RNA–Protein interactions for RNA: ENST00000395377.2

TFAM-203, Transcript of transcription factor A, mitochondrial, humanhuman

TSL 2

Gene TFAM, Length 663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAM-203ENST00000395377 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
TFAM-203ENST00000395377 PLEKHG3A1L390 1219 aa11.58□□□□□ -0.56
TFAM-203ENST00000395377 PPEF1O14829 653 aaPredicted RBP11.58□□□□□ -0.56
TFAM-203ENST00000395377 MYSM1Q5VVJ2 828 aa11.58□□□□□ -0.56
TFAM-203ENST00000395377 RNF223E7ERA6 249 aa11.57□□□□□ -0.56
TFAM-203ENST00000395377 Q3C1V9 767 aa11.57□□□□□ -0.56
TFAM-203ENST00000395377 RSBN1LQ6PCB5 846 aaPredicted RBP11.57□□□□□ -0.56
TFAM-203ENST00000395377 SLC6A16Q9GZN6 736 aa11.57□□□□□ -0.56
TFAM-203ENST00000395377 PCDHB15Q9Y5E8 787 aa11.56□□□□□ -0.56
TFAM-203ENST00000395377 SPTLC1O15269 473 aa11.55□□□□□ -0.56
TFAM-203ENST00000395377 LIMD1Q9UGP4 676 aa11.55□□□□□ -0.56
TFAM-203ENST00000395377 DIXDC1Q155Q3 683 aa11.54□□□□□ -0.56
TFAM-203ENST00000395377 RIC3Q7Z5B4 369 aa11.54□□□□□ -0.56
TFAM-203ENST00000395377 USB1Q9BQ65 265 aaKnown RBP11.54□□□□□ -0.56
TFAM-203ENST00000395377 GGCXP38435 758 aa11.53□□□□□ -0.56
TFAM-203ENST00000395377 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
TFAM-203ENST00000395377 ARXQ96QS3 562 aa11.53□□□□□ -0.56
TFAM-203ENST00000395377 C6orf229H3BNL8 230 aa11.52□□□□□ -0.57
TFAM-203ENST00000395377 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
TFAM-203ENST00000395377 CSPP1Q1MSJ5 1256 aa11.51□□□□□ -0.57
TFAM-203ENST00000395377 EMID1Q96A84 441 aaPredicted RBP11.51□□□□□ -0.57
TFAM-203ENST00000395377 POLR3EQ9NVU0 708 aa11.51□□□□□ -0.57
TFAM-203ENST00000395377 GJA5P36382 358 aa11.5□□□□□ -0.57
TFAM-203ENST00000395377 PLA2G2CQ5R387 149 aa11.5□□□□□ -0.57
TFAM-203ENST00000395377 IL27Q8NEV9 243 aa11.5□□□□□ -0.57
TFAM-203ENST00000395377 RETREG3Q86VR2 466 aa11.49□□□□□ -0.57
TFAM-203ENST00000395377 ANKLE1Q8NAG6 615 aa11.49□□□□□ -0.57
TFAM-203ENST00000395377 CABLES1Q8TDN4 633 aa11.49□□□□□ -0.57
TFAM-203ENST00000395377 CLK2P49760 499 aaKnown RBP11.48□□□□□ -0.57
TFAM-203ENST00000395377 QPCTQ16769 361 aa11.48□□□□□ -0.57
TFAM-203ENST00000395377 HRCP23327 699 aa11.47□□□□□ -0.57
TFAM-203ENST00000395377 MMP16P51512 607 aa11.47□□□□□ -0.57
TFAM-203ENST00000395377 MTMR2Q13614 643 aa11.47□□□□□ -0.57
TFAM-203ENST00000395377 PRKD2Q9BZL6 878 aa11.47□□□□□ -0.57
TFAM-203ENST00000395377 RSPH6AQ9H0K4 717 aa11.47□□□□□ -0.57
TFAM-203ENST00000395377 FCF1Q9Y324 198 aaKnown RBP11.47□□□□□ -0.57
TFAM-203ENST00000395377 RGS20O76081 388 aa11.46□□□□□ -0.57
TFAM-203ENST00000395377 DXOO77932 396 aaKnown RBP11.46□□□□□ -0.57
TFAM-203ENST00000395377 SH3D19Q5HYK7 790 aa11.46□□□□□ -0.57
TFAM-203ENST00000395377 FBXO31Q5XUX0 539 aaPredicted RBP11.45□□□□□ -0.58
TFAM-203ENST00000395377 PROCA1Q8NCQ7 364 aaPredicted RBP11.45□□□□□ -0.58
TFAM-203ENST00000395377 JUNDP17535 347 aa11.44□□□□□ -0.58
TFAM-203ENST00000395377 PRR7Q8TB68 274 aa11.44□□□□□ -0.58
TFAM-203ENST00000395377 CFAP99D6REC4 459 aa11.43□□□□□ -0.58
TFAM-203ENST00000395377 SUPT5HO00267 1087 aaKnown RBP11.43□□□□□ -0.58
TFAM-203ENST00000395377 SKIV2LQ15477 1246 aaKnown RBP11.43□□□□□ -0.58
TFAM-203ENST00000395377 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
TFAM-203ENST00000395377 LIAT1Q6ZQX7 453 aa11.43□□□□□ -0.58
TFAM-203ENST00000395377 ZBTB3Q9H5J0 574 aa11.43□□□□□ -0.58
TFAM-203ENST00000395377 LILRB3O75022 631 aa11.42□□□□□ -0.58
TFAM-203ENST00000395377 RTL5Q5HYW3 569 aaPredicted RBP11.42□□□□□ -0.58
TFAM-203ENST00000395377 PRPF38BQ5VTL8 546 aaKnown RBP11.42□□□□□ -0.58
TFAM-203ENST00000395377 SPDYE5A6NIY4 337 aa11.4□□□□□ -0.58
TFAM-203ENST00000395377 SLC19A1P41440 591 aa11.4□□□□□ -0.58
TFAM-203ENST00000395377 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.39□□□□□ -0.59
TFAM-203ENST00000395377 V9GY48 417 aaPredicted RBP11.39□□□□□ -0.59
TFAM-203ENST00000395377 NUTM2BA6NNL0 878 aaPredicted RBP11.38□□□□□ -0.59
TFAM-203ENST00000395377 NUTM2EB1AL46 878 aaPredicted RBP11.38□□□□□ -0.59
TFAM-203ENST00000395377 NUTM2DQ5VT03 806 aaPredicted RBP11.38□□□□□ -0.59
TFAM-203ENST00000395377 NUTM2AQ8IVF1 878 aaPredicted RBP11.38□□□□□ -0.59
TFAM-203ENST00000395377 HOMEZQ8IX15 550 aa11.38□□□□□ -0.59
TFAM-203ENST00000395377 CCDC24Q8N4L8 307 aa11.36□□□□□ -0.59
TFAM-203ENST00000395377 SPRYD7Q5W111 196 aa11.35□□□□□ -0.59
TFAM-203ENST00000395377 DESI1Q6ICB0 168 aa11.35□□□□□ -0.59
TFAM-203ENST00000395377 NUDT12Q9BQG2 462 aa11.35□□□□□ -0.59
TFAM-203ENST00000395377 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
TFAM-203ENST00000395377 PTCRAQ6ISU1 281 aaPredicted RBP11.34□□□□□ -0.59
TFAM-203ENST00000395377 GOPCQ9HD26 462 aa11.34□□□□□ -0.59
TFAM-203ENST00000395377 ATP1B4Q9UN42 357 aaPredicted RBP11.34□□□□□ -0.59
TFAM-203ENST00000395377 PTPRNQ16849 979 aa11.33□□□□□ -0.6
TFAM-203ENST00000395377 TSC1Q92574 1164 aa11.33□□□□□ -0.6
TFAM-203ENST00000395377 LYPD8Q6UX82 237 aa11.32□□□□□ -0.6
TFAM-203ENST00000395377 CCNYL3P0C7X3 344 aa11.31□□□□□ -0.6
TFAM-203ENST00000395377 RPIAP49247 311 aa11.31□□□□□ -0.6
TFAM-203ENST00000395377 PPP2R2DQ66LE6 453 aa11.31□□□□□ -0.6
TFAM-203ENST00000395377 ZNF697Q5TEC3 545 aa11.3□□□□□ -0.6
TFAM-203ENST00000395377 ZNF598Q86UK7 904 aaKnown RBP11.3□□□□□ -0.6
TFAM-203ENST00000395377 PCMTD1Q96MG8 357 aaPredicted RBP11.3□□□□□ -0.6
TFAM-203ENST00000395377 TRIM67Q6ZTA4 783 aa11.29□□□□□ -0.6
TFAM-203ENST00000395377 EVA1BQ9NVM1 165 aa11.29□□□□□ -0.6
TFAM-203ENST00000395377 ZBTB24O43167 697 aaPredicted RBP11.28□□□□□ -0.6
TFAM-203ENST00000395377 TRIM32Q13049 653 aa11.28□□□□□ -0.6
TFAM-203ENST00000395377 MAP10Q9P2G4 905 aa11.28□□□□□ -0.6
TFAM-203ENST00000395377 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
TFAM-203ENST00000395377 F12P00748 615 aaPredicted RBP11.26□□□□□ -0.61
TFAM-203ENST00000395377 KCNH2Q12809 1159 aa11.26□□□□□ -0.61
TFAM-203ENST00000395377 HELBQ8NG08 1087 aaPredicted RBP11.26□□□□□ -0.61
TFAM-203ENST00000395377 IRX2Q9BZI1 471 aaPredicted RBP11.26□□□□□ -0.61
TFAM-203ENST00000395377 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
TFAM-203ENST00000395377 CD2BP2O95400 341 aaKnown RBP11.25□□□□□ -0.61
TFAM-203ENST00000395377 RFC5P40937 340 aa11.25□□□□□ -0.61
TFAM-203ENST00000395377 UNC93B1Q9H1C4 597 aa11.25□□□□□ -0.61
TFAM-203ENST00000395377 PKD2L1Q9P0L9 805 aa11.25□□□□□ -0.61
TFAM-203ENST00000395377 CTHP32929 405 aa11.24□□□□□ -0.61
TFAM-203ENST00000395377 LRRN4Q8WUT4 740 aa11.24□□□□□ -0.61
TFAM-203ENST00000395377 GDF9O60383 454 aa11.23□□□□□ -0.61
TFAM-203ENST00000395377 AP1G2O75843 785 aa11.23□□□□□ -0.61
TFAM-203ENST00000395377 SKOR1P84550 965 aa11.23□□□□□ -0.61
TFAM-203ENST00000395377 TNFRSF10AO00220 468 aa11.22□□□□□ -0.61
TFAM-203ENST00000395377 FOXC1Q12948 553 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms