RNA–Protein interactions for RNA: ENST00000394853.8

PPP3CA-202, Transcript of protein phosphatase 3 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP3CA, Length 3,604 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CA-202ENST00000394853 PPM1GO15355 546 aaPredicted RBP18.62■□□□□ 0.57
PPP3CA-202ENST00000394853 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
PPP3CA-202ENST00000394853 ANP32EQ9BTT0 268 aa18.61■□□□□ 0.57
PPP3CA-202ENST00000394853 NEXMIFQ5QGS0 1516 aa18.61■□□□□ 0.57
PPP3CA-202ENST00000394853 PDIA4P13667 645 aaKnown RBP18.6■□□□□ 0.57
PPP3CA-202ENST00000394853 PRAM1Q96QH2 718 aa18.6■□□□□ 0.57
PPP3CA-202ENST00000394853 CCDC146Q8IYE0 955 aa18.6■□□□□ 0.57
PPP3CA-202ENST00000394853 ADGRB1O14514 1584 aa18.6■□□□□ 0.57
PPP3CA-202ENST00000394853 PIK3C2BO00750 1634 aa18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 KDM5AP29375 1690 aaKnown RBP18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 B4GALNT3Q6L9W6 998 aa18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 ARXQ96QS3 562 aa18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 PDE4CQ08493 712 aa18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 ASXL1Q8IXJ9 1541 aa18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 SMG6Q86US8 1419 aaKnown RBP18.59■□□□□ 0.57
PPP3CA-202ENST00000394853 MYO5BQ9ULV0 1848 aa18.58■□□□□ 0.57
PPP3CA-202ENST00000394853 PREX1Q8TCU6 1659 aa18.58■□□□□ 0.56
PPP3CA-202ENST00000394853 PAK3O75914 559 aaPredicted RBP18.58■□□□□ 0.56
PPP3CA-202ENST00000394853 EVC2Q86UK5 1308 aa18.58■□□□□ 0.56
PPP3CA-202ENST00000394853 ZC3H13Q5T200 1668 aaKnown RBP18.57■□□□□ 0.56
PPP3CA-202ENST00000394853 MORC1Q86VD1 984 aa18.56■□□□□ 0.56
PPP3CA-202ENST00000394853 KIF13AQ9H1H9 1805 aa18.56■□□□□ 0.56
PPP3CA-202ENST00000394853 NSD3Q9BZ95 1437 aa18.56■□□□□ 0.56
PPP3CA-202ENST00000394853 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
PPP3CA-202ENST00000394853 CLTCQ00610 1675 aaKnown RBP18.56■□□□□ 0.56
PPP3CA-202ENST00000394853 WAPLQ7Z5K2 1190 aa18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 PROSER2Q86WR7 435 aaPredicted RBP18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 MYOM1P52179 1685 aa18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 SETBP1Q9Y6X0 1596 aa18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 HAP1P54257 671 aaPredicted RBP18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 NGDNQ8NEJ9 315 aaKnown RBP18.55■□□□□ 0.56
PPP3CA-202ENST00000394853 SBNO2Q9Y2G9 1366 aa18.54■□□□□ 0.56
PPP3CA-202ENST00000394853 A0A0U1RQG5 324 aaPredicted RBP18.54■□□□□ 0.56
PPP3CA-202ENST00000394853 TMEM131LA2VDJ0 1609 aa18.52■□□□□ 0.56
PPP3CA-202ENST00000394853 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
PPP3CA-202ENST00000394853 PPP4R2Q9NY27 417 aa18.52■□□□□ 0.56
PPP3CA-202ENST00000394853 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
PPP3CA-202ENST00000394853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.51■□□□□ 0.55
PPP3CA-202ENST00000394853 AGLP35573 1532 aa18.49■□□□□ 0.55
PPP3CA-202ENST00000394853 RCAN3Q9UKA8 241 aa18.49■□□□□ 0.55
PPP3CA-202ENST00000394853 AMOTL2Q9Y2J4 779 aa18.49■□□□□ 0.55
PPP3CA-202ENST00000394853 YTHDC2Q9H6S0 1430 aaKnown RBP18.49■□□□□ 0.55
PPP3CA-202ENST00000394853 RIMS2Q9UQ26 1411 aa18.48■□□□□ 0.55
PPP3CA-202ENST00000394853 APAF1O14727 1248 aa18.48■□□□□ 0.55
PPP3CA-202ENST00000394853 NEFMP07197 916 aa18.48■□□□□ 0.55
PPP3CA-202ENST00000394853 NCKAP5LQ9HCH0 1330 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 NEUROD2Q15784 382 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 ZFYVE9O95405 1425 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 CGNL1Q0VF96 1302 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 CDK19Q9BWU1 502 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 GGNBP2Q9H3C7 697 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 A2ML1A8K2U0 1454 aa18.47■□□□□ 0.55
PPP3CA-202ENST00000394853 ARHGEF40Q8TER5 1519 aa18.46■□□□□ 0.55
PPP3CA-202ENST00000394853 MYO3AQ8NEV4 1616 aa18.46■□□□□ 0.55
PPP3CA-202ENST00000394853 TERF2IPQ9NYB0 399 aa18.46■□□□□ 0.55
PPP3CA-202ENST00000394853 NPC1L1Q9UHC9 1359 aa18.46■□□□□ 0.55
PPP3CA-202ENST00000394853 PLIN1O60240 522 aa18.46■□□□□ 0.55
PPP3CA-202ENST00000394853 TULP4Q9NRJ4 1543 aa18.46■□□□□ 0.54
PPP3CA-202ENST00000394853 MTHFSP49914 203 aa18.45■□□□□ 0.54
PPP3CA-202ENST00000394853 BLMP54132 1417 aaPredicted RBP18.45■□□□□ 0.54
PPP3CA-202ENST00000394853 CABP1Q9NZU7 370 aa18.44■□□□□ 0.54
PPP3CA-202ENST00000394853 PLEKHH1Q9ULM0 1364 aa18.44■□□□□ 0.54
PPP3CA-202ENST00000394853 LTKP29376 864 aa18.44■□□□□ 0.54
PPP3CA-202ENST00000394853 PDE3BQ13370 1112 aa18.44■□□□□ 0.54
PPP3CA-202ENST00000394853 ATF3P18847 181 aa18.43■□□□□ 0.54
PPP3CA-202ENST00000394853 ARHGEF28Q8N1W1 1705 aaKnown RBP18.43■□□□□ 0.54
PPP3CA-202ENST00000394853 PMFBP1Q8TBY8 1022 aa18.43■□□□□ 0.54
PPP3CA-202ENST00000394853 REREQ9P2R6 1566 aa18.43■□□□□ 0.54
PPP3CA-202ENST00000394853 ALKQ9UM73 1620 aa18.42■□□□□ 0.54
PPP3CA-202ENST00000394853 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
PPP3CA-202ENST00000394853 A0A1W2PP64 1363 aa18.41■□□□□ 0.54
PPP3CA-202ENST00000394853 RRP1P56182 461 aaKnown RBP18.41■□□□□ 0.54
PPP3CA-202ENST00000394853 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
PPP3CA-202ENST00000394853 PTPRMP28827 1452 aa18.4■□□□□ 0.54
PPP3CA-202ENST00000394853 ANKRD36BQ8N2N9 1353 aa18.4■□□□□ 0.54
PPP3CA-202ENST00000394853 METP08581 1390 aa18.39■□□□□ 0.54
PPP3CA-202ENST00000394853 SPATA31D1Q6ZQQ2 1576 aa18.39■□□□□ 0.54
PPP3CA-202ENST00000394853 FBLN1P23142 703 aa18.39■□□□□ 0.53
PPP3CA-202ENST00000394853 EXOC6Q8TAG9 804 aa18.38■□□□□ 0.53
PPP3CA-202ENST00000394853 GOLGA2Q08379 1002 aa18.38■□□□□ 0.53
PPP3CA-202ENST00000394853 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
PPP3CA-202ENST00000394853 RNF123Q5XPI4 1314 aa18.38■□□□□ 0.53
PPP3CA-202ENST00000394853 PSME1Q06323 249 aa18.37■□□□□ 0.53
PPP3CA-202ENST00000394853 SPINK5Q9NQ38 1064 aaPredicted RBP18.37■□□□□ 0.53
PPP3CA-202ENST00000394853 NUTM2GQ5VZR2 741 aa18.36■□□□□ 0.53
PPP3CA-202ENST00000394853 U2SURPO15042 1029 aaKnown RBP18.36■□□□□ 0.53
PPP3CA-202ENST00000394853 CFAP53Q96M91 514 aa18.36■□□□□ 0.53
PPP3CA-202ENST00000394853 DMRT2Q9Y5R5 561 aa18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 FYB1O15117 783 aa18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 U2AF1L5P0DN76 240 aaPredicted RBP18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 U2AF1Q01081 240 aaKnown RBP eCLIP18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 ATAD2Q6PL18 1390 aa18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 PUS7Q96PZ0 661 aaKnown RBP18.35■□□□□ 0.53
PPP3CA-202ENST00000394853 DHX37Q8IY37 1157 aaKnown RBP18.34■□□□□ 0.53
PPP3CA-202ENST00000394853 DUSP27Q5VZP5 1158 aa18.34■□□□□ 0.53
PPP3CA-202ENST00000394853 BCL11BQ9C0K0 894 aaPredicted RBP18.33■□□□□ 0.53
PPP3CA-202ENST00000394853 KCNA6P17658 529 aa18.33■□□□□ 0.52
PPP3CA-202ENST00000394853 POLR3AO14802 1390 aaPredicted RBP18.32■□□□□ 0.52
PPP3CA-202ENST00000394853 TMEM2Q9UHN6 1383 aa18.32■□□□□ 0.52
PPP3CA-202ENST00000394853 RBM19Q9Y4C8 960 aaKnown RBP18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms