RNA–Protein interactions for RNA: ENST00000395573.8

CNIH1-202, Transcript of cornichon family AMPA receptor auxiliary protein 1, humanhuman

TSL 1 (best) BASIC

Gene CNIH1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH1-202ENST00000395573 CCDC144AA2RUR9 1427 aa16.52■□□□□ 0.23
CNIH1-202ENST00000395573 SETD5Q9C0A6 1442 aa16.5■□□□□ 0.23
CNIH1-202ENST00000395573 DSG3P32926 999 aa16.49■□□□□ 0.23
CNIH1-202ENST00000395573 PRAG1Q86YV5 1406 aa16.49■□□□□ 0.23
CNIH1-202ENST00000395573 ZNF219Q9P2Y4 722 aaPredicted RBP16.49■□□□□ 0.23
CNIH1-202ENST00000395573 ROBO2Q9HCK4 1378 aa16.49■□□□□ 0.23
CNIH1-202ENST00000395573 C1orf167Q5SNV9 1468 aa16.48■□□□□ 0.23
CNIH1-202ENST00000395573 MARF1Q9Y4F3 1742 aaKnown RBP16.48■□□□□ 0.23
CNIH1-202ENST00000395573 RGPD8O14715 1765 aaPredicted RBP16.48■□□□□ 0.23
CNIH1-202ENST00000395573 CDC42BPGQ6DT37 1551 aa16.47■□□□□ 0.23
CNIH1-202ENST00000395573 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
CNIH1-202ENST00000395573 NUTM2EB1AL46 878 aaPredicted RBP16.47■□□□□ 0.23
CNIH1-202ENST00000395573 NUTM2AQ8IVF1 878 aaPredicted RBP16.47■□□□□ 0.23
CNIH1-202ENST00000395573 SPATA31E1Q6ZUB1 1445 aa16.46■□□□□ 0.23
CNIH1-202ENST00000395573 ZNF772Q68DY9 489 aaPredicted RBP16.45■□□□□ 0.22
CNIH1-202ENST00000395573 DDX17Q92841 729 aaKnown RBP16.45■□□□□ 0.22
CNIH1-202ENST00000395573 LRRC59Q96AG4 307 aaKnown RBP16.45■□□□□ 0.22
CNIH1-202ENST00000395573 MPHOSPH9Q99550 1183 aa16.45■□□□□ 0.22
CNIH1-202ENST00000395573 RGL3Q3MIN7 710 aa16.44■□□□□ 0.22
CNIH1-202ENST00000395573 FMN2Q9NZ56 1722 aa16.44■□□□□ 0.22
CNIH1-202ENST00000395573 COL22A1Q8NFW1 1626 aaPredicted RBP16.43■□□□□ 0.22
CNIH1-202ENST00000395573 ADGRF5Q8IZF2 1346 aa16.43■□□□□ 0.22
CNIH1-202ENST00000395573 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
CNIH1-202ENST00000395573 ANKRD30BQ9BXX2 1392 aa16.42■□□□□ 0.22
CNIH1-202ENST00000395573 PIK3C2GO75747 1445 aa16.4■□□□□ 0.22
CNIH1-202ENST00000395573 ZBTB22O15209 634 aa16.4■□□□□ 0.22
CNIH1-202ENST00000395573 AFF2P51816 1311 aa16.4■□□□□ 0.22
CNIH1-202ENST00000395573 KIF1AQ12756 1690 aa16.4■□□□□ 0.22
CNIH1-202ENST00000395573 TECPR2O15040 1411 aa16.39■□□□□ 0.21
CNIH1-202ENST00000395573 ORAI2Q96SN7 254 aa16.39■□□□□ 0.21
CNIH1-202ENST00000395573 ACIN1Q9UKV3 1341 aaKnown RBP16.39■□□□□ 0.21
CNIH1-202ENST00000395573 STK26Q9P289 416 aa16.38■□□□□ 0.21
CNIH1-202ENST00000395573 C8orf37Q96NL8 207 aa16.37■□□□□ 0.21
CNIH1-202ENST00000395573 LRPPRCP42704 1394 aaKnown RBP16.37■□□□□ 0.21
CNIH1-202ENST00000395573 CDK12Q9NYV4 1490 aaPredicted RBP16.36■□□□□ 0.21
CNIH1-202ENST00000395573 RXRBP28702 533 aa16.36■□□□□ 0.21
CNIH1-202ENST00000395573 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
CNIH1-202ENST00000395573 YTHDC2Q9H6S0 1430 aaKnown RBP16.36■□□□□ 0.21
CNIH1-202ENST00000395573 MYOM2P54296 1465 aa16.35■□□□□ 0.21
CNIH1-202ENST00000395573 TMEM132EQ6IEE7 984 aa16.35■□□□□ 0.21
CNIH1-202ENST00000395573 RAB3GAP2Q9H2M9 1393 aa16.35■□□□□ 0.21
CNIH1-202ENST00000395573 PXDNQ92626 1479 aa16.35■□□□□ 0.21
CNIH1-202ENST00000395573 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
CNIH1-202ENST00000395573 WAPLQ7Z5K2 1190 aa16.34■□□□□ 0.21
CNIH1-202ENST00000395573 ABCC11Q96J66 1382 aa16.34■□□□□ 0.21
CNIH1-202ENST00000395573 NRXN1Q9ULB1 1477 aa16.34■□□□□ 0.21
CNIH1-202ENST00000395573 ABCB7O75027 752 aa16.33■□□□□ 0.2
CNIH1-202ENST00000395573 ADAMTS2O95450 1211 aa16.33■□□□□ 0.2
CNIH1-202ENST00000395573 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
CNIH1-202ENST00000395573 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
CNIH1-202ENST00000395573 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.31■□□□□ 0.2
CNIH1-202ENST00000395573 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
CNIH1-202ENST00000395573 NGLY1Q96IV0 654 aa16.31■□□□□ 0.2
CNIH1-202ENST00000395573 ABCA3Q99758 1704 aa16.31■□□□□ 0.2
CNIH1-202ENST00000395573 QTRT2Q9H974 415 aaKnown RBP16.3■□□□□ 0.2
CNIH1-202ENST00000395573 RGS12O14924 1447 aa16.29■□□□□ 0.2
CNIH1-202ENST00000395573 EP400Q96L91 3159 aa16.29■□□□□ 0.2
CNIH1-202ENST00000395573 DHX57Q6P158 1386 aaKnown RBP16.28■□□□□ 0.2
CNIH1-202ENST00000395573 USP32Q8NFA0 1604 aa16.28■□□□□ 0.2
CNIH1-202ENST00000395573 FOXO3O43524 673 aa16.28■□□□□ 0.2
CNIH1-202ENST00000395573 XPCQ01831 940 aaPredicted RBP16.28■□□□□ 0.2
CNIH1-202ENST00000395573 UPF1Q92900 1129 aaKnown RBP eCLIP16.28■□□□□ 0.26e-7■■□□□ 11.5
CNIH1-202ENST00000395573 C14orf93Q9H972 538 aaKnown RBP16.28■□□□□ 0.2
CNIH1-202ENST00000395573 RBM6P78332 1123 aaKnown RBP16.27■□□□□ 0.2
CNIH1-202ENST00000395573 CFAP70Q5T0N1 1121 aa16.27■□□□□ 0.2
CNIH1-202ENST00000395573 ADGRB2O60241 1585 aa16.26■□□□□ 0.19
CNIH1-202ENST00000395573 DLC1Q96QB1 1528 aa16.26■□□□□ 0.19
CNIH1-202ENST00000395573 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
CNIH1-202ENST00000395573 PLCH1Q4KWH8 1693 aa16.26■□□□□ 0.19
CNIH1-202ENST00000395573 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
CNIH1-202ENST00000395573 BRWD3Q6RI45 1802 aa16.25■□□□□ 0.19
CNIH1-202ENST00000395573 USP21Q9UK80 565 aa16.25■□□□□ 0.19
CNIH1-202ENST00000395573 ADGRB1O14514 1584 aa16.25■□□□□ 0.19
CNIH1-202ENST00000395573 SIRT1Q96EB6 747 aa16.24■□□□□ 0.19
CNIH1-202ENST00000395573 NWD2Q9ULI1 1742 aa16.24■□□□□ 0.19
CNIH1-202ENST00000395573 TRPM3Q9HCF6 1732 aaPredicted RBP16.22■□□□□ 0.19
CNIH1-202ENST00000395573 ATRNO75882 1429 aa16.22■□□□□ 0.19
CNIH1-202ENST00000395573 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
CNIH1-202ENST00000395573 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
CNIH1-202ENST00000395573 PRAM1Q96QH2 718 aa16.22■□□□□ 0.19
CNIH1-202ENST00000395573 TRPC5Q9UL62 973 aaPredicted RBP16.22■□□□□ 0.19
CNIH1-202ENST00000395573 POGKQ9P215 609 aa16.2■□□□□ 0.18
CNIH1-202ENST00000395573 ALS2Q96Q42 1657 aa16.2■□□□□ 0.18
CNIH1-202ENST00000395573 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 TNS3Q68CZ2 1445 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 KIAA1210Q9ULL0 1709 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 BCL9LQ86UU0 1499 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 KRT28Q7Z3Y7 464 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 PHF8Q9UPP1 1060 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 KDM2AQ9Y2K7 1162 aa16.19■□□□□ 0.18
CNIH1-202ENST00000395573 DCAF11Q8TEB1 546 aa16.18■□□□□ 0.18
CNIH1-202ENST00000395573 ANKARQ7Z5J8 1434 aa16.18■□□□□ 0.18
CNIH1-202ENST00000395573 CRYBG1Q9Y4K1 1723 aa16.17■□□□□ 0.18
CNIH1-202ENST00000395573 GLI3P10071 1580 aa16.17■□□□□ 0.18
CNIH1-202ENST00000395573 ATAD2Q6PL18 1390 aa16.16■□□□□ 0.18
CNIH1-202ENST00000395573 TULP4Q9NRJ4 1543 aa16.16■□□□□ 0.18
CNIH1-202ENST00000395573 PSME1Q06323 249 aa16.16■□□□□ 0.18
CNIH1-202ENST00000395573 TRAK1Q9UPV9 953 aa16.16■□□□□ 0.18
CNIH1-202ENST00000395573 ATF5Q9Y2D1 282 aaPredicted RBP16.16■□□□□ 0.18
CNIH1-202ENST00000395573 SLIT2O94813 1529 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms