RNA–Protein interactions for RNA: ENST00000395047.6

VDAC1-203, Transcript of voltage dependent anion channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VDAC1, Length 1,873 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC1-203ENST00000395047 USP47Q96K76 1375 aa30.39■■■□□ 2.45
VDAC1-203ENST00000395047 CENPJQ9HC77 1338 aaPredicted RBP30.38■■■□□ 2.45
VDAC1-203ENST00000395047 EIF3AQ14152 1382 aaKnown RBP30.38■■■□□ 2.45
VDAC1-203ENST00000395047 MSH6P52701 1360 aa30.34■■■□□ 2.45
VDAC1-203ENST00000395047 ST20-MTHFSA0A0A6YYL1 179 aa30.34■■■□□ 2.45
VDAC1-203ENST00000395047 ADGRL3Q9HAR2 1447 aa30.34■■■□□ 2.45
VDAC1-203ENST00000395047 C19orf44Q9H6X5 657 aa30.33■■■□□ 2.45
VDAC1-203ENST00000395047 NCOA3Q9Y6Q9 1424 aa30.31■■■□□ 2.44
VDAC1-203ENST00000395047 NUTM2FA1L443 756 aa30.3■■■□□ 2.44
VDAC1-203ENST00000395047 EIF4G2P78344 907 aaKnown RBP eCLIP30.29■■■□□ 2.441e-9■■■■□ 22.4
VDAC1-203ENST00000395047 ATF3P18847 181 aa30.28■■■□□ 2.44
VDAC1-203ENST00000395047 HSPA5P11021 654 aaKnown RBP30.27■■■□□ 2.44
VDAC1-203ENST00000395047 CDC42BPGQ6DT37 1551 aa30.22■■■□□ 2.43
VDAC1-203ENST00000395047 UBAP1LF5GYI3 381 aa30.22■■■□□ 2.43
VDAC1-203ENST00000395047 CADPS2Q86UW7 1296 aa30.22■■■□□ 2.43
VDAC1-203ENST00000395047 IQSEC2Q5JU85 1478 aa30.21■■■□□ 2.43
VDAC1-203ENST00000395047 RGPD8O14715 1765 aaPredicted RBP30.21■■■□□ 2.43
VDAC1-203ENST00000395047 ADGRB2O60241 1585 aa30.21■■■□□ 2.43
VDAC1-203ENST00000395047 WASLO00401 505 aaPredicted RBP30.2■■■□□ 2.42
VDAC1-203ENST00000395047 TESK2Q96S53 571 aa30.2■■■□□ 2.42
VDAC1-203ENST00000395047 CDK19Q9BWU1 502 aa30.19■■■□□ 2.42
VDAC1-203ENST00000395047 FMN2Q9NZ56 1722 aa30.19■■■□□ 2.42
VDAC1-203ENST00000395047 SCAF1Q9H7N4 1312 aaKnown RBP30.18■■■□□ 2.42
VDAC1-203ENST00000395047 PIP4K2BP78356 416 aa30.18■■■□□ 2.42
VDAC1-203ENST00000395047 DCCP43146 1447 aa30.18■■■□□ 2.42
VDAC1-203ENST00000395047 TULP4Q9NRJ4 1543 aa30.18■■■□□ 2.42
VDAC1-203ENST00000395047 TOM1O60784 492 aa30.17■■■□□ 2.42
VDAC1-203ENST00000395047 SRPK2P78362 688 aaKnown RBP30.17■■■□□ 2.42
VDAC1-203ENST00000395047 CABP2Q9NPB3 220 aa30.16■■■□□ 2.42
VDAC1-203ENST00000395047 EVC2Q86UK5 1308 aa30.16■■■□□ 2.42
VDAC1-203ENST00000395047 SLAIN2Q9P270 581 aa30.16■■■□□ 2.42
VDAC1-203ENST00000395047 MST1RQ04912 1400 aa30.14■■■□□ 2.42
VDAC1-203ENST00000395047 SBNO2Q9Y2G9 1366 aa30.13■■■□□ 2.41
VDAC1-203ENST00000395047 USP32Q8NFA0 1604 aa30.11■■■□□ 2.41
VDAC1-203ENST00000395047 DISP3Q9P2K9 1392 aa30.11■■■□□ 2.41
VDAC1-203ENST00000395047 ORAI2Q96SN7 254 aa30.1■■■□□ 2.41
VDAC1-203ENST00000395047 C1orf167Q5SNV9 1468 aa30.1■■■□□ 2.41
VDAC1-203ENST00000395047 PRR36Q9H6K5 1346 aa30.09■■■□□ 2.41
VDAC1-203ENST00000395047 TMF1P82094 1093 aa30.09■■■□□ 2.41
VDAC1-203ENST00000395047 ESCO1Q5FWF5 840 aa30.09■■■□□ 2.41
VDAC1-203ENST00000395047 POLR3GLQ9BT43 218 aa30.08■■■□□ 2.41
VDAC1-203ENST00000395047 NUDT16Q96DE0 195 aaKnown RBP30.08■■■□□ 2.41
VDAC1-203ENST00000395047 ROBO1Q9Y6N7 1651 aa30.05■■■□□ 2.4
VDAC1-203ENST00000395047 ATP7BP35670 1465 aa30.05■■■□□ 2.4
VDAC1-203ENST00000395047 PMFBP1Q8TBY8 1022 aa30.04■■■□□ 2.4
VDAC1-203ENST00000395047 BRINP3Q76B58 766 aa30.02■■■□□ 2.4
VDAC1-203ENST00000395047 C11orf95C9JLR9 678 aaPredicted RBP30.02■■■□□ 2.4
VDAC1-203ENST00000395047 SLC24A1O60721 1099 aa30.02■■■□□ 2.4
VDAC1-203ENST00000395047 ANKARQ7Z5J8 1434 aa30.01■■■□□ 2.4
VDAC1-203ENST00000395047 ITSN1Q15811 1721 aa30.01■■■□□ 2.39
VDAC1-203ENST00000395047 DDX17Q92841 729 aaKnown RBP30■■■□□ 2.39
VDAC1-203ENST00000395047 TMC1Q8TDI8 760 aa29.99■■■□□ 2.39
VDAC1-203ENST00000395047 CCDC61Q9Y6R9 512 aa29.99■■■□□ 2.39
VDAC1-203ENST00000395047 TOPAZ1Q8N9V7 1692 aa29.98■■■□□ 2.39
VDAC1-203ENST00000395047 PHF8Q9UPP1 1060 aa29.97■■■□□ 2.39
VDAC1-203ENST00000395047 PPIP5K1Q6PFW1 1433 aa29.97■■■□□ 2.39
VDAC1-203ENST00000395047 CABP1Q9NZU7 370 aa29.97■■■□□ 2.39
VDAC1-203ENST00000395047 FOXO3O43524 673 aa29.95■■■□□ 2.39
VDAC1-203ENST00000395047 ATAD2Q6PL18 1390 aa29.95■■■□□ 2.39
VDAC1-203ENST00000395047 CDCA8Q53HL2 280 aa29.94■■■□□ 2.38
VDAC1-203ENST00000395047 XPCQ01831 940 aaPredicted RBP29.93■■■□□ 2.38
VDAC1-203ENST00000395047 NGDNQ8NEJ9 315 aaKnown RBP29.92■■■□□ 2.38
VDAC1-203ENST00000395047 SLC12A5Q9H2X9 1139 aa29.92■■■□□ 2.38
VDAC1-203ENST00000395047 KIF1AQ12756 1690 aa29.92■■■□□ 2.38
VDAC1-203ENST00000395047 FBXO41Q8TF61 875 aa29.91■■■□□ 2.38
VDAC1-203ENST00000395047 KIF7Q2M1P5 1343 aa29.9■■■□□ 2.38
VDAC1-203ENST00000395047 ACEP12821 1306 aa29.88■■■□□ 2.37
VDAC1-203ENST00000395047 PUS7Q96PZ0 661 aaKnown RBP29.87■■■□□ 2.37
VDAC1-203ENST00000395047 PHLPP1O60346 1717 aa29.87■■■□□ 2.37
VDAC1-203ENST00000395047 MYOM1P52179 1685 aa29.87■■■□□ 2.37
VDAC1-203ENST00000395047 NHSL1Q5SYE7 1610 aa29.86■■■□□ 2.37
VDAC1-203ENST00000395047 PLEKHG3A1L390 1219 aa29.86■■■□□ 2.37
VDAC1-203ENST00000395047 PSME1Q06323 249 aa29.86■■■□□ 2.37
VDAC1-203ENST00000395047 WASHC2AQ641Q2 1341 aa29.85■■■□□ 2.37
VDAC1-203ENST00000395047 NPHP3Q7Z494 1330 aa29.83■■■□□ 2.37
VDAC1-203ENST00000395047 CCDC7Q96M83 1385 aa29.82■■■□□ 2.37
VDAC1-203ENST00000395047 HSPA1LP34931 641 aa29.82■■■□□ 2.36
VDAC1-203ENST00000395047 KRT28Q7Z3Y7 464 aa29.81■■■□□ 2.36
VDAC1-203ENST00000395047 AKAP12Q02952 1782 aa29.81■■■□□ 2.36
VDAC1-203ENST00000395047 POLR3AO14802 1390 aaPredicted RBP29.8■■■□□ 2.36
VDAC1-203ENST00000395047 AHDC1Q5TGY3 1603 aaPredicted RBP29.8■■■□□ 2.36
VDAC1-203ENST00000395047 PAK3O75914 559 aaPredicted RBP29.78■■■□□ 2.36
VDAC1-203ENST00000395047 CD163L1Q9NR16 1453 aa29.78■■■□□ 2.36
VDAC1-203ENST00000395047 HDGFL2Q7Z4V5 671 aaPredicted RBP29.77■■■□□ 2.36
VDAC1-203ENST00000395047 A0A1W2PP64 1363 aa29.77■■■□□ 2.36
VDAC1-203ENST00000395047 PXDNQ92626 1479 aa29.77■■■□□ 2.36
VDAC1-203ENST00000395047 TERF2IPQ9NYB0 399 aa29.76■■■□□ 2.36
VDAC1-203ENST00000395047 KTN1Q86UP2 1357 aaKnown RBP29.76■■■□□ 2.35
VDAC1-203ENST00000395047 NINLQ9Y2I6 1382 aa29.76■■■□□ 2.35
VDAC1-203ENST00000395047 COL16A1Q07092 1604 aaPredicted RBP29.75■■■□□ 2.35
VDAC1-203ENST00000395047 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
VDAC1-203ENST00000395047 SOS2Q07890 1332 aaPredicted RBP29.75■■■□□ 2.35
VDAC1-203ENST00000395047 PLEKHG5O94827 1062 aa29.74■■■□□ 2.35
VDAC1-203ENST00000395047 CPSF1Q10570 1443 aaKnown RBP29.74■■■□□ 2.35
VDAC1-203ENST00000395047 MON2Q7Z3U7 1717 aa29.73■■■□□ 2.35
VDAC1-203ENST00000395047 USP6P35125 1406 aa29.73■■■□□ 2.35
VDAC1-203ENST00000395047 ANKRD36BQ8N2N9 1353 aa29.72■■■□□ 2.35
VDAC1-203ENST00000395047 ZNF316A6NFI3 1004 aaPredicted RBP29.72■■■□□ 2.35
VDAC1-203ENST00000395047 ZNF692Q9BU19 519 aaPredicted RBP29.72■■■□□ 2.35
VDAC1-203ENST00000395047 TRPM3Q9HCF6 1732 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms