RNA–Protein interactions for RNA: ENST00000397381.4

UCA1-201, Transcript of urothelial cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene UCA1, Length 2,299 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCA1-201ENST00000397381 KANK1Q14678 1352 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 MCM4P33991 863 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 NCBP3Q53F19 620 aaKnown RBP11.85□□□□□ -0.51
UCA1-201ENST00000397381 SBNO2Q9Y2G9 1366 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 PCDHB15Q9Y5E8 787 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 MAP3K4Q9Y6R4 1608 aa11.85□□□□□ -0.51
UCA1-201ENST00000397381 RTEL1-TNFRSF6BF6WH68 1400 aa11.84□□□□□ -0.51
UCA1-201ENST00000397381 EFCAB2Q5VUJ9 269 aa11.84□□□□□ -0.51
UCA1-201ENST00000397381 CHMP5Q9NZZ3 219 aa11.84□□□□□ -0.51
UCA1-201ENST00000397381 CCDC27Q2M243 656 aa11.84□□□□□ -0.51
UCA1-201ENST00000397381 ABCA6Q8N139 1617 aa11.83□□□□□ -0.52
UCA1-201ENST00000397381 XRCC6P12956 609 aaKnown RBP eCLIP11.83□□□□□ -0.52
UCA1-201ENST00000397381 ISY1Q9ULR0 285 aaKnown RBP11.82□□□□□ -0.52
UCA1-201ENST00000397381 VWDEQ8N2E2 1590 aa11.82□□□□□ -0.52
UCA1-201ENST00000397381 USP32Q8NFA0 1604 aa11.82□□□□□ -0.52
UCA1-201ENST00000397381 RLBP1P12271 317 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 CLCN1P35523 988 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 TRAPPC8Q9Y2L5 1435 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 MYH16Q9H6N6 1097 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 IFT172Q9UG01 1749 aa11.81□□□□□ -0.52
UCA1-201ENST00000397381 ZFYVE16Q7Z3T8 1539 aa11.8□□□□□ -0.52
UCA1-201ENST00000397381 MRE11P49959 708 aa11.8□□□□□ -0.52
UCA1-201ENST00000397381 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
UCA1-201ENST00000397381 MORC1Q86VD1 984 aa11.8□□□□□ -0.52
UCA1-201ENST00000397381 C22orf23Q9BZE7 217 aa11.8□□□□□ -0.52
UCA1-201ENST00000397381 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
UCA1-201ENST00000397381 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
UCA1-201ENST00000397381 CT47B1P0C2W7 299 aaPredicted RBP11.8□□□□□ -0.52
UCA1-201ENST00000397381 PNNQ9H307 717 aaKnown RBP11.8□□□□□ -0.52
UCA1-201ENST00000397381 KIF1BO60333 1816 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 TRAK2O60296 914 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 ADGRL1O94910 1474 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 ARAP3Q8WWN8 1544 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 NSD3Q9BZ95 1437 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 SETBP1Q9Y6X0 1596 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 CFAP70Q5T0N1 1121 aa11.79□□□□□ -0.52
UCA1-201ENST00000397381 ZNF518AQ6AHZ1 1483 aa11.78□□□□□ -0.52
UCA1-201ENST00000397381 NRXN1Q9ULB1 1477 aa11.78□□□□□ -0.52
UCA1-201ENST00000397381 GLIPR1L2Q4G1C9 344 aa11.78□□□□□ -0.52
UCA1-201ENST00000397381 ZKSCAN2Q63HK3 967 aa11.78□□□□□ -0.52
UCA1-201ENST00000397381 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
UCA1-201ENST00000397381 HDAC1Q13547 482 aaPredicted RBP11.77□□□□□ -0.52
UCA1-201ENST00000397381 TNNQ9UQP3 1299 aa11.77□□□□□ -0.52
UCA1-201ENST00000397381 ZC3H13Q5T200 1668 aaKnown RBP11.77□□□□□ -0.53
UCA1-201ENST00000397381 NEUROD2Q15784 382 aa11.77□□□□□ -0.53
UCA1-201ENST00000397381 HSCBQ8IWL3 235 aa11.77□□□□□ -0.53
UCA1-201ENST00000397381 DZIP1LQ8IYY4 767 aaKnown RBP11.77□□□□□ -0.53
UCA1-201ENST00000397381 RRP7AQ9Y3A4 280 aaKnown RBP11.77□□□□□ -0.53
UCA1-201ENST00000397381 NCOA3Q9Y6Q9 1424 aa11.76□□□□□ -0.53
UCA1-201ENST00000397381 ADGRB2O60241 1585 aa11.76□□□□□ -0.53
UCA1-201ENST00000397381 FTSJ3Q8IY81 847 aaKnown RBP11.76□□□□□ -0.53
UCA1-201ENST00000397381 NAP1L5Q96NT1 182 aaPredicted RBP11.76□□□□□ -0.53
UCA1-201ENST00000397381 PTMSP20962 102 aa11.75□□□□□ -0.53
UCA1-201ENST00000397381 GZF1Q9H116 711 aaPredicted RBP11.75□□□□□ -0.53
UCA1-201ENST00000397381 ADGRF5Q8IZF2 1346 aa11.75□□□□□ -0.53
UCA1-201ENST00000397381 ZCCHC11Q5TAX3 1644 aaKnown RBP11.75□□□□□ -0.53
UCA1-201ENST00000397381 MFAP1P55081 439 aaKnown RBP11.75□□□□□ -0.53
UCA1-201ENST00000397381 SPRYD3Q8NCJ5 442 aa11.75□□□□□ -0.53
UCA1-201ENST00000397381 BCL2L13Q9BXK5 485 aa11.75□□□□□ -0.53
UCA1-201ENST00000397381 PANK2Q9BZ23 570 aa11.75□□□□□ -0.53
UCA1-201ENST00000397381 CIZ1Q9ULV3 898 aaPredicted RBP11.75□□□□□ -0.53
UCA1-201ENST00000397381 INO80Q9ULG1 1556 aaPredicted RBP11.75□□□□□ -0.53
UCA1-201ENST00000397381 SNX21Q969T3 373 aa11.74□□□□□ -0.53
UCA1-201ENST00000397381 ZNF692Q9BU19 519 aaPredicted RBP11.74□□□□□ -0.53
UCA1-201ENST00000397381 GRPEL1Q9HAV7 217 aa11.74□□□□□ -0.53
UCA1-201ENST00000397381 DDX19BQ9UMR2 479 aa11.74□□□□□ -0.53
UCA1-201ENST00000397381 QRICH2Q9H0J4 1663 aa11.74□□□□□ -0.53
UCA1-201ENST00000397381 CHD1O14646 1710 aa11.74□□□□□ -0.53
UCA1-201ENST00000397381 NSD2O96028 1365 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 ATP7AQ04656 1500 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 DDIT3P35638 169 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 RBM25P49756 843 aaKnown RBP11.73□□□□□ -0.53
UCA1-201ENST00000397381 SMC5Q8IY18 1101 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 ARXQ96QS3 562 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 UHRF1BP1LA0JNW5 1464 aa11.73□□□□□ -0.53
UCA1-201ENST00000397381 RRP9O43818 475 aaKnown RBP11.72□□□□□ -0.53
UCA1-201ENST00000397381 HSP90AA1P07900 732 aaKnown RBP11.72□□□□□ -0.53
UCA1-201ENST00000397381 MTHFSP49914 203 aa11.72□□□□□ -0.53
UCA1-201ENST00000397381 SKOR2Q2VWA4 1001 aaPredicted RBP11.72□□□□□ -0.53
UCA1-201ENST00000397381 MROH2AA6NES4 1674 aa11.72□□□□□ -0.53
UCA1-201ENST00000397381 EFCAB6Q5THR3 1501 aa11.72□□□□□ -0.53
UCA1-201ENST00000397381 PUS7Q96PZ0 661 aaKnown RBP11.72□□□□□ -0.53
UCA1-201ENST00000397381 MROH1Q8NDA8 1641 aa11.71□□□□□ -0.53
UCA1-201ENST00000397381 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.53
UCA1-201ENST00000397381 FANCAO15360 1455 aa11.71□□□□□ -0.54
UCA1-201ENST00000397381 ESPNB1AK53 854 aa11.71□□□□□ -0.54
UCA1-201ENST00000397381 GBP4Q96PP9 640 aa11.71□□□□□ -0.54
UCA1-201ENST00000397381 ADGRB3O60242 1522 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 TNNT2P45379 298 aaPredicted RBP11.7□□□□□ -0.54
UCA1-201ENST00000397381 POTEDQ86YR6 584 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 AFAP1Q8N556 730 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 SMC4Q9NTJ3 1288 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 ABCC11Q96J66 1382 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 IL16Q14005 1332 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 SLC12A5Q9H2X9 1139 aa11.7□□□□□ -0.54
UCA1-201ENST00000397381 TRIM27P14373 513 aa11.69□□□□□ -0.54
UCA1-201ENST00000397381 ATF7IPQ6VMQ6 1270 aa11.69□□□□□ -0.54
UCA1-201ENST00000397381 LMTK2Q8IWU2 1503 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms