RNA–Protein interactions for RNA: ENST00000394947.7

SIN3A-202, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 6,737 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-202ENST00000394947 SDF4Q9BRK5 362 aa14.75□□□□□ -0.05
SIN3A-202ENST00000394947 TRIM5Q9C035 493 aa14.75□□□□□ -0.05
SIN3A-202ENST00000394947 KRT18P05783 430 aaKnown RBP14.74□□□□□ -0.05
SIN3A-202ENST00000394947 RALYLQ86SE5 291 aaKnown RBP14.74□□□□□ -0.05
SIN3A-202ENST00000394947 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
SIN3A-202ENST00000394947 RIC3Q7Z5B4 369 aa14.74□□□□□ -0.05
SIN3A-202ENST00000394947 CAVIN1Q6NZI2 390 aaKnown RBP14.74□□□□□ -0.05
SIN3A-202ENST00000394947 PIBF1Q8WXW3 757 aa14.74□□□□□ -0.05
SIN3A-202ENST00000394947 CDK5RAP3Q96JB5 506 aa14.74□□□□□ -0.05
SIN3A-202ENST00000394947 RRP1P56182 461 aaKnown RBP14.74□□□□□ -0.05
SIN3A-202ENST00000394947 SYCP1Q15431 976 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
SIN3A-202ENST00000394947 APAF1O14727 1248 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 ERICH4A6NGS2 130 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 CHMP4BP1P59074 171 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 CHMP4AQ9BY43 222 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 REC8O95072 547 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 CT47B1P0C2W7 299 aaPredicted RBP14.73□□□□□ -0.05
SIN3A-202ENST00000394947 RNF20Q5VTR2 975 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 WWC2Q6AWC2 1192 aa14.73□□□□□ -0.05
SIN3A-202ENST00000394947 LRRFIP1Q32MZ4 808 aaKnown RBP14.72□□□□□ -0.05
SIN3A-202ENST00000394947 RIPK4P57078 832 aa14.72□□□□□ -0.05
SIN3A-202ENST00000394947 NASPP49321 788 aaPredicted RBP14.72□□□□□ -0.05
SIN3A-202ENST00000394947 TANGO6Q9C0B7 1094 aa14.71□□□□□ -0.05
SIN3A-202ENST00000394947 RBM25P49756 843 aaKnown RBP14.71□□□□□ -0.05
SIN3A-202ENST00000394947 BRMS1Q9HCU9 246 aa14.71□□□□□ -0.05
SIN3A-202ENST00000394947 ARHGAP35Q9NRY4 1499 aa14.71□□□□□ -0.05
SIN3A-202ENST00000394947 TTC16Q8NEE8 873 aa14.71□□□□□ -0.05
SIN3A-202ENST00000394947 MAGEC2Q9UBF1 373 aaPredicted RBP14.71□□□□□ -0.05
SIN3A-202ENST00000394947 KIF27Q86VH2 1401 aa14.71□□□□□ -0.06
SIN3A-202ENST00000394947 TAF3Q5VWG9 929 aa14.71□□□□□ -0.06
SIN3A-202ENST00000394947 PDCL3Q9H2J4 239 aa14.71□□□□□ -0.06
SIN3A-202ENST00000394947 MATR3P43243 847 aaKnown RBP eCLIP14.7□□□□□ -0.06
SIN3A-202ENST00000394947 SPINK5Q9NQ38 1064 aaPredicted RBP14.7□□□□□ -0.06
SIN3A-202ENST00000394947 PSME1Q06323 249 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 C1orf115Q9H7X2 142 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 EEA1Q15075 1411 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 LEKR1Q6ZMV7 388 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 L3MBTL2Q969R5 705 aa14.7□□□□□ -0.06
SIN3A-202ENST00000394947 PANK1Q8TE04 598 aa14.69□□□□□ -0.06
SIN3A-202ENST00000394947 CWC15Q9P013 229 aaKnown RBP14.69□□□□□ -0.06
SIN3A-202ENST00000394947 CHMP5Q9NZZ3 219 aa14.68□□□□□ -0.06
SIN3A-202ENST00000394947 INTS3Q68E01 1043 aaKnown RBP14.68□□□□□ -0.06
SIN3A-202ENST00000394947 NLRP13Q86W25 1043 aa14.68□□□□□ -0.06
SIN3A-202ENST00000394947 PRPF40AO75400 957 aaKnown RBP14.68□□□□□ -0.06
SIN3A-202ENST00000394947 BRPF3Q9ULD4 1205 aa14.68□□□□□ -0.06
SIN3A-202ENST00000394947 RAB3GAP2Q9H2M9 1393 aa14.68□□□□□ -0.06
SIN3A-202ENST00000394947 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
SIN3A-202ENST00000394947 SSR1P43307 286 aaKnown RBP14.67□□□□□ -0.06
SIN3A-202ENST00000394947 PSMD1Q99460 953 aa14.67□□□□□ -0.06
SIN3A-202ENST00000394947 FSD1Q9BTV5 496 aa14.67□□□□□ -0.06
SIN3A-202ENST00000394947 NAT10Q9H0A0 1025 aaKnown RBP14.67□□□□□ -0.06
SIN3A-202ENST00000394947 WRNQ14191 1432 aaPredicted RBP eCLIP14.67□□□□□ -0.06
SIN3A-202ENST00000394947 CCDC39Q9UFE4 941 aa14.67□□□□□ -0.06
SIN3A-202ENST00000394947 WDR70Q9NW82 654 aa14.67□□□□□ -0.06
SIN3A-202ENST00000394947 FIBPO43427 364 aa14.66□□□□□ -0.06
SIN3A-202ENST00000394947 C22orf23Q9BZE7 217 aa14.66□□□□□ -0.06
SIN3A-202ENST00000394947 DEF6Q9H4E7 631 aa14.66□□□□□ -0.06
SIN3A-202ENST00000394947 MYO6Q9UM54 1294 aa14.66□□□□□ -0.06
SIN3A-202ENST00000394947 TMX1Q9H3N1 280 aa14.66□□□□□ -0.06
SIN3A-202ENST00000394947 DDX58O95786 925 aaKnown RBP14.65□□□□□ -0.06
SIN3A-202ENST00000394947 SERPINC1P01008 464 aa14.65□□□□□ -0.06
SIN3A-202ENST00000394947 DZIP1LQ8IYY4 767 aaKnown RBP14.65□□□□□ -0.06
SIN3A-202ENST00000394947 CCDC181Q5TID7 509 aa14.65□□□□□ -0.06
SIN3A-202ENST00000394947 CLASRPQ8N2M8 674 aaKnown RBP14.65□□□□□ -0.06
SIN3A-202ENST00000394947 RBM5P52756 815 aaKnown RBP eCLIP14.65□□□□□ -0.06
SIN3A-202ENST00000394947 ZRSR2Q15696 482 aaKnown RBP14.64□□□□□ -0.07
SIN3A-202ENST00000394947 CEP164Q9UPV0 1460 aa14.64□□□□□ -0.07
SIN3A-202ENST00000394947 MYBBP1AQ9BQG0 1328 aaKnown RBP14.64□□□□□ -0.07
SIN3A-202ENST00000394947 E9PSI1 815 aa14.64□□□□□ -0.07
SIN3A-202ENST00000394947 NFKBIBQ15653 356 aa14.64□□□□□ -0.07
SIN3A-202ENST00000394947 ERCC4Q92889 916 aaPredicted RBP14.63□□□□□ -0.07
SIN3A-202ENST00000394947 SMARCE1Q969G3 411 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 GOLGA6L10A6NI86 522 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
SIN3A-202ENST00000394947 SIL1Q9H173 461 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 NEBLO76041 1014 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 PUS7Q96PZ0 661 aaKnown RBP14.63□□□□□ -0.07
SIN3A-202ENST00000394947 KIF15Q9NS87 1388 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 XBP1P17861 261 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 IL27Q8NEV9 243 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 LRRFIP2Q9Y608 721 aaKnown RBP14.63□□□□□ -0.07
SIN3A-202ENST00000394947 SSBP05455 408 aaKnown RBP eCLIP14.63□□□□□ -0.07
SIN3A-202ENST00000394947 TICAM2Q86XR7 235 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 TSPY26PQ9H489 355 aa14.63□□□□□ -0.07
SIN3A-202ENST00000394947 AEBP2Q6ZN18 517 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-202ENST00000394947 PRDM10Q9NQV6 1147 aa14.62□□□□□ -0.07
SIN3A-202ENST00000394947 KIAA0754O94854 1291 aa14.62□□□□□ -0.07
SIN3A-202ENST00000394947 DDX19BQ9UMR2 479 aa14.62□□□□□ -0.07
SIN3A-202ENST00000394947 MYCNP04198 464 aaPredicted RBP14.62□□□□□ -0.07
SIN3A-202ENST00000394947 FILIP1LQ4L180 1135 aa14.62□□□□□ -0.07
SIN3A-202ENST00000394947 NUP133Q8WUM0 1156 aa14.62□□□□□ -0.07
SIN3A-202ENST00000394947 GOLGA6L10A0A0M3HER8 536 aa14.61□□□□□ -0.07
SIN3A-202ENST00000394947 C11orf95C9JLR9 678 aaPredicted RBP14.61□□□□□ -0.07
SIN3A-202ENST00000394947 SERPINA10Q9UK55 444 aa14.61□□□□□ -0.07
SIN3A-202ENST00000394947 DIAPH1O60610 1272 aaKnown RBP14.61□□□□□ -0.07
SIN3A-202ENST00000394947 ERC2O15083 957 aa14.61□□□□□ -0.07
SIN3A-202ENST00000394947 KINO60870 393 aaKnown RBP14.61□□□□□ -0.07
SIN3A-202ENST00000394947 CCDC113Q9H0I3 377 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms