RNA–Protein interactions for RNA: ENST00000396354.5

NDE1-201, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-201ENST00000396354 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
NDE1-201ENST00000396354 PDE4AP27815 886 aa12.25□□□□□ -0.45
NDE1-201ENST00000396354 RNF123Q5XPI4 1314 aa12.25□□□□□ -0.45
NDE1-201ENST00000396354 CARD14Q9BXL6 1004 aa12.25□□□□□ -0.45
NDE1-201ENST00000396354 ZC3H13Q5T200 1668 aaKnown RBP12.25□□□□□ -0.45
NDE1-201ENST00000396354 ADAMTS8Q9UP79 889 aa12.24□□□□□ -0.45
NDE1-201ENST00000396354 MYO3AQ8NEV4 1616 aa12.24□□□□□ -0.45
NDE1-201ENST00000396354 WDR43Q15061 677 aaKnown RBP eCLIP12.24□□□□□ -0.45
NDE1-201ENST00000396354 BLMP54132 1417 aaPredicted RBP12.24□□□□□ -0.45
NDE1-201ENST00000396354 ARXQ96QS3 562 aa12.23□□□□□ -0.45
NDE1-201ENST00000396354 DAXXQ9UER7 740 aaPredicted RBP12.23□□□□□ -0.45
NDE1-201ENST00000396354 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NDE1-201ENST00000396354 NEXMIFQ5QGS0 1516 aa12.23□□□□□ -0.45
NDE1-201ENST00000396354 TRAK1Q9UPV9 953 aa12.22□□□□□ -0.45
NDE1-201ENST00000396354 ASXL1Q8IXJ9 1541 aa12.22□□□□□ -0.45
NDE1-201ENST00000396354 QRICH2Q9H0J4 1663 aa12.22□□□□□ -0.45
NDE1-201ENST00000396354 KNSTRNQ9Y448 316 aa12.22□□□□□ -0.45
NDE1-201ENST00000396354 MLECQ14165 292 aa12.21□□□□□ -0.46
NDE1-201ENST00000396354 IL27Q8NEV9 243 aa12.21□□□□□ -0.46
NDE1-201ENST00000396354 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
NDE1-201ENST00000396354 IDI1Q13907 227 aa12.2□□□□□ -0.46
NDE1-201ENST00000396354 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
NDE1-201ENST00000396354 EIF3AQ14152 1382 aaKnown RBP12.2□□□□□ -0.46
NDE1-201ENST00000396354 STAC3Q96MF2 364 aa12.2□□□□□ -0.46
NDE1-201ENST00000396354 C14orf93Q9H972 538 aaKnown RBP12.2□□□□□ -0.46
NDE1-201ENST00000396354 FBXO31Q5XUX0 539 aaPredicted RBP12.19□□□□□ -0.46
NDE1-201ENST00000396354 RRP7AQ9Y3A4 280 aaKnown RBP12.19□□□□□ -0.46
NDE1-201ENST00000396354 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
NDE1-201ENST00000396354 PREX1Q8TCU6 1659 aa12.18□□□□□ -0.46
NDE1-201ENST00000396354 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
NDE1-201ENST00000396354 ARHGEF28Q8N1W1 1705 aaKnown RBP12.18□□□□□ -0.46
NDE1-201ENST00000396354 FRAT1Q92837 279 aaPredicted RBP12.17□□□□□ -0.46
NDE1-201ENST00000396354 CENPJQ9HC77 1338 aaPredicted RBP12.17□□□□□ -0.46
NDE1-201ENST00000396354 BCL2L13Q9BXK5 485 aa12.17□□□□□ -0.46
NDE1-201ENST00000396354 TULP4Q9NRJ4 1543 aa12.17□□□□□ -0.46
NDE1-201ENST00000396354 TMEM131LA2VDJ0 1609 aa12.16□□□□□ -0.46
NDE1-201ENST00000396354 SAFB2Q14151 953 aaKnown RBP eCLIP12.16□□□□□ -0.46
NDE1-201ENST00000396354 SLC12A5Q9H2X9 1139 aa12.16□□□□□ -0.46
NDE1-201ENST00000396354 APAF1O14727 1248 aa12.16□□□□□ -0.46
NDE1-201ENST00000396354 ARHGAP31Q2M1Z3 1444 aa12.15□□□□□ -0.46
NDE1-201ENST00000396354 SBNO2Q9Y2G9 1366 aa12.15□□□□□ -0.46
NDE1-201ENST00000396354 BCAR3O75815 825 aa12.14□□□□□ -0.47
NDE1-201ENST00000396354 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.14□□□□□ -0.47
NDE1-201ENST00000396354 CDCA8Q53HL2 280 aa12.13□□□□□ -0.47
NDE1-201ENST00000396354 NSD3Q9BZ95 1437 aa12.13□□□□□ -0.47
NDE1-201ENST00000396354 BACH2Q9BYV9 841 aa12.13□□□□□ -0.47
NDE1-201ENST00000396354 TCERG1O14776 1098 aaKnown RBP12.13□□□□□ -0.47
NDE1-201ENST00000396354 CLUAP1Q96AJ1 413 aa12.13□□□□□ -0.47
NDE1-201ENST00000396354 NPC1L1Q9UHC9 1359 aa12.12□□□□□ -0.47
NDE1-201ENST00000396354 SPRYD3Q8NCJ5 442 aa12.12□□□□□ -0.47
NDE1-201ENST00000396354 SPINK5Q9NQ38 1064 aaPredicted RBP12.12□□□□□ -0.47
NDE1-201ENST00000396354 REREQ9P2R6 1566 aa12.12□□□□□ -0.47
NDE1-201ENST00000396354 ZNF521Q96K83 1311 aa12.11□□□□□ -0.47
NDE1-201ENST00000396354 CLTCQ00610 1675 aaKnown RBP12.11□□□□□ -0.47
NDE1-201ENST00000396354 SHPRHQ149N8 1683 aa12.11□□□□□ -0.47
NDE1-201ENST00000396354 AGLP35573 1532 aa12.11□□□□□ -0.47
NDE1-201ENST00000396354 STK26Q9P289 416 aa12.11□□□□□ -0.47
NDE1-201ENST00000396354 RPGRIP1LQ68CZ1 1315 aa12.1□□□□□ -0.47
NDE1-201ENST00000396354 INSRP06213 1382 aa12.1□□□□□ -0.47
NDE1-201ENST00000396354 CABP2Q9NPB3 220 aa12.1□□□□□ -0.47
NDE1-201ENST00000396354 PTPRMP28827 1452 aa12.09□□□□□ -0.47
NDE1-201ENST00000396354 GOLGA2Q08379 1002 aa12.09□□□□□ -0.47
NDE1-201ENST00000396354 PANK1Q8TE04 598 aa12.08□□□□□ -0.48
NDE1-201ENST00000396354 COG6Q9Y2V7 657 aa12.08□□□□□ -0.48
NDE1-201ENST00000396354 SLKQ9H2G2 1235 aaPredicted RBP12.08□□□□□ -0.48
NDE1-201ENST00000396354 DUSP27Q5VZP5 1158 aa12.07□□□□□ -0.48
NDE1-201ENST00000396354 ANO8Q9HCE9 1232 aaPredicted RBP12.07□□□□□ -0.48
NDE1-201ENST00000396354 BRPF3Q9ULD4 1205 aa12.07□□□□□ -0.48
NDE1-201ENST00000396354 VGFO15240 615 aaPredicted RBP12.07□□□□□ -0.48
NDE1-201ENST00000396354 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
NDE1-201ENST00000396354 ESF1Q9H501 851 aaKnown RBP12.06□□□□□ -0.48
NDE1-201ENST00000396354 ATF5Q9Y2D1 282 aaPredicted RBP12.06□□□□□ -0.48
NDE1-201ENST00000396354 ZFYVE9O95405 1425 aa12.06□□□□□ -0.48
NDE1-201ENST00000396354 SLC52A1Q9NWF4 448 aa12.05□□□□□ -0.48
NDE1-201ENST00000396354 ALKQ9UM73 1620 aa12.05□□□□□ -0.48
NDE1-201ENST00000396354 TNNQ9UQP3 1299 aa12.05□□□□□ -0.48
NDE1-201ENST00000396354 SETD1AO15047 1707 aaKnown RBP12.05□□□□□ -0.48
NDE1-201ENST00000396354 CD163L1Q9NR16 1453 aa12.04□□□□□ -0.48
NDE1-201ENST00000396354 USP32Q8NFA0 1604 aa12.04□□□□□ -0.48
NDE1-201ENST00000396354 MINK1Q8N4C8 1332 aaPredicted RBP12.04□□□□□ -0.48
NDE1-201ENST00000396354 A0A1W2PP64 1363 aa12.04□□□□□ -0.48
NDE1-201ENST00000396354 SAMD1Q6SPF0 538 aaPredicted RBP12.03□□□□□ -0.48
NDE1-201ENST00000396354 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
NDE1-201ENST00000396354 YTHDC2Q9H6S0 1430 aaKnown RBP12.03□□□□□ -0.48
NDE1-201ENST00000396354 A2ML1A8K2U0 1454 aa12.03□□□□□ -0.48
NDE1-201ENST00000396354 SPATA31D1Q6ZQQ2 1576 aa12.02□□□□□ -0.48
NDE1-201ENST00000396354 CEBPAP49715 358 aaPredicted RBP12.02□□□□□ -0.48
NDE1-201ENST00000396354 NRXN3Q9Y4C0 1643 aa12.02□□□□□ -0.49
NDE1-201ENST00000396354 FRAT2O75474 233 aaPredicted RBP12.02□□□□□ -0.49
NDE1-201ENST00000396354 NFKBIBQ15653 356 aa12.02□□□□□ -0.49
NDE1-201ENST00000396354 EIF5BO60841 1220 aaKnown RBP12.01□□□□□ -0.49
NDE1-201ENST00000396354 MORC1Q86VD1 984 aa12.01□□□□□ -0.49
NDE1-201ENST00000396354 POLR3AO14802 1390 aaPredicted RBP12.01□□□□□ -0.49
NDE1-201ENST00000396354 SLFN5Q08AF3 891 aa12.01□□□□□ -0.49
NDE1-201ENST00000396354 EVC2Q86UK5 1308 aa12.01□□□□□ -0.49
NDE1-201ENST00000396354 ANKRD36BQ8N2N9 1353 aa12.01□□□□□ -0.49
NDE1-201ENST00000396354 TRMT2AQ8IZ69 625 aaKnown RBP12.01□□□□□ -0.49
NDE1-201ENST00000396354 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
NDE1-201ENST00000396354 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
NDE1-201ENST00000396354 IGHDP01880 384 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms