RNA–Protein interactions for RNA: ENST00000395310.6

SEC31A-205, Transcript of SEC31 homolog A, COPII coat complex component, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SEC31A, Length 4,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC31A-205ENST00000395310 R3HCC1Q9Y3T6 440 aaKnown RBP16.24■□□□□ 0.19
SEC31A-205ENST00000395310 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
SEC31A-205ENST00000395310 ATF7IPQ6VMQ6 1270 aa16.23■□□□□ 0.19
SEC31A-205ENST00000395310 MCCP23508 829 aa16.23■□□□□ 0.19
SEC31A-205ENST00000395310 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
SEC31A-205ENST00000395310 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
SEC31A-205ENST00000395310 NUP153P49790 1475 aaKnown RBP16.23■□□□□ 0.19
SEC31A-205ENST00000395310 KCNJ4P48050 445 aa16.22■□□□□ 0.19
SEC31A-205ENST00000395310 SSH1Q8WYL5 1049 aa16.22■□□□□ 0.19
SEC31A-205ENST00000395310 ZNF608Q9ULD9 1512 aaPredicted RBP16.22■□□□□ 0.19
SEC31A-205ENST00000395310 KIF16BQ96L93 1317 aa16.21■□□□□ 0.19
SEC31A-205ENST00000395310 WDR63Q8IWG1 891 aa16.21■□□□□ 0.19
SEC31A-205ENST00000395310 THUMPD2Q9BTF0 503 aaKnown RBP16.21■□□□□ 0.19
SEC31A-205ENST00000395310 RRAGDQ9NQL2 400 aaPredicted RBP16.21■□□□□ 0.19
SEC31A-205ENST00000395310 PRAG1Q86YV5 1406 aa16.2■□□□□ 0.18
SEC31A-205ENST00000395310 KIAA2012Q0VF49 1180 aa16.2■□□□□ 0.18
SEC31A-205ENST00000395310 MAGI1Q96QZ7 1491 aaPredicted RBP16.2■□□□□ 0.18
SEC31A-205ENST00000395310 AAMPQ13685 434 aa16.2■□□□□ 0.18
SEC31A-205ENST00000395310 PLEKHH2Q8IVE3 1493 aa16.2■□□□□ 0.18
SEC31A-205ENST00000395310 NECTIN2Q92692 538 aa16.19■□□□□ 0.18
SEC31A-205ENST00000395310 NSD3Q9BZ95 1437 aa16.19■□□□□ 0.18
SEC31A-205ENST00000395310 PRPF40AO75400 957 aaKnown RBP16.19■□□□□ 0.18
SEC31A-205ENST00000395310 ADGRF5Q8IZF2 1346 aa16.19■□□□□ 0.18
SEC31A-205ENST00000395310 PRKAR2BP31323 418 aa16.19■□□□□ 0.18
SEC31A-205ENST00000395310 SYNJ2O15056 1496 aa16.19■□□□□ 0.18
SEC31A-205ENST00000395310 RTF1Q92541 710 aaKnown RBP16.19■□□□□ 0.18
SEC31A-205ENST00000395310 CHD1LQ86WJ1 897 aa16.18■□□□□ 0.18
SEC31A-205ENST00000395310 TRIM27P14373 513 aa16.18■□□□□ 0.18
SEC31A-205ENST00000395310 DRC7Q8IY82 874 aa16.18■□□□□ 0.18
SEC31A-205ENST00000395310 DENND4BO75064 1496 aaPredicted RBP16.17■□□□□ 0.18
SEC31A-205ENST00000395310 TNPO1Q92973 898 aaKnown RBP16.17■□□□□ 0.18
SEC31A-205ENST00000395310 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
SEC31A-205ENST00000395310 GOLGA6L4A6NEF3 574 aa16.16■□□□□ 0.18
SEC31A-205ENST00000395310 CDC45O75419 566 aa16.16■□□□□ 0.18
SEC31A-205ENST00000395310 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
SEC31A-205ENST00000395310 CCDC141Q6ZP82 1450 aa16.16■□□□□ 0.18
SEC31A-205ENST00000395310 TMPOP42166 694 aaKnown RBP16.15■□□□□ 0.18
SEC31A-205ENST00000395310 CFAP44Q96MT7 982 aa16.15■□□□□ 0.18
SEC31A-205ENST00000395310 SSFA2P28290 1259 aa16.15■□□□□ 0.18
SEC31A-205ENST00000395310 K7ELQ4 463 aaPredicted RBP16.14■□□□□ 0.17
SEC31A-205ENST00000395310 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 NAP1L2Q9ULW6 460 aaPredicted RBP16.14■□□□□ 0.17
SEC31A-205ENST00000395310 KDM5BQ9UGL1 1544 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 LAMC3Q9Y6N6 1575 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 HMMRO75330 724 aa16.14■□□□□ 0.17
SEC31A-205ENST00000395310 CDK11BP21127 795 aaKnown RBP16.14■□□□□ 0.17
SEC31A-205ENST00000395310 SYAP1Q96A49 352 aaPredicted RBP16.14■□□□□ 0.17
SEC31A-205ENST00000395310 CHAF1AQ13111 956 aaPredicted RBP16.13■□□□□ 0.17
SEC31A-205ENST00000395310 STAC3Q96MF2 364 aa16.13■□□□□ 0.17
SEC31A-205ENST00000395310 BCL11BQ9C0K0 894 aaPredicted RBP16.13■□□□□ 0.17
SEC31A-205ENST00000395310 RBM42Q9BTD8 480 aaKnown RBP16.13■□□□□ 0.17
SEC31A-205ENST00000395310 NINLQ9Y2I6 1382 aa16.13■□□□□ 0.17
SEC31A-205ENST00000395310 NUCB2P80303 420 aa16.13■□□□□ 0.17
SEC31A-205ENST00000395310 FBLN1P23142 703 aa16.12■□□□□ 0.17
SEC31A-205ENST00000395310 WDR62O43379 1518 aa16.12■□□□□ 0.17
SEC31A-205ENST00000395310 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
SEC31A-205ENST00000395310 INTS3Q68E01 1043 aaKnown RBP16.11■□□□□ 0.17
SEC31A-205ENST00000395310 STK31Q9BXU1 1019 aa16.11■□□□□ 0.17
SEC31A-205ENST00000395310 NEK4P51957 841 aa16.11■□□□□ 0.17
SEC31A-205ENST00000395310 FGD1P98174 961 aa16.11■□□□□ 0.17
SEC31A-205ENST00000395310 API5Q9BZZ5 524 aaKnown RBP16.11■□□□□ 0.17
SEC31A-205ENST00000395310 GPRASP1Q5JY77 1395 aa16.11■□□□□ 0.17
SEC31A-205ENST00000395310 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.11■□□□□ 0.17
SEC31A-205ENST00000395310 REC8O95072 547 aa16.1■□□□□ 0.17
SEC31A-205ENST00000395310 HAP1P54257 671 aaPredicted RBP16.1■□□□□ 0.17
SEC31A-205ENST00000395310 UHRF1BP1Q6BDS2 1440 aa16.1■□□□□ 0.17
SEC31A-205ENST00000395310 SCAPERQ9BY12 1400 aa16.1■□□□□ 0.17
SEC31A-205ENST00000395310 GRIN2AQ12879 1464 aa16.1■□□□□ 0.17
SEC31A-205ENST00000395310 TWISTNBQ3B726 338 aaPredicted RBP16.1■□□□□ 0.17
SEC31A-205ENST00000395310 IFT140Q96RY7 1462 aa16.09■□□□□ 0.17
SEC31A-205ENST00000395310 LTV1Q96GA3 475 aaPredicted RBP16.09■□□□□ 0.17
SEC31A-205ENST00000395310 DNMT1P26358 1616 aaKnown RBP16.09■□□□□ 0.17
SEC31A-205ENST00000395310 GNAI1P63096 354 aa16.09■□□□□ 0.17
SEC31A-205ENST00000395310 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
SEC31A-205ENST00000395310 LMOD3Q0VAK6 560 aa16.08■□□□□ 0.17
SEC31A-205ENST00000395310 GCC2Q8IWJ2 1684 aa16.08■□□□□ 0.17
SEC31A-205ENST00000395310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.08■□□□□ 0.16
SEC31A-205ENST00000395310 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
SEC31A-205ENST00000395310 PRAM1Q96QH2 718 aa16.08■□□□□ 0.16
SEC31A-205ENST00000395310 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.07■□□□□ 0.16
SEC31A-205ENST00000395310 CABP1Q9NZU7 370 aa16.07■□□□□ 0.16
SEC31A-205ENST00000395310 RRP9O43818 475 aaKnown RBP16.07■□□□□ 0.16
SEC31A-205ENST00000395310 DCTN1Q14203 1278 aa16.07■□□□□ 0.16
SEC31A-205ENST00000395310 GCC1Q96CN9 775 aa16.07■□□□□ 0.16
SEC31A-205ENST00000395310 SMARCA5O60264 1052 aaPredicted RBP16.06■□□□□ 0.16
SEC31A-205ENST00000395310 COG3Q96JB2 828 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 SAMD9Q5K651 1589 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 RAPGEF6Q8TEU7 1601 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 PRDM10Q9NQV6 1147 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 COL17A1Q9UMD9 1497 aaPredicted RBP16.06■□□□□ 0.16
SEC31A-205ENST00000395310 FAM135AQ9P2D6 1515 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 KIF14Q15058 1648 aa16.06■□□□□ 0.16
SEC31A-205ENST00000395310 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
SEC31A-205ENST00000395310 SCAF11Q99590 1463 aaKnown RBP16.05■□□□□ 0.16
SEC31A-205ENST00000395310 BCORL1Q5H9F3 1711 aa16.05■□□□□ 0.16
SEC31A-205ENST00000395310 RABEP1Q15276 862 aa16.05■□□□□ 0.16
SEC31A-205ENST00000395310 XPCQ01831 940 aaPredicted RBP16.05■□□□□ 0.16
SEC31A-205ENST00000395310 ZRSR1Q15695 479 aaKnown RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms