAP49247 311 aa11.8□□□□□ -0.52
PDZD2-201ENST00000397559 SPRYD7Q5W111 196 aa11.8□□□□□ -0.52
PDZD2-201ENST00000397559 PPP2R2DQ66LE6 453 aa11.8□□□□□ -0.52
PDZD2-201ENST00000397559 GTF3C3Q9Y5Q9 886 aa11.79□□□□□ -0.52
PDZD2-201ENST00000397559 CTHP32929 405 aa11.78□□□□□ -0.52
PDZD2-201ENST00000397559 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
PDZD2-201ENST00000397559 AP1G2O75843 785 aa11.77□□□□□ -0.53
PDZD2-201ENST00000397559 CD2BP2O95400 341 aaKnown RBP11.77□□□□□ -0.53
PDZD2-201ENST00000397559 RFC5P40937 340 aa11.77□□□□□ -0.53
PDZD2-201ENST00000397559 CTDSPL2Q05D32 466 aa11.77□□□□□ -0.53
PDZD2-201ENST00000397559 ZNF697Q5TEC3 545 aa11.77□□□□□ -0.53
PDZD2-201ENST00000397559 EVA1BQ9NVM1 165 aa11.77□□□□□ -0.53
PDZD2-201ENST00000397559 KCNH2Q12809 1159 aa11.76□□□□□ -0.53
PDZD2-201ENST00000397559 ZNF598Q86UK7 904 aaKnown RBP11.76□□□□□ -0.53
PDZD2-201ENST00000397559 TRIM32Q13049 653 aa11.75□□□□□ -0.53
PDZD2-201ENST00000397559 MAP10Q9P2G4 905 aa11.75□□□□□ -0.53
PDZD2-201ENST00000397559 UNC93B1Q9H1C4 597 aa11.73□□□□□ -0.53
PDZD2-201ENST00000397559 F12P00748 615 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms