RNA–Protein interactions for RNA: ENST00000395980.6

BDNF-204, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-204ENST00000395980 COG6Q9Y2V7 657 aa11.12□□□□□ -0.63
BDNF-204ENST00000395980 RARSP54136 660 aaKnown RBP11.12□□□□□ -0.63
BDNF-204ENST00000395980 CCDC27Q2M243 656 aa11.12□□□□□ -0.63
BDNF-204ENST00000395980 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
BDNF-204ENST00000395980 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
BDNF-204ENST00000395980 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.11□□□□□ -0.63
BDNF-204ENST00000395980 SEC24BO95487 1268 aa11.11□□□□□ -0.63
BDNF-204ENST00000395980 ZC3H13Q5T200 1668 aaKnown RBP11.1□□□□□ -0.63
BDNF-204ENST00000395980 ADGRL1O94910 1474 aa11.1□□□□□ -0.63
BDNF-204ENST00000395980 POGKQ9P215 609 aa11.1□□□□□ -0.63
BDNF-204ENST00000395980 ATP7AQ04656 1500 aa11.1□□□□□ -0.63
BDNF-204ENST00000395980 RWDD1Q9H446 243 aaPredicted RBP11.09□□□□□ -0.63
BDNF-204ENST00000395980 MROH1Q8NDA8 1641 aa11.09□□□□□ -0.63
BDNF-204ENST00000395980 EFCAB6Q5THR3 1501 aa11.09□□□□□ -0.63
BDNF-204ENST00000395980 CT47B1P0C2W7 299 aaPredicted RBP11.08□□□□□ -0.64
BDNF-204ENST00000395980 NSD3Q9BZ95 1437 aa11.08□□□□□ -0.64
BDNF-204ENST00000395980 CFAP70Q5T0N1 1121 aa11.08□□□□□ -0.64
BDNF-204ENST00000395980 PDZRN3Q9UPQ7 1066 aa11.08□□□□□ -0.64
BDNF-204ENST00000395980 ZNF518AQ6AHZ1 1483 aa11.08□□□□□ -0.64
BDNF-204ENST00000395980 PCDHB15Q9Y5E8 787 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 ADGRB2O60241 1585 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 TBC1D2Q9BYX2 928 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 FANCAO15360 1455 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 SLKQ9H2G2 1235 aaPredicted RBP11.07□□□□□ -0.64
BDNF-204ENST00000395980 ABCA9Q8IUA7 1624 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
BDNF-204ENST00000395980 MORC1Q86VD1 984 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 MROH2AA6NES4 1674 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 TCP11L2Q8N4U5 519 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 UBE2Q2Q8WVN8 375 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 MYH16Q9H6N6 1097 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 NSD2O96028 1365 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
BDNF-204ENST00000395980 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
BDNF-204ENST00000395980 RLBP1P12271 317 aa11.05□□□□□ -0.64
BDNF-204ENST00000395980 PUS7Q96PZ0 661 aaKnown RBP11.05□□□□□ -0.64
BDNF-204ENST00000395980 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
BDNF-204ENST00000395980 CFAP53Q96M91 514 aa11.05□□□□□ -0.64
BDNF-204ENST00000395980 MVPQ14764 893 aaKnown RBP11.05□□□□□ -0.64
BDNF-204ENST00000395980 UGGT1Q9NYU2 1555 aa11.04□□□□□ -0.64
BDNF-204ENST00000395980 AFAP1Q8N556 730 aa11.04□□□□□ -0.64
BDNF-204ENST00000395980 CHMP5Q9NZZ3 219 aa11.04□□□□□ -0.64
BDNF-204ENST00000395980 MCM4P33991 863 aa11.03□□□□□ -0.64
BDNF-204ENST00000395980 PPRC1Q5VV67 1664 aaKnown RBP11.03□□□□□ -0.64
BDNF-204ENST00000395980 ZKSCAN2Q63HK3 967 aa11.03□□□□□ -0.64
BDNF-204ENST00000395980 ISY1Q9ULR0 285 aaKnown RBP11.03□□□□□ -0.64
BDNF-204ENST00000395980 ADGRB1O14514 1584 aa11.03□□□□□ -0.64
BDNF-204ENST00000395980 PPLO60437 1756 aa11.02□□□□□ -0.64
BDNF-204ENST00000395980 GOLGA6L3A6NEY3 463 aa11.02□□□□□ -0.64
BDNF-204ENST00000395980 HDAC1Q13547 482 aaPredicted RBP11.02□□□□□ -0.64
BDNF-204ENST00000395980 NOS1P29475 1434 aa11.01□□□□□ -0.65
BDNF-204ENST00000395980 KIF3BO15066 747 aa11.01□□□□□ -0.65
BDNF-204ENST00000395980 DZIP1LQ8IYY4 767 aaKnown RBP11.01□□□□□ -0.65
BDNF-204ENST00000395980 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
BDNF-204ENST00000395980 RRP7AQ9Y3A4 280 aaKnown RBP11.01□□□□□ -0.65
BDNF-204ENST00000395980 NCOA3Q9Y6Q9 1424 aa11.01□□□□□ -0.65
BDNF-204ENST00000395980 EIF5BO60841 1220 aaKnown RBP11□□□□□ -0.65
BDNF-204ENST00000395980 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
BDNF-204ENST00000395980 TNNQ9UQP3 1299 aa11□□□□□ -0.65
BDNF-204ENST00000395980 NEUROD2Q15784 382 aa11□□□□□ -0.65
BDNF-204ENST00000395980 C14orf93Q9H972 538 aaKnown RBP11□□□□□ -0.65
BDNF-204ENST00000395980 DDX11L8A8MPP1 907 aa11□□□□□ -0.65
BDNF-204ENST00000395980 XRCC6P12956 609 aaKnown RBP eCLIP11□□□□□ -0.65
BDNF-204ENST00000395980 MTHFSP49914 203 aa11□□□□□ -0.65
BDNF-204ENST00000395980 FTSJ3Q8IY81 847 aaKnown RBP10.99□□□□□ -0.65
BDNF-204ENST00000395980 DDX19BQ9UMR2 479 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 ANKRD36BQ8N2N9 1353 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 ABCC11Q96J66 1382 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 RPGRIP1LQ68CZ1 1315 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 IL16Q14005 1332 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 SMC5Q8IY18 1101 aa10.99□□□□□ -0.65
BDNF-204ENST00000395980 MRE11P49959 708 aa10.98□□□□□ -0.65
BDNF-204ENST00000395980 SLC12A5Q9H2X9 1139 aa10.98□□□□□ -0.65
BDNF-204ENST00000395980 CLCN1P35523 988 aa10.98□□□□□ -0.65
BDNF-204ENST00000395980 BCL2L13Q9BXK5 485 aa10.98□□□□□ -0.65
BDNF-204ENST00000395980 HSCBQ8IWL3 235 aa10.97□□□□□ -0.65
BDNF-204ENST00000395980 SNX21Q969T3 373 aa10.97□□□□□ -0.65
BDNF-204ENST00000395980 TRAK2O60296 914 aa10.97□□□□□ -0.65
BDNF-204ENST00000395980 CIZ1Q9ULV3 898 aaPredicted RBP10.97□□□□□ -0.65
BDNF-204ENST00000395980 KIDINS220Q9ULH0 1771 aa10.97□□□□□ -0.65
BDNF-204ENST00000395980 ZNF692Q9BU19 519 aaPredicted RBP10.96□□□□□ -0.65
BDNF-204ENST00000395980 DDIT3P35638 169 aa10.96□□□□□ -0.65
BDNF-204ENST00000395980 RBM25P49756 843 aaKnown RBP10.96□□□□□ -0.65
BDNF-204ENST00000395980 ARHGEF28Q8N1W1 1705 aaKnown RBP10.96□□□□□ -0.66
BDNF-204ENST00000395980 GLI2P10070 1586 aa10.96□□□□□ -0.66
BDNF-204ENST00000395980 PTMSP20962 102 aa10.96□□□□□ -0.66
BDNF-204ENST00000395980 TULP4Q9NRJ4 1543 aa10.96□□□□□ -0.66
BDNF-204ENST00000395980 MFAP1P55081 439 aaKnown RBP10.95□□□□□ -0.66
BDNF-204ENST00000395980 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
BDNF-204ENST00000395980 TRIM27P14373 513 aa10.95□□□□□ -0.66
BDNF-204ENST00000395980 TNNT2P45379 298 aaPredicted RBP10.95□□□□□ -0.66
BDNF-204ENST00000395980 ATF7IPQ6VMQ6 1270 aa10.95□□□□□ -0.66
BDNF-204ENST00000395980 SMC4Q9NTJ3 1288 aa10.95□□□□□ -0.66
BDNF-204ENST00000395980 COL3A1P02461 1466 aaPredicted RBP10.95□□□□□ -0.66
BDNF-204ENST00000395980 U2AF1L5P0DN76 240 aaPredicted RBP10.95□□□□□ -0.66
BDNF-204ENST00000395980 U2AF1Q01081 240 aaKnown RBP eCLIP10.95□□□□□ -0.66
BDNF-204ENST00000395980 TRAK1Q9UPV9 953 aa10.95□□□□□ -0.66
BDNF-204ENST00000395980 KIF16BQ96L93 1317 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms