RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 UBAP1LF5GYI3 381 aa33.23■■■□□ 2.91
TSPAN4-203ENST00000397397 QRICH2Q9H0J4 1663 aa33.21■■■□□ 2.91
TSPAN4-203ENST00000397397 RBM33Q96EV2 1170 aaKnown RBP33.2■■■□□ 2.91
TSPAN4-203ENST00000397397 HIRIP3Q9BW71 556 aaPredicted RBP33.17■■■□□ 2.9
TSPAN4-203ENST00000397397 TMEM94Q12767 1356 aa33.16■■■□□ 2.9
TSPAN4-203ENST00000397397 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.15■■■□□ 2.9
TSPAN4-203ENST00000397397 XIRP1Q702N8 1843 aaKnown RBP33.14■■■□□ 2.9
TSPAN4-203ENST00000397397 MINK1Q8N4C8 1332 aaPredicted RBP33.14■■■□□ 2.9
TSPAN4-203ENST00000397397 C14orf37Q86TY3 774 aa33.13■■■□□ 2.89
TSPAN4-203ENST00000397397 NCOA3Q9Y6Q9 1424 aa33.1■■■□□ 2.89
TSPAN4-203ENST00000397397 NALCNQ8IZF0 1738 aa33.1■■■□□ 2.89
TSPAN4-203ENST00000397397 TESK2Q96S53 571 aa33.1■■■□□ 2.89
TSPAN4-203ENST00000397397 SBNO2Q9Y2G9 1366 aa33.1■■■□□ 2.89
TSPAN4-203ENST00000397397 ADGRL3Q9HAR2 1447 aa33.08■■■□□ 2.89
TSPAN4-203ENST00000397397 TOM1O60784 492 aa33.08■■■□□ 2.89
TSPAN4-203ENST00000397397 ADGRB2O60241 1585 aa33.04■■■□□ 2.88
TSPAN4-203ENST00000397397 PIP4K2BP78356 416 aa33.04■■■□□ 2.88
TSPAN4-203ENST00000397397 SLC24A1O60721 1099 aa33.03■■■□□ 2.88
TSPAN4-203ENST00000397397 SCAF1Q9H7N4 1312 aaKnown RBP33.02■■■□□ 2.88
TSPAN4-203ENST00000397397 C19orf44Q9H6X5 657 aa33.02■■■□□ 2.88
TSPAN4-203ENST00000397397 EVC2Q86UK5 1308 aa33.01■■■□□ 2.87
TSPAN4-203ENST00000397397 TMF1P82094 1093 aa33.01■■■□□ 2.87
TSPAN4-203ENST00000397397 TULP4Q9NRJ4 1543 aa33■■■□□ 2.87
TSPAN4-203ENST00000397397 MSH6P52701 1360 aa33■■■□□ 2.87
TSPAN4-203ENST00000397397 WASLO00401 505 aaPredicted RBP32.99■■■□□ 2.87
TSPAN4-203ENST00000397397 CDC42BPGQ6DT37 1551 aa32.99■■■□□ 2.87
TSPAN4-203ENST00000397397 CDK19Q9BWU1 502 aa32.97■■■□□ 2.87
TSPAN4-203ENST00000397397 DISP3Q9P2K9 1392 aa32.97■■■□□ 2.87
TSPAN4-203ENST00000397397 ATF3P18847 181 aa32.94■■■□□ 2.86
TSPAN4-203ENST00000397397 SRPK2P78362 688 aaKnown RBP32.94■■■□□ 2.86
TSPAN4-203ENST00000397397 DCCP43146 1447 aa32.93■■■□□ 2.86
TSPAN4-203ENST00000397397 FMN2Q9NZ56 1722 aa32.93■■■□□ 2.86
TSPAN4-203ENST00000397397 CABP2Q9NPB3 220 aa32.92■■■□□ 2.86
TSPAN4-203ENST00000397397 C11orf95C9JLR9 678 aaPredicted RBP32.9■■■□□ 2.86
TSPAN4-203ENST00000397397 CDCA8Q53HL2 280 aa32.9■■■□□ 2.86
TSPAN4-203ENST00000397397 CADPS2Q86UW7 1296 aa32.9■■■□□ 2.86
TSPAN4-203ENST00000397397 NUTM2FA1L443 756 aa32.89■■■□□ 2.86
TSPAN4-203ENST00000397397 HSPA1LP34931 641 aa32.87■■■□□ 2.85
TSPAN4-203ENST00000397397 POLR3GLQ9BT43 218 aa32.87■■■□□ 2.85
TSPAN4-203ENST00000397397 PUS7Q96PZ0 661 aaKnown RBP32.85■■■□□ 2.85
TSPAN4-203ENST00000397397 ZNF316A6NFI3 1004 aaPredicted RBP32.84■■■□□ 2.85
TSPAN4-203ENST00000397397 NUDT16Q96DE0 195 aaKnown RBP32.84■■■□□ 2.85
TSPAN4-203ENST00000397397 USP32Q8NFA0 1604 aa32.83■■■□□ 2.85
TSPAN4-203ENST00000397397 KIF7Q2M1P5 1343 aa32.83■■■□□ 2.85
TSPAN4-203ENST00000397397 PRR36Q9H6K5 1346 aa32.83■■■□□ 2.85
TSPAN4-203ENST00000397397 ANKARQ7Z5J8 1434 aa32.82■■■□□ 2.84
TSPAN4-203ENST00000397397 RGPD8O14715 1765 aaPredicted RBP32.82■■■□□ 2.84
TSPAN4-203ENST00000397397 ATP7BP35670 1465 aa32.82■■■□□ 2.84
TSPAN4-203ENST00000397397 MST1RQ04912 1400 aa32.81■■■□□ 2.84
TSPAN4-203ENST00000397397 ATAD2Q6PL18 1390 aa32.81■■■□□ 2.84
TSPAN4-203ENST00000397397 CCDC7Q96M83 1385 aa32.81■■■□□ 2.84
TSPAN4-203ENST00000397397 WASHC2AQ641Q2 1341 aa32.79■■■□□ 2.84
TSPAN4-203ENST00000397397 C1orf167Q5SNV9 1468 aa32.79■■■□□ 2.84
TSPAN4-203ENST00000397397 ITSN1Q15811 1721 aa32.78■■■□□ 2.84
TSPAN4-203ENST00000397397 SLAIN2Q9P270 581 aa32.77■■■□□ 2.84
TSPAN4-203ENST00000397397 CCDC61Q9Y6R9 512 aa32.77■■■□□ 2.84
TSPAN4-203ENST00000397397 TOPAZ1Q8N9V7 1692 aa32.76■■■□□ 2.83
TSPAN4-203ENST00000397397 TMC1Q8TDI8 760 aa32.75■■■□□ 2.83
TSPAN4-203ENST00000397397 PPIP5K1Q6PFW1 1433 aa32.73■■■□□ 2.83
TSPAN4-203ENST00000397397 ESCO1Q5FWF5 840 aa32.73■■■□□ 2.83
TSPAN4-203ENST00000397397 ROBO1Q9Y6N7 1651 aa32.71■■■□□ 2.83
TSPAN4-203ENST00000397397 CABP1Q9NZU7 370 aa32.71■■■□□ 2.83
TSPAN4-203ENST00000397397 MYOM1P52179 1685 aa32.7■■■□□ 2.83
TSPAN4-203ENST00000397397 ORAI2Q96SN7 254 aa32.7■■■□□ 2.83
TSPAN4-203ENST00000397397 SLC12A5Q9H2X9 1139 aa32.69■■■□□ 2.82
TSPAN4-203ENST00000397397 PHF8Q9UPP1 1060 aa32.68■■■□□ 2.82
TSPAN4-203ENST00000397397 NINLQ9Y2I6 1382 aa32.68■■■□□ 2.82
TSPAN4-203ENST00000397397 PMFBP1Q8TBY8 1022 aa32.68■■■□□ 2.82
TSPAN4-203ENST00000397397 PLEKHG3A1L390 1219 aa32.66■■■□□ 2.82
TSPAN4-203ENST00000397397 KIF1AQ12756 1690 aa32.65■■■□□ 2.82
TSPAN4-203ENST00000397397 BRINP3Q76B58 766 aa32.63■■■□□ 2.81
TSPAN4-203ENST00000397397 NGDNQ8NEJ9 315 aaKnown RBP32.61■■■□□ 2.81
TSPAN4-203ENST00000397397 ACEP12821 1306 aa32.61■■■□□ 2.81
TSPAN4-203ENST00000397397 TERF2IPQ9NYB0 399 aa32.6■■■□□ 2.81
TSPAN4-203ENST00000397397 HDGFL2Q7Z4V5 671 aaPredicted RBP32.59■■■□□ 2.81
TSPAN4-203ENST00000397397 CD163L1Q9NR16 1453 aa32.58■■■□□ 2.81
TSPAN4-203ENST00000397397 POLR3AO14802 1390 aaPredicted RBP32.57■■■□□ 2.8
TSPAN4-203ENST00000397397 AKAP12Q02952 1782 aa32.57■■■□□ 2.8
TSPAN4-203ENST00000397397 ANKRD36BQ8N2N9 1353 aa32.56■■■□□ 2.8
TSPAN4-203ENST00000397397 FOXO3O43524 673 aa32.56■■■□□ 2.8
TSPAN4-203ENST00000397397 PANK3Q9H999 370 aa32.55■■■□□ 2.8
TSPAN4-203ENST00000397397 A0A1W2PP64 1363 aa32.55■■■□□ 2.8
TSPAN4-203ENST00000397397 CPSF1Q10570 1443 aaKnown RBP32.54■■■□□ 2.8
TSPAN4-203ENST00000397397 DDX10Q13206 875 aaKnown RBP32.54■■■□□ 2.8
TSPAN4-203ENST00000397397 ZNF692Q9BU19 519 aaPredicted RBP32.53■■■□□ 2.8
TSPAN4-203ENST00000397397 PSME1Q06323 249 aa32.52■■■□□ 2.8
TSPAN4-203ENST00000397397 DDX17Q92841 729 aaKnown RBP32.52■■■□□ 2.8
TSPAN4-203ENST00000397397 KTN1Q86UP2 1357 aaKnown RBP32.52■■■□□ 2.8
TSPAN4-203ENST00000397397 MON2Q7Z3U7 1717 aa32.51■■■□□ 2.79
TSPAN4-203ENST00000397397 NPHP3Q7Z494 1330 aa32.51■■■□□ 2.79
TSPAN4-203ENST00000397397 PHLPP1O60346 1717 aa32.5■■■□□ 2.79
TSPAN4-203ENST00000397397 NHSL1Q5SYE7 1610 aa32.49■■■□□ 2.79
TSPAN4-203ENST00000397397 MED1Q15648 1581 aaPredicted RBP32.49■■■□□ 2.79
TSPAN4-203ENST00000397397 XPCQ01831 940 aaPredicted RBP32.48■■■□□ 2.79
TSPAN4-203ENST00000397397 KRT28Q7Z3Y7 464 aa32.48■■■□□ 2.79
TSPAN4-203ENST00000397397 USP6P35125 1406 aa32.48■■■□□ 2.79
TSPAN4-203ENST00000397397 CARD14Q9BXL6 1004 aa32.46■■■□□ 2.79
TSPAN4-203ENST00000397397 COL16A1Q07092 1604 aaPredicted RBP32.44■■■□□ 2.78
TSPAN4-203ENST00000397397 NSD3Q9BZ95 1437 aa32.44■■■□□ 2.78
TSPAN4-203ENST00000397397 AHDC1Q5TGY3 1603 aaPredicted RBP32.43■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms