RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 HSP90AB4PQ58FF6 505 aa20.81■□□□□ 0.92
SIN3A-203ENST00000394949 NOM1Q5C9Z4 860 aaKnown RBP20.81■□□□□ 0.92
SIN3A-203ENST00000394949 G3V3G9 751 aa20.81■□□□□ 0.92
SIN3A-203ENST00000394949 DCAF8Q5TAQ9 597 aa20.81■□□□□ 0.92
SIN3A-203ENST00000394949 MNS1Q8NEH6 495 aa20.81■□□□□ 0.92
SIN3A-203ENST00000394949 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.81■□□□□ 0.92
SIN3A-203ENST00000394949 PPP2R1AP30153 589 aa20.81■□□□□ 0.92
SIN3A-203ENST00000394949 ACBD3Q9H3P7 528 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 MCM4P33991 863 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 CCDC73Q6ZRK6 1079 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 CREBRFQ8IUR6 639 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 HOOK1Q9UJC3 728 aaKnown RBP20.8■□□□□ 0.92
SIN3A-203ENST00000394949 GCC1Q96CN9 775 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 TOMM22Q9NS69 142 aa20.8■□□□□ 0.92
SIN3A-203ENST00000394949 RAD54L2Q9Y4B4 1467 aa20.79■□□□□ 0.92
SIN3A-203ENST00000394949 RNF214Q8ND24 703 aa20.79■□□□□ 0.92
SIN3A-203ENST00000394949 HFM1A2PYH4 1435 aa20.79■□□□□ 0.92
SIN3A-203ENST00000394949 PRKCSHP14314 528 aaPredicted RBP20.79■□□□□ 0.92
SIN3A-203ENST00000394949 NCAPD3P42695 1498 aa20.78■□□□□ 0.92
SIN3A-203ENST00000394949 ZNF644Q9H582 1327 aaPredicted RBP20.78■□□□□ 0.92
SIN3A-203ENST00000394949 TTC5Q8N0Z6 440 aa20.78■□□□□ 0.92
SIN3A-203ENST00000394949 IPO7O95373 1038 aaKnown RBP20.78■□□□□ 0.92
SIN3A-203ENST00000394949 CT47B1P0C2W7 299 aaPredicted RBP20.78■□□□□ 0.92
SIN3A-203ENST00000394949 IFIT2P09913 472 aaKnown RBP20.77■□□□□ 0.92
SIN3A-203ENST00000394949 EVA1CP58658 441 aa20.77■□□□□ 0.92
SIN3A-203ENST00000394949 WDR97A6NE52 1622 aa20.77■□□□□ 0.92
SIN3A-203ENST00000394949 SCAPERQ9BY12 1400 aa20.77■□□□□ 0.92
SIN3A-203ENST00000394949 TCP11L2Q8N4U5 519 aa20.77■□□□□ 0.92
SIN3A-203ENST00000394949 ANKRD20A12PQ8NF67 263 aa20.77■□□□□ 0.92
SIN3A-203ENST00000394949 NAT10Q9H0A0 1025 aaKnown RBP20.77■□□□□ 0.92
SIN3A-203ENST00000394949 ERC2O15083 957 aa20.77■□□□□ 0.91
SIN3A-203ENST00000394949 PRPF40AO75400 957 aaKnown RBP20.76■□□□□ 0.91
SIN3A-203ENST00000394949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.75■□□□□ 0.919e-8■■■□□ 15.5
SIN3A-203ENST00000394949 C9orf78Q9NZ63 289 aaPredicted RBP20.75■□□□□ 0.91
SIN3A-203ENST00000394949 CWC15Q9P013 229 aaKnown RBP20.75■□□□□ 0.91
SIN3A-203ENST00000394949 FAM69CQ0P6D2 419 aa20.74■□□□□ 0.91
SIN3A-203ENST00000394949 K7ELQ4 463 aaPredicted RBP20.74■□□□□ 0.91
SIN3A-203ENST00000394949 PES1O00541 588 aaKnown RBP20.74■□□□□ 0.91
SIN3A-203ENST00000394949 PSME1Q06323 249 aa20.74■□□□□ 0.91
SIN3A-203ENST00000394949 TRIM29Q14134 588 aa20.74■□□□□ 0.91
SIN3A-203ENST00000394949 DDX58O95786 925 aaKnown RBP20.73■□□□□ 0.91
SIN3A-203ENST00000394949 SYNE3Q6ZMZ3 975 aa20.73■□□□□ 0.91
SIN3A-203ENST00000394949 HSP90B2PQ58FF3 399 aa20.73■□□□□ 0.91
SIN3A-203ENST00000394949 CPLX1O14810 134 aa20.72■□□□□ 0.91
SIN3A-203ENST00000394949 AKAP17AQ02040 695 aaKnown RBP20.72■□□□□ 0.91
SIN3A-203ENST00000394949 EIF2S2P20042 333 aaKnown RBP20.72■□□□□ 0.91
SIN3A-203ENST00000394949 DHX8Q14562 1220 aaKnown RBP20.71■□□□□ 0.91
SIN3A-203ENST00000394949 PDCP20941 246 aa20.71■□□□□ 0.91
SIN3A-203ENST00000394949 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
SIN3A-203ENST00000394949 RBM10P98175 930 aaKnown RBP20.71■□□□□ 0.91
SIN3A-203ENST00000394949 FKBP5Q13451 457 aaPredicted RBP20.71■□□□□ 0.91
SIN3A-203ENST00000394949 CCP110O43303 1012 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 NEK4P51957 841 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 CCDC184Q52MB2 194 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 TRIM5Q9C035 493 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 ZSCAN30Q86W11 494 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 PSMA5P28066 241 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 WDR63Q8IWG1 891 aa20.7■□□□□ 0.9
SIN3A-203ENST00000394949 CEP89Q96ST8 783 aa20.69■□□□□ 0.9
SIN3A-203ENST00000394949 KIAA1107Q9UPP5 1409 aa20.69■□□□□ 0.9
SIN3A-203ENST00000394949 BCAR3O75815 825 aa20.68■□□□□ 0.9
SIN3A-203ENST00000394949 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.95e-7■■■■■ 32.2
SIN3A-203ENST00000394949 G3BP1Q13283 466 aaKnown RBP eCLIP20.67■□□□□ 0.92e-6■■■■□ 22
SIN3A-203ENST00000394949 MTHFSP49914 203 aa20.67■□□□□ 0.9
SIN3A-203ENST00000394949 UQCRHLA0A096LP55 91 aa20.67■□□□□ 0.9
SIN3A-203ENST00000394949 UQCRHP07919 91 aa20.67■□□□□ 0.9
SIN3A-203ENST00000394949 AK7Q96M32 723 aa20.67■□□□□ 0.9
SIN3A-203ENST00000394949 MARCH6O60337 910 aa20.66■□□□□ 0.9
SIN3A-203ENST00000394949 MVPQ14764 893 aaKnown RBP20.66■□□□□ 0.9
SIN3A-203ENST00000394949 CCDC47Q96A33 483 aaKnown RBP20.66■□□□□ 0.9
SIN3A-203ENST00000394949 PRXQ9BXM0 1461 aa20.65■□□□□ 0.9
SIN3A-203ENST00000394949 ERCC4Q92889 916 aaPredicted RBP20.65■□□□□ 0.9
SIN3A-203ENST00000394949 GNAI3P08754 354 aa20.65■□□□□ 0.9
SIN3A-203ENST00000394949 EXOSC9Q06265 439 aaKnown RBP20.65■□□□□ 0.9
SIN3A-203ENST00000394949 EFCAB5A4FU69 1503 aa20.65■□□□□ 0.9
SIN3A-203ENST00000394949 CNTROBQ8N137 903 aa20.65■□□□□ 0.9
SIN3A-203ENST00000394949 WDR33Q9C0J8 1336 aaKnown RBP20.64■□□□□ 0.9
SIN3A-203ENST00000394949 GRIN2BQ13224 1484 aa20.64■□□□□ 0.9
SIN3A-203ENST00000394949 TIAM1Q13009 1591 aa20.64■□□□□ 0.9
SIN3A-203ENST00000394949 RAPGEF4Q8WZA2 1011 aa20.64■□□□□ 0.89
SIN3A-203ENST00000394949 CCDC192P0DO97 292 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 TRDNQ13061 729 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 SDF4Q9BRK5 362 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 PLEKHH2Q8IVE3 1493 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 EHBP1L1Q8N3D4 1523 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 RUFY1Q96T51 708 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
SIN3A-203ENST00000394949 TSPYL4Q9UJ04 414 aa20.62■□□□□ 0.89
SIN3A-203ENST00000394949 CDR1P51861 262 aa20.62■□□□□ 0.89
SIN3A-203ENST00000394949 AFAP1Q8N556 730 aa20.62■□□□□ 0.89
SIN3A-203ENST00000394949 OLFM4Q6UX06 510 aa20.61■□□□□ 0.89
SIN3A-203ENST00000394949 CFTRP13569 1480 aa20.61■□□□□ 0.89
SIN3A-203ENST00000394949 ATF7IPQ6VMQ6 1270 aa20.61■□□□□ 0.89
SIN3A-203ENST00000394949 KINO60870 393 aaKnown RBP20.6■□□□□ 0.89
SIN3A-203ENST00000394949 CCDC112Q8NEF3 446 aa20.6■□□□□ 0.89
SIN3A-203ENST00000394949 UBTFL1P0CB47 393 aaPredicted RBP20.6■□□□□ 0.89
SIN3A-203ENST00000394949 AEBP1Q8IUX7 1158 aa20.6■□□□□ 0.89
SIN3A-203ENST00000394949 SLFN5Q08AF3 891 aa20.59■□□□□ 0.89
SIN3A-203ENST00000394949 TAF3Q5VWG9 929 aa20.59■□□□□ 0.89
SIN3A-203ENST00000394949 CHD1LQ86WJ1 897 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms