RNA–Protein interactions for RNA: ENST00000397033.6

ITGA4-203, Transcript of integrin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGA4, Length 4,189 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-203ENST00000397033 LNPKQ9C0E8 428 aa15.31■□□□□ 0.04
ITGA4-203ENST00000397033 DZIP1LQ8IYY4 767 aaKnown RBP15.31■□□□□ 0.04
ITGA4-203ENST00000397033 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
ITGA4-203ENST00000397033 SPINK5Q9NQ38 1064 aaPredicted RBP15.3■□□□□ 0.04
ITGA4-203ENST00000397033 DCTN1Q14203 1278 aa15.3■□□□□ 0.04
ITGA4-203ENST00000397033 STAC3Q96MF2 364 aa15.3■□□□□ 0.04
ITGA4-203ENST00000397033 ITSN2Q9NZM3 1697 aa15.29■□□□□ 0.04
ITGA4-203ENST00000397033 SLFN5Q08AF3 891 aa15.29■□□□□ 0.04
ITGA4-203ENST00000397033 CHD1O14646 1710 aa15.29■□□□□ 0.04
ITGA4-203ENST00000397033 DNMT1P26358 1616 aaKnown RBP15.29■□□□□ 0.04
ITGA4-203ENST00000397033 HSP90AB1P08238 724 aaKnown RBP15.28■□□□□ 0.04
ITGA4-203ENST00000397033 DUSP27Q5VZP5 1158 aa15.28■□□□□ 0.04
ITGA4-203ENST00000397033 TNNQ9UQP3 1299 aa15.28■□□□□ 0.04
ITGA4-203ENST00000397033 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
ITGA4-203ENST00000397033 HSCBQ8IWL3 235 aa15.28■□□□□ 0.04
ITGA4-203ENST00000397033 NCKAP5LQ9HCH0 1330 aa15.28■□□□□ 0.04
ITGA4-203ENST00000397033 SLC52A1Q9NWF4 448 aa15.27■□□□□ 0.03
ITGA4-203ENST00000397033 CFAP65Q6ZU64 1925 aaKnown RBP15.27■□□□□ 0.03
ITGA4-203ENST00000397033 NOL8Q76FK4 1167 aaKnown RBP15.27■□□□□ 0.03
ITGA4-203ENST00000397033 ZNF330Q9Y3S2 320 aaPredicted RBP15.27■□□□□ 0.03
ITGA4-203ENST00000397033 NME9Q86XW9 330 aa15.26■□□□□ 0.03
ITGA4-203ENST00000397033 DMRT2Q9Y5R5 561 aa15.26■□□□□ 0.03
ITGA4-203ENST00000397033 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
ITGA4-203ENST00000397033 DENND4BO75064 1496 aaPredicted RBP15.26■□□□□ 0.03
ITGA4-203ENST00000397033 RALGAPBQ86X10 1494 aa15.26■□□□□ 0.03
ITGA4-203ENST00000397033 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
ITGA4-203ENST00000397033 MIS18AQ9NYP9 233 aa15.25■□□□□ 0.03
ITGA4-203ENST00000397033 EIF2S2P20042 333 aaKnown RBP15.25■□□□□ 0.03
ITGA4-203ENST00000397033 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
ITGA4-203ENST00000397033 ERCC6L2Q5T890 1561 aa15.25■□□□□ 0.03
ITGA4-203ENST00000397033 ABCA8O94911 1581 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 NLRP6P59044 892 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 XPCQ01831 940 aaPredicted RBP15.24■□□□□ 0.03
ITGA4-203ENST00000397033 SULT6B1Q6IMI4 303 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 UBE2Q2Q8WVN8 375 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 NOB1Q9ULX3 412 aaKnown RBP15.24■□□□□ 0.03
ITGA4-203ENST00000397033 A2MP01023 1474 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 CSB-PGBD3P0DP91 1061 aa15.24■□□□□ 0.03
ITGA4-203ENST00000397033 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
ITGA4-203ENST00000397033 C14orf93Q9H972 538 aaKnown RBP15.23■□□□□ 0.03
ITGA4-203ENST00000397033 GOLGA6L22H0YM25 854 aa15.23■□□□□ 0.03
ITGA4-203ENST00000397033 KDM5BQ9UGL1 1544 aa15.23■□□□□ 0.03
ITGA4-203ENST00000397033 NGEFQ8N5V2 710 aa15.22■□□□□ 0.03
ITGA4-203ENST00000397033 MBD5Q9P267 1494 aa15.22■□□□□ 0.03
ITGA4-203ENST00000397033 FOXD4L5Q5VV16 416 aaPredicted RBP15.21■□□□□ 0.03
ITGA4-203ENST00000397033 FOXD4L4Q8WXT5 416 aaPredicted RBP15.21■□□□□ 0.03
ITGA4-203ENST00000397033 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
ITGA4-203ENST00000397033 PLEKHH1Q9ULM0 1364 aa15.21■□□□□ 0.03
ITGA4-203ENST00000397033 PKNOX2Q96KN3 472 aa15.21■□□□□ 0.03
ITGA4-203ENST00000397033 STK31Q9BXU1 1019 aa15.21■□□□□ 0.02
ITGA4-203ENST00000397033 SCAF11Q99590 1463 aaKnown RBP15.2■□□□□ 0.02
ITGA4-203ENST00000397033 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
ITGA4-203ENST00000397033 CALD1Q05682 793 aaKnown RBP15.2■□□□□ 0.02
ITGA4-203ENST00000397033 CCDC9Q9Y3X0 531 aaKnown RBP15.2■□□□□ 0.02
ITGA4-203ENST00000397033 PARD3Q8TEW0 1356 aa15.19■□□□□ 0.02
ITGA4-203ENST00000397033 NUDT16Q96DE0 195 aaKnown RBP15.19■□□□□ 0.02
ITGA4-203ENST00000397033 ABCC10Q5T3U5 1492 aa15.18■□□□□ 0.02
ITGA4-203ENST00000397033 FAM83GA6ND36 823 aa15.18■□□□□ 0.02
ITGA4-203ENST00000397033 TRIM6-TRIM34B2RNG4 842 aa15.18■□□□□ 0.02
ITGA4-203ENST00000397033 MSNP26038 577 aaKnown RBP15.18■□□□□ 0.02
ITGA4-203ENST00000397033 IGHDP01880 384 aa15.17■□□□□ 0.02
ITGA4-203ENST00000397033 FOXD4L6Q3SYB3 417 aaPredicted RBP15.17■□□□□ 0.02
ITGA4-203ENST00000397033 FOXD4L3Q6VB84 417 aaPredicted RBP15.17■□□□□ 0.02
ITGA4-203ENST00000397033 SSH1Q8WYL5 1049 aa15.17■□□□□ 0.02
ITGA4-203ENST00000397033 RARSP54136 660 aaKnown RBP15.17■□□□□ 0.02
ITGA4-203ENST00000397033 DNTTIP2Q5QJE6 756 aaKnown RBP15.17■□□□□ 0.02
ITGA4-203ENST00000397033 MCM10Q7L590 875 aa15.17■□□□□ 0.02
ITGA4-203ENST00000397033 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
ITGA4-203ENST00000397033 PSME1Q06323 249 aa15.16■□□□□ 0.02
ITGA4-203ENST00000397033 ABTB2Q8N961 1025 aa15.16■□□□□ 0.02
ITGA4-203ENST00000397033 RNF123Q5XPI4 1314 aa15.16■□□□□ 0.02
ITGA4-203ENST00000397033 RTEL1-TNFRSF6BF6WH68 1400 aa15.16■□□□□ 0.02
ITGA4-203ENST00000397033 PTMAP06454 111 aaKnown RBP15.15■□□□□ 0.02
ITGA4-203ENST00000397033 TSPYL4Q9UJ04 414 aa15.15■□□□□ 0.02
ITGA4-203ENST00000397033 ADGRL2O95490 1459 aa15.15■□□□□ 0.02
ITGA4-203ENST00000397033 FYB1O15117 783 aa15.15■□□□□ 0.02
ITGA4-203ENST00000397033 CASC1Q6TDU7 716 aa15.15■□□□□ 0.02
ITGA4-203ENST00000397033 DUOX2Q9NRD8 1548 aa15.15■□□□□ 0.02
ITGA4-203ENST00000397033 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
ITGA4-203ENST00000397033 TWISTNBQ3B726 338 aaPredicted RBP15.14■□□□□ 0.01
ITGA4-203ENST00000397033 TMEM57Q8N5G2 664 aa15.14■□□□□ 0.01
ITGA4-203ENST00000397033 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.14■□□□□ 0.01
ITGA4-203ENST00000397033 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.14■□□□□ 0.01
ITGA4-203ENST00000397033 SHANK2Q9UPX8 1470 aa15.14■□□□□ 0.01
ITGA4-203ENST00000397033 LMOD3Q0VAK6 560 aa15.14■□□□□ 0.01
ITGA4-203ENST00000397033 CCDC61Q9Y6R9 512 aa15.14■□□□□ 0.01
ITGA4-203ENST00000397033 TRAK2O60296 914 aa15.13■□□□□ 0.01
ITGA4-203ENST00000397033 RPGRIP1LQ68CZ1 1315 aa15.13■□□□□ 0.01
ITGA4-203ENST00000397033 KCNJ4P48050 445 aa15.13■□□□□ 0.01
ITGA4-203ENST00000397033 ESCO1Q5FWF5 840 aa15.13■□□□□ 0.01
ITGA4-203ENST00000397033 RILPL2Q969X0 211 aa15.13■□□□□ 0.01
ITGA4-203ENST00000397033 CHMP4BQ9H444 224 aaKnown RBP15.13■□□□□ 0.01
ITGA4-203ENST00000397033 GBP4Q96PP9 640 aa15.12■□□□□ 0.01
ITGA4-203ENST00000397033 USHBP1Q8N6Y0 703 aa15.12■□□□□ 0.01
ITGA4-203ENST00000397033 GNAI1P63096 354 aa15.12■□□□□ 0.01
ITGA4-203ENST00000397033 PDE3AQ14432 1141 aa15.12■□□□□ 0.01
ITGA4-203ENST00000397033 ZNF518AQ6AHZ1 1483 aa15.12■□□□□ 0.01
ITGA4-203ENST00000397033 RLBP1P12271 317 aa15.11■□□□□ 0.01
ITGA4-203ENST00000397033 C8orf34Q49A92 452 aa15.11■□□□□ 0.01
ITGA4-203ENST00000397033 ATF7IPQ6VMQ6 1270 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms