RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 ADGRF5Q8IZF2 1346 aa24.29■■□□□ 1.48
CLTA-203ENST00000396603 PIK3C2GO75747 1445 aa24.28■■□□□ 1.48
CLTA-203ENST00000396603 FOXD1Q16676 465 aa24.28■■□□□ 1.48
CLTA-203ENST00000396603 NPHP3Q7Z494 1330 aa24.28■■□□□ 1.48
CLTA-203ENST00000396603 UPF1Q92900 1129 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLTA-203ENST00000396603 C8orf37Q96NL8 207 aa24.27■■□□□ 1.48
CLTA-203ENST00000396603 COL22A1Q8NFW1 1626 aaPredicted RBP24.27■■□□□ 1.48
CLTA-203ENST00000396603 KNDC1Q76NI1 1749 aa24.27■■□□□ 1.48
CLTA-203ENST00000396603 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
CLTA-203ENST00000396603 RGL3Q3MIN7 710 aa24.23■■□□□ 1.47
CLTA-203ENST00000396603 SIRT1Q96EB6 747 aa24.23■■□□□ 1.47
CLTA-203ENST00000396603 QTRT2Q9H974 415 aaKnown RBP24.23■■□□□ 1.47
CLTA-203ENST00000396603 NGLY1Q96IV0 654 aa24.21■■□□□ 1.47
CLTA-203ENST00000396603 PXDNQ92626 1479 aa24.2■■□□□ 1.47
CLTA-203ENST00000396603 NRXN1Q9ULB1 1477 aa24.2■■□□□ 1.47
CLTA-203ENST00000396603 ESCO1Q5FWF5 840 aa24.2■■□□□ 1.46
CLTA-203ENST00000396603 MYOM2P54296 1465 aa24.19■■□□□ 1.46
CLTA-203ENST00000396603 YTHDC2Q9H6S0 1430 aaKnown RBP24.19■■□□□ 1.46
CLTA-203ENST00000396603 FNBP4Q8N3X1 1017 aaPredicted RBP24.19■■□□□ 1.46
CLTA-203ENST00000396603 RGS12O14924 1447 aa24.18■■□□□ 1.46
CLTA-203ENST00000396603 ADAMTS2O95450 1211 aa24.17■■□□□ 1.46
CLTA-203ENST00000396603 C14orf93Q9H972 538 aaKnown RBP24.16■■□□□ 1.46
CLTA-203ENST00000396603 TRPC5Q9UL62 973 aaPredicted RBP24.16■■□□□ 1.46
CLTA-203ENST00000396603 WAPLQ7Z5K2 1190 aa24.15■■□□□ 1.46
CLTA-203ENST00000396603 STK26Q9P289 416 aa24.15■■□□□ 1.46
CLTA-203ENST00000396603 KIF1AQ12756 1690 aa24.15■■□□□ 1.46
CLTA-203ENST00000396603 FMN2Q9NZ56 1722 aa24.14■■□□□ 1.45
CLTA-203ENST00000396603 USP21Q9UK80 565 aa24.14■■□□□ 1.45
CLTA-203ENST00000396603 TMEM132EQ6IEE7 984 aa24.13■■□□□ 1.45
CLTA-203ENST00000396603 FOXO3O43524 673 aa24.12■■□□□ 1.45
CLTA-203ENST00000396603 DHX57Q6P158 1386 aaKnown RBP24.12■■□□□ 1.45
CLTA-203ENST00000396603 PLEKHH1Q9ULM0 1364 aa24.12■■□□□ 1.45
CLTA-203ENST00000396603 ATRNO75882 1429 aa24.11■■□□□ 1.45
CLTA-203ENST00000396603 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
CLTA-203ENST00000396603 ATAD2Q6PL18 1390 aa24.08■■□□□ 1.45
CLTA-203ENST00000396603 MARF1Q9Y4F3 1742 aaKnown RBP24.07■■□□□ 1.44
CLTA-203ENST00000396603 RAB3GAP2Q9H2M9 1393 aa24.07■■□□□ 1.44
CLTA-203ENST00000396603 SPATA31A3Q5VYP0 1347 aa24.07■■□□□ 1.44
CLTA-203ENST00000396603 STAC3Q96MF2 364 aa24.06■■□□□ 1.44
CLTA-203ENST00000396603 BCL9LQ86UU0 1499 aa24.06■■□□□ 1.44
CLTA-203ENST00000396603 CFAP70Q5T0N1 1121 aa24.04■■□□□ 1.44
CLTA-203ENST00000396603 NUTM2FA1L443 756 aa24.03■■□□□ 1.44
CLTA-203ENST00000396603 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.03■■□□□ 1.44
CLTA-203ENST00000396603 ANKARQ7Z5J8 1434 aa24.02■■□□□ 1.44
CLTA-203ENST00000396603 HRCP23327 699 aa24.02■■□□□ 1.44
CLTA-203ENST00000396603 XPCQ01831 940 aaPredicted RBP24.02■■□□□ 1.44
CLTA-203ENST00000396603 PSME1Q06323 249 aa24.02■■□□□ 1.44
CLTA-203ENST00000396603 ADGRB2O60241 1585 aa24.02■■□□□ 1.44
CLTA-203ENST00000396603 PHF8Q9UPP1 1060 aa24.01■■□□□ 1.43
CLTA-203ENST00000396603 SBNO1A3KN83 1393 aa24.01■■□□□ 1.43
CLTA-203ENST00000396603 TNS3Q68CZ2 1445 aa24.01■■□□□ 1.43
CLTA-203ENST00000396603 SLIT2O94813 1529 aa24■■□□□ 1.43
CLTA-203ENST00000396603 ADGRB1O14514 1584 aa24■■□□□ 1.43
CLTA-203ENST00000396603 KRT28Q7Z3Y7 464 aa24■■□□□ 1.43
CLTA-203ENST00000396603 PRAM1Q96QH2 718 aa23.99■■□□□ 1.43
CLTA-203ENST00000396603 GJD4Q96KN9 370 aaPredicted RBP23.98■■□□□ 1.43
CLTA-203ENST00000396603 EIF3AQ14152 1382 aaKnown RBP23.98■■□□□ 1.43
CLTA-203ENST00000396603 USP32Q8NFA0 1604 aa23.98■■□□□ 1.43
CLTA-203ENST00000396603 ARHGEF10O15013 1369 aa23.97■■□□□ 1.43
CLTA-203ENST00000396603 CCDC125Q86Z20 511 aa23.96■■□□□ 1.43
CLTA-203ENST00000396603 UNC5CLQ8IV45 518 aa23.96■■□□□ 1.43
CLTA-203ENST00000396603 POGKQ9P215 609 aa23.95■■□□□ 1.42
CLTA-203ENST00000396603 RGPD8O14715 1765 aaPredicted RBP23.91■■□□□ 1.42
CLTA-203ENST00000396603 RALGAPBQ86X10 1494 aa23.9■■□□□ 1.42
CLTA-203ENST00000396603 NWD2Q9ULI1 1742 aa23.89■■□□□ 1.41
CLTA-203ENST00000396603 TULP4Q9NRJ4 1543 aa23.89■■□□□ 1.41
CLTA-203ENST00000396603 GLI3P10071 1580 aa23.88■■□□□ 1.41
CLTA-203ENST00000396603 HAP1P54257 671 aaPredicted RBP23.88■■□□□ 1.41
CLTA-203ENST00000396603 SAFB2Q14151 953 aaKnown RBP eCLIP23.88■■□□□ 1.41
CLTA-203ENST00000396603 EP400Q96L91 3159 aa23.88■■□□□ 1.41
CLTA-203ENST00000396603 DCAF11Q8TEB1 546 aa23.87■■□□□ 1.41
CLTA-203ENST00000396603 VPS72Q15906 364 aa23.86■■□□□ 1.41
CLTA-203ENST00000396603 TRAK1Q9UPV9 953 aa23.86■■□□□ 1.41
CLTA-203ENST00000396603 ABCA3Q99758 1704 aa23.86■■□□□ 1.41
CLTA-203ENST00000396603 GPRASP1Q5JY77 1395 aa23.85■■□□□ 1.41
CLTA-203ENST00000396603 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
CLTA-203ENST00000396603 ONECUT3O60422 494 aaPredicted RBP23.83■■□□□ 1.41
CLTA-203ENST00000396603 TRPM3Q9HCF6 1732 aaPredicted RBP23.83■■□□□ 1.41
CLTA-203ENST00000396603 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CLTA-203ENST00000396603 PMFBP1Q8TBY8 1022 aa23.82■■□□□ 1.4
CLTA-203ENST00000396603 KDM2AQ9Y2K7 1162 aa23.81■■□□□ 1.4
CLTA-203ENST00000396603 BLMP54132 1417 aaPredicted RBP23.81■■□□□ 1.4
CLTA-203ENST00000396603 ALS2Q96Q42 1657 aa23.8■■□□□ 1.4
CLTA-203ENST00000396603 CABLES1Q8TDN4 633 aa23.8■■□□□ 1.4
CLTA-203ENST00000396603 MINK1Q8N4C8 1332 aaPredicted RBP23.8■■□□□ 1.4
CLTA-203ENST00000396603 PRR36Q9H6K5 1346 aa23.8■■□□□ 1.4
CLTA-203ENST00000396603 LMOD2Q6P5Q4 547 aa23.79■■□□□ 1.4
CLTA-203ENST00000396603 HIRIP3Q9BW71 556 aaPredicted RBP23.78■■□□□ 1.4
CLTA-203ENST00000396603 ZRANB1Q9UGI0 708 aa23.78■■□□□ 1.4
CLTA-203ENST00000396603 ARHGEF28Q8N1W1 1705 aaKnown RBP23.77■■□□□ 1.4
CLTA-203ENST00000396603 ITSN1Q15811 1721 aa23.76■■□□□ 1.39
CLTA-203ENST00000396603 SEPT12Q8IYM1 358 aa23.76■■□□□ 1.39
CLTA-203ENST00000396603 KIAA1210Q9ULL0 1709 aa23.76■■□□□ 1.39
CLTA-203ENST00000396603 ATP7BP35670 1465 aa23.75■■□□□ 1.39
CLTA-203ENST00000396603 FAM83GA6ND36 823 aa23.75■■□□□ 1.39
CLTA-203ENST00000396603 COL14A1Q05707 1796 aaKnown RBP23.75■■□□□ 1.39
CLTA-203ENST00000396603 NRAPQ86VF7 1730 aa23.73■■□□□ 1.39
CLTA-203ENST00000396603 NGDNQ8NEJ9 315 aaKnown RBP23.73■■□□□ 1.39
CLTA-203ENST00000396603 CCDC9Q9Y3X0 531 aaKnown RBP23.71■■□□□ 1.39
CLTA-203ENST00000396603 CRYBG1Q9Y4K1 1723 aa23.7■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms