RNA–Protein interactions for RNA: ENST00000395358.7

RAPGEF3-202, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2 BASIC

Gene RAPGEF3, Length 4,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-202ENST00000395358 SRPK2P78362 688 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-202ENST00000395358 XRCC6P12956 609 aaKnown RBP eCLIP14.28□□□□□ -0.12
RAPGEF3-202ENST00000395358 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
RAPGEF3-202ENST00000395358 UQCRHLA0A096LP55 91 aa14.27□□□□□ -0.12
RAPGEF3-202ENST00000395358 UQCRHP07919 91 aa14.27□□□□□ -0.12
RAPGEF3-202ENST00000395358 NBPF8Q3BBV2 869 aa14.27□□□□□ -0.12
RAPGEF3-202ENST00000395358 USP47Q96K76 1375 aa14.27□□□□□ -0.12
RAPGEF3-202ENST00000395358 RRP1P56182 461 aaKnown RBP14.27□□□□□ -0.13
RAPGEF3-202ENST00000395358 SMAP1Q8IYB5 467 aaPredicted RBP14.27□□□□□ -0.13
RAPGEF3-202ENST00000395358 CGNQ9P2M7 1197 aaKnown RBP14.27□□□□□ -0.13
RAPGEF3-202ENST00000395358 CROCC2H7BZ55 1655 aa14.26□□□□□ -0.13
RAPGEF3-202ENST00000395358 ANKLE2Q86XL3 938 aa14.26□□□□□ -0.13
RAPGEF3-202ENST00000395358 MAP3K4Q9Y6R4 1608 aa14.25□□□□□ -0.13
RAPGEF3-202ENST00000395358 TMEM132EQ6IEE7 984 aa14.25□□□□□ -0.13
RAPGEF3-202ENST00000395358 GRPEL1Q9HAV7 217 aa14.25□□□□□ -0.13
RAPGEF3-202ENST00000395358 KNSTRNQ9Y448 316 aa14.24□□□□□ -0.13
RAPGEF3-202ENST00000395358 TRAK2O60296 914 aa14.24□□□□□ -0.13
RAPGEF3-202ENST00000395358 NBPF1Q3BBV0 1214 aa14.24□□□□□ -0.13
RAPGEF3-202ENST00000395358 HAP1P54257 671 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 CCDC184Q52MB2 194 aa14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 PRKRIP1Q9H875 184 aaPredicted RBP14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 SKAP1Q86WV1 359 aa14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 CBX1P83916 185 aa14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 DHX37Q8IY37 1157 aaKnown RBP14.23□□□□□ -0.13
RAPGEF3-202ENST00000395358 PPP4R3BQ5MIZ7 849 aa14.22□□□□□ -0.13
RAPGEF3-202ENST00000395358 PLIN1O60240 522 aa14.22□□□□□ -0.13
RAPGEF3-202ENST00000395358 PTMSP20962 102 aa14.21□□□□□ -0.13
RAPGEF3-202ENST00000395358 NPATQ14207 1427 aa14.21□□□□□ -0.13
RAPGEF3-202ENST00000395358 KDM5DQ9BY66 1539 aa14.21□□□□□ -0.13
RAPGEF3-202ENST00000395358 KDM5CP41229 1560 aa14.21□□□□□ -0.14
RAPGEF3-202ENST00000395358 INO80Q9ULG1 1556 aaPredicted RBP14.21□□□□□ -0.14
RAPGEF3-202ENST00000395358 CENPJQ9HC77 1338 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF3-202ENST00000395358 DDX11L8A8MPP1 907 aa14.2□□□□□ -0.14
RAPGEF3-202ENST00000395358 IRX3P78415 501 aaPredicted RBP14.2□□□□□ -0.14
RAPGEF3-202ENST00000395358 ADGRF5Q8IZF2 1346 aa14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 COL17A1Q9UMD9 1497 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 GBP4Q96PP9 640 aa14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 CHAF1AQ13111 956 aaPredicted RBP14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 FTSJ3Q8IY81 847 aaKnown RBP14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 SLC26A8Q96RN1 970 aa14.19□□□□□ -0.14
RAPGEF3-202ENST00000395358 TAF3Q5VWG9 929 aa14.18□□□□□ -0.14
RAPGEF3-202ENST00000395358 HSCBQ8IWL3 235 aa14.18□□□□□ -0.14
RAPGEF3-202ENST00000395358 NOS1P29475 1434 aa14.18□□□□□ -0.14
RAPGEF3-202ENST00000395358 CSPP1Q1MSJ5 1256 aa14.18□□□□□ -0.14
RAPGEF3-202ENST00000395358 DIP2CQ9Y2E4 1556 aa14.18□□□□□ -0.14
RAPGEF3-202ENST00000395358 EVC2Q86UK5 1308 aa14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 CFAP65Q6ZU64 1925 aaKnown RBP14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 MINK1Q8N4C8 1332 aaPredicted RBP14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 KIDINS220Q9ULH0 1771 aa14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 ZSCAN30Q86W11 494 aa14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
RAPGEF3-202ENST00000395358 HSP90AB1P08238 724 aaKnown RBP14.16□□□□□ -0.14
RAPGEF3-202ENST00000395358 GTF2E1P29083 439 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-202ENST00000395358 HDGFL2Q7Z4V5 671 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-202ENST00000395358 NASPP49321 788 aaPredicted RBP14.15□□□□□ -0.14
RAPGEF3-202ENST00000395358 BRD2P25440 801 aaKnown RBP14.15□□□□□ -0.14
RAPGEF3-202ENST00000395358 KIAA2012Q0VF49 1180 aa14.15□□□□□ -0.14
RAPGEF3-202ENST00000395358 EIF2AK4Q9P2K8 1649 aaKnown RBP14.14□□□□□ -0.15
RAPGEF3-202ENST00000395358 ABCC3O15438 1527 aa14.14□□□□□ -0.15
RAPGEF3-202ENST00000395358 ABCA6Q8N139 1617 aa14.14□□□□□ -0.15
RAPGEF3-202ENST00000395358 UNC13BO14795 1591 aa14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 MCM4P33991 863 aa14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 CENPQQ7L2Z9 268 aaPredicted RBP14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 PRDM4Q9UKN5 801 aa14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 ZMYM4Q5VZL5 1548 aa14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 C14orf93Q9H972 538 aaKnown RBP14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 IQGAP3Q86VI3 1631 aa14.13□□□□□ -0.15
RAPGEF3-202ENST00000395358 CCDC173Q0VFZ6 552 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 TERF2IPQ9NYB0 399 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 CHMP5Q9NZZ3 219 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 PLCB2Q00722 1185 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 PRAM1Q96QH2 718 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 ARHGAP31Q2M1Z3 1444 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 CCDC66A2RUB6 948 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 KCNJ4P48050 445 aa14.12□□□□□ -0.15
RAPGEF3-202ENST00000395358 NUTM2FA1L443 756 aa14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 PATL2C9JE40 543 aaKnown RBP14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 LETM1O95202 739 aaPredicted RBP14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 AGLP35573 1532 aa14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 ARHGEF40Q8TER5 1519 aa14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 TET3O43151 1660 aa14.11□□□□□ -0.15
RAPGEF3-202ENST00000395358 CC2D1BQ5T0F9 858 aaKnown RBP14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 ZFP91Q96JP5 570 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 PRDM15P57071 1507 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 PTPRTO14522 1441 aa14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 IGSF3O75054 1194 aa14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 XPCQ01831 940 aaPredicted RBP14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 EFCAB6Q5THR3 1501 aa14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 KIF20AO95235 890 aa14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 LMOD2Q6P5Q4 547 aa14.1□□□□□ -0.15
RAPGEF3-202ENST00000395358 KTN1Q86UP2 1357 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-202ENST00000395358 SMG6Q86US8 1419 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-202ENST00000395358 GTPBP4Q9BZE4 634 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-202ENST00000395358 ISY1Q9ULR0 285 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-202ENST00000395358 DDX49Q9Y6V7 483 aaKnown RBP14.09□□□□□ -0.15
RAPGEF3-202ENST00000395358 PRAG1Q86YV5 1406 aa14.08□□□□□ -0.15
RAPGEF3-202ENST00000395358 NGDNQ8NEJ9 315 aaKnown RBP14.08□□□□□ -0.16
RAPGEF3-202ENST00000395358 DYNC1I1O14576 645 aa14.08□□□□□ -0.16
RAPGEF3-202ENST00000395358 PROSER2Q86WR7 435 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms