RNA–Protein interactions for RNA: ENST00000396307.6

RAB27A-202, Transcript of RAB27A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB27A, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27A-202ENST00000396307 SALL2Q9Y467 1007 aaPredicted RBP11.4□□□□□ -0.58
RAB27A-202ENST00000396307 ZNF326Q5BKZ1 582 aaKnown RBP11.39□□□□□ -0.59
RAB27A-202ENST00000396307 RRP7BPQ9NSQ0 103 aa11.39□□□□□ -0.59
RAB27A-202ENST00000396307 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
RAB27A-202ENST00000396307 N4BP2Q86UW6 1770 aaPredicted RBP11.39□□□□□ -0.59
RAB27A-202ENST00000396307 PPP4R2Q9NY27 417 aa11.39□□□□□ -0.59
RAB27A-202ENST00000396307 FOXD1Q16676 465 aa11.38□□□□□ -0.59
RAB27A-202ENST00000396307 SBNO2Q9Y2G9 1366 aa11.38□□□□□ -0.59
RAB27A-202ENST00000396307 LTBP4Q8N2S1 1624 aa11.37□□□□□ -0.59
RAB27A-202ENST00000396307 PEAK1Q9H792 1746 aa11.37□□□□□ -0.59
RAB27A-202ENST00000396307 FANCIQ9NVI1 1328 aa11.37□□□□□ -0.59
RAB27A-202ENST00000396307 NOP58Q9Y2X3 529 aaKnown RBP11.36□□□□□ -0.59
RAB27A-202ENST00000396307 HSPA5P11021 654 aaKnown RBP11.36□□□□□ -0.59
RAB27A-202ENST00000396307 VIRMAQ69YN4 1812 aaKnown RBP11.35□□□□□ -0.59
RAB27A-202ENST00000396307 PIK3C2AO00443 1686 aa11.33□□□□□ -0.6
RAB27A-202ENST00000396307 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.33□□□□□ -0.6
RAB27A-202ENST00000396307 COL18A1P39060 1754 aa11.33□□□□□ -0.6
RAB27A-202ENST00000396307 ANP32AP39687 249 aaKnown RBP11.33□□□□□ -0.6
RAB27A-202ENST00000396307 LAS1LQ9Y4W2 734 aaKnown RBP11.33□□□□□ -0.6
RAB27A-202ENST00000396307 PTCH1Q13635 1447 aa11.33□□□□□ -0.6
RAB27A-202ENST00000396307 FAM208AQ9UK61 1670 aaKnown RBP11.33□□□□□ -0.6
RAB27A-202ENST00000396307 SPAG9O60271 1321 aaKnown RBP11.32□□□□□ -0.6
RAB27A-202ENST00000396307 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.31□□□□□ -0.6
RAB27A-202ENST00000396307 ZBTB47Q9UFB7 747 aaPredicted RBP11.31□□□□□ -0.6
RAB27A-202ENST00000396307 CFDP1Q9UEE9 299 aaPredicted RBP11.31□□□□□ -0.6
RAB27A-202ENST00000396307 WASHC2AQ641Q2 1341 aa11.3□□□□□ -0.6
RAB27A-202ENST00000396307 ZNF644Q9H582 1327 aaPredicted RBP11.3□□□□□ -0.6
RAB27A-202ENST00000396307 EIF4G2P78344 907 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAB27A-202ENST00000396307 NCOA3Q9Y6Q9 1424 aa11.3□□□□□ -0.6
RAB27A-202ENST00000396307 SHANK3Q9BYB0 1731 aa11.3□□□□□ -0.6
RAB27A-202ENST00000396307 ZNF831Q5JPB2 1677 aa11.29□□□□□ -0.6
RAB27A-202ENST00000396307 TULP4Q9NRJ4 1543 aa11.29□□□□□ -0.6
RAB27A-202ENST00000396307 SIPA1L3O60292 1781 aaPredicted RBP11.29□□□□□ -0.6
RAB27A-202ENST00000396307 PARP4Q9UKK3 1724 aaKnown RBP11.28□□□□□ -0.6
RAB27A-202ENST00000396307 IL27Q8NEV9 243 aa11.28□□□□□ -0.6
RAB27A-202ENST00000396307 COL24A1Q17RW2 1714 aa11.28□□□□□ -0.6
RAB27A-202ENST00000396307 RGPD8O14715 1765 aaPredicted RBP11.27□□□□□ -0.6
RAB27A-202ENST00000396307 ADAMTS13Q76LX8 1427 aa11.27□□□□□ -0.61
RAB27A-202ENST00000396307 NKTRP30414 1462 aaKnown RBP11.27□□□□□ -0.61
RAB27A-202ENST00000396307 SCAF11Q99590 1463 aaKnown RBP11.27□□□□□ -0.61
RAB27A-202ENST00000396307 LRRC37A3O60309 1634 aa11.26□□□□□ -0.61
RAB27A-202ENST00000396307 NRAPQ86VF7 1730 aa11.26□□□□□ -0.61
RAB27A-202ENST00000396307 C11orf95C9JLR9 678 aaPredicted RBP11.26□□□□□ -0.61
RAB27A-202ENST00000396307 TAF7LQ5H9L4 462 aa11.26□□□□□ -0.61
RAB27A-202ENST00000396307 RAPGEF3O95398 923 aa11.25□□□□□ -0.61
RAB27A-202ENST00000396307 FGD1P98174 961 aa11.25□□□□□ -0.61
RAB27A-202ENST00000396307 STAC3Q96MF2 364 aa11.25□□□□□ -0.61
RAB27A-202ENST00000396307 PRKRIP1Q9H875 184 aaPredicted RBP11.24□□□□□ -0.61
RAB27A-202ENST00000396307 ZMYM3Q14202 1370 aa11.23□□□□□ -0.61
RAB27A-202ENST00000396307 NUP155O75694 1391 aa11.23□□□□□ -0.61
RAB27A-202ENST00000396307 FAM135BQ49AJ0 1406 aa11.23□□□□□ -0.61
RAB27A-202ENST00000396307 L3MBTL2Q969R5 705 aa11.23□□□□□ -0.61
RAB27A-202ENST00000396307 CD163L1Q9NR16 1453 aa11.22□□□□□ -0.61
RAB27A-202ENST00000396307 PKD2Q13563 968 aa11.22□□□□□ -0.61
RAB27A-202ENST00000396307 PAXIP1Q6ZW49 1069 aaPredicted RBP11.22□□□□□ -0.61
RAB27A-202ENST00000396307 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
RAB27A-202ENST00000396307 PAPPAQ13219 1627 aa11.22□□□□□ -0.61
RAB27A-202ENST00000396307 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
RAB27A-202ENST00000396307 NEFMP07197 916 aa11.21□□□□□ -0.61
RAB27A-202ENST00000396307 SMG6Q86US8 1419 aaKnown RBP11.21□□□□□ -0.61
RAB27A-202ENST00000396307 PIK3R4Q99570 1358 aa11.21□□□□□ -0.61
RAB27A-202ENST00000396307 MYT1LQ9UL68 1186 aa11.2□□□□□ -0.62
RAB27A-202ENST00000396307 SKAP1Q86WV1 359 aa11.19□□□□□ -0.62
RAB27A-202ENST00000396307 IPO9Q96P70 1041 aaKnown RBP11.19□□□□□ -0.62
RAB27A-202ENST00000396307 INSRP06213 1382 aa11.19□□□□□ -0.62
RAB27A-202ENST00000396307 SAMD1Q6SPF0 538 aaPredicted RBP11.19□□□□□ -0.62
RAB27A-202ENST00000396307 TMC1Q8TDI8 760 aa11.19□□□□□ -0.62
RAB27A-202ENST00000396307 AFAP1Q8N556 730 aa11.18□□□□□ -0.62
RAB27A-202ENST00000396307 PKD1L3Q7Z443 1732 aa11.18□□□□□ -0.62
RAB27A-202ENST00000396307 SLIT3O75094 1523 aa11.18□□□□□ -0.62
RAB27A-202ENST00000396307 NCAPD2Q15021 1401 aa11.17□□□□□ -0.62
RAB27A-202ENST00000396307 SSH2Q76I76 1423 aa11.17□□□□□ -0.62
RAB27A-202ENST00000396307 RGPD3A6NKT7 1758 aaPredicted RBP11.17□□□□□ -0.62
RAB27A-202ENST00000396307 RGPD4Q7Z3J3 1758 aa11.17□□□□□ -0.62
RAB27A-202ENST00000396307 RREB1Q92766 1687 aa11.17□□□□□ -0.62
RAB27A-202ENST00000396307 KANK1Q14678 1352 aa11.17□□□□□ -0.62
RAB27A-202ENST00000396307 TNRQ92752 1358 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 PLEKHG1Q9ULL1 1385 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 DCCP43146 1447 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 SLC4A3P48751 1232 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 TSPY4P0CV99 314 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 TSPY10P0CW01 314 aa11.16□□□□□ -0.62
RAB27A-202ENST00000396307 ZBED9Q6R2W3 1325 aa11.15□□□□□ -0.62
RAB27A-202ENST00000396307 SIRT1Q96EB6 747 aa11.15□□□□□ -0.63
RAB27A-202ENST00000396307 PHLPP1O60346 1717 aa11.15□□□□□ -0.63
RAB27A-202ENST00000396307 CDK12Q9NYV4 1490 aaPredicted RBP11.14□□□□□ -0.63
RAB27A-202ENST00000396307 NWD2Q9ULI1 1742 aa11.14□□□□□ -0.63
RAB27A-202ENST00000396307 BRD2P25440 801 aaKnown RBP11.14□□□□□ -0.63
RAB27A-202ENST00000396307 KDM2AQ9Y2K7 1162 aa11.14□□□□□ -0.63
RAB27A-202ENST00000396307 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
RAB27A-202ENST00000396307 MPHOSPH9Q99550 1183 aa11.13□□□□□ -0.63
RAB27A-202ENST00000396307 NBPF8Q3BBV2 869 aa11.13□□□□□ -0.63
RAB27A-202ENST00000396307 ERICH6BQ5W0A0 696 aa11.13□□□□□ -0.63
RAB27A-202ENST00000396307 EXOC6Q8TAG9 804 aa11.12□□□□□ -0.63
RAB27A-202ENST00000396307 GLI3P10071 1580 aa11.12□□□□□ -0.63
RAB27A-202ENST00000396307 RPGRIP1LQ68CZ1 1315 aa11.12□□□□□ -0.63
RAB27A-202ENST00000396307 COL16A1Q07092 1604 aaPredicted RBP11.12□□□□□ -0.63
RAB27A-202ENST00000396307 PLIN1O60240 522 aa11.11□□□□□ -0.63
RAB27A-202ENST00000396307 HNRNPMP52272 730 aaKnown RBP eCLIP11.11□□□□□ -0.63
RAB27A-202ENST00000396307 PTPRUQ92729 1446 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms