RNA–Protein interactions for RNA: ENST00000394821.2

SLC6A4-202, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-202ENST00000394821 EVC2Q86UK5 1308 aa23.22■■□□□ 1.31
SLC6A4-202ENST00000394821 SLC12A5Q9H2X9 1139 aa23.21■■□□□ 1.31
SLC6A4-202ENST00000394821 MRS2Q9HD23 443 aa23.21■■□□□ 1.31
SLC6A4-202ENST00000394821 KNDC1Q76NI1 1749 aa23.2■■□□□ 1.3
SLC6A4-202ENST00000394821 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
SLC6A4-202ENST00000394821 TBX22Q9Y458 520 aa23.2■■□□□ 1.3
SLC6A4-202ENST00000394821 TMC1Q8TDI8 760 aa23.2■■□□□ 1.3
SLC6A4-202ENST00000394821 TECPR2O15040 1411 aa23.19■■□□□ 1.3
SLC6A4-202ENST00000394821 NCKAP5LQ9HCH0 1330 aa23.18■■□□□ 1.3
SLC6A4-202ENST00000394821 SRPK2P78362 688 aaKnown RBP23.18■■□□□ 1.3
SLC6A4-202ENST00000394821 CC2D1BQ5T0F9 858 aaKnown RBP23.18■■□□□ 1.3
SLC6A4-202ENST00000394821 AMOTL2Q9Y2J4 779 aa23.18■■□□□ 1.3
SLC6A4-202ENST00000394821 CPS1P31327 1500 aa23.18■■□□□ 1.3
SLC6A4-202ENST00000394821 HNRNPUQ00839 825 aaKnown RBP eCLIP23.17■■□□□ 1.3
SLC6A4-202ENST00000394821 CARD14Q9BXL6 1004 aa23.17■■□□□ 1.3
SLC6A4-202ENST00000394821 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
SLC6A4-202ENST00000394821 HSPA2P54652 639 aa23.13■■□□□ 1.29
SLC6A4-202ENST00000394821 FAM9BQ8IZU0 186 aa23.13■■□□□ 1.29
SLC6A4-202ENST00000394821 FAM135BQ49AJ0 1406 aa23.13■■□□□ 1.29
SLC6A4-202ENST00000394821 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.13■■□□□ 1.29
SLC6A4-202ENST00000394821 DIP2AQ14689 1571 aa23.12■■□□□ 1.29
SLC6A4-202ENST00000394821 SIRT1Q96EB6 747 aa23.11■■□□□ 1.29
SLC6A4-202ENST00000394821 KCNA6P17658 529 aa23.11■■□□□ 1.29
SLC6A4-202ENST00000394821 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
SLC6A4-202ENST00000394821 KNSTRNQ9Y448 316 aa23.11■■□□□ 1.29
SLC6A4-202ENST00000394821 SUPT16HQ9Y5B9 1047 aaKnown RBP23.1■■□□□ 1.29
SLC6A4-202ENST00000394821 NPHP4O75161 1426 aaPredicted RBP23.09■■□□□ 1.29
SLC6A4-202ENST00000394821 KTN1Q86UP2 1357 aaKnown RBP23.09■■□□□ 1.29
SLC6A4-202ENST00000394821 XRN1Q8IZH2 1706 aaKnown RBP23.09■■□□□ 1.29
SLC6A4-202ENST00000394821 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
SLC6A4-202ENST00000394821 RBM33Q96EV2 1170 aaKnown RBP23.08■■□□□ 1.29
SLC6A4-202ENST00000394821 PUS7Q96PZ0 661 aaKnown RBP23.08■■□□□ 1.29
SLC6A4-202ENST00000394821 PARD3Q8TEW0 1356 aa23.07■■□□□ 1.28
SLC6A4-202ENST00000394821 CHD2O14647 1828 aaKnown RBP23.05■■□□□ 1.28
SLC6A4-202ENST00000394821 NUTM2FA1L443 756 aa23.05■■□□□ 1.28
SLC6A4-202ENST00000394821 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
SLC6A4-202ENST00000394821 NSD3Q9BZ95 1437 aa23.05■■□□□ 1.28
SLC6A4-202ENST00000394821 RALBP1Q15311 655 aa23.04■■□□□ 1.28
SLC6A4-202ENST00000394821 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
SLC6A4-202ENST00000394821 CD163L1Q9NR16 1453 aa23.03■■□□□ 1.28
SLC6A4-202ENST00000394821 A0A1W2PP64 1363 aa23.03■■□□□ 1.28
SLC6A4-202ENST00000394821 PTCH1Q13635 1447 aa23.03■■□□□ 1.28
SLC6A4-202ENST00000394821 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
SLC6A4-202ENST00000394821 ANKRD36BQ8N2N9 1353 aa23.01■■□□□ 1.27
SLC6A4-202ENST00000394821 MYBBP1AQ9BQG0 1328 aaKnown RBP23.01■■□□□ 1.27
SLC6A4-202ENST00000394821 LMTK3Q96Q04 1460 aa23.01■■□□□ 1.27
SLC6A4-202ENST00000394821 PIK3R4Q99570 1358 aa23.01■■□□□ 1.27
SLC6A4-202ENST00000394821 NUDT16Q96DE0 195 aaKnown RBP23■■□□□ 1.27
SLC6A4-202ENST00000394821 PNISRQ8TF01 805 aaKnown RBP22.99■■□□□ 1.27
SLC6A4-202ENST00000394821 ADGRB2O60241 1585 aa22.98■■□□□ 1.27
SLC6A4-202ENST00000394821 ZBED9Q6R2W3 1325 aa22.96■■□□□ 1.27
SLC6A4-202ENST00000394821 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
SLC6A4-202ENST00000394821 BRD4O60885 1362 aaPredicted RBP22.96■■□□□ 1.27
SLC6A4-202ENST00000394821 ATP7BP35670 1465 aa22.96■■□□□ 1.27
SLC6A4-202ENST00000394821 NPC1L1Q9UHC9 1359 aa22.94■■□□□ 1.26
SLC6A4-202ENST00000394821 NINLQ9Y2I6 1382 aa22.94■■□□□ 1.26
SLC6A4-202ENST00000394821 PPP2R1AP30153 589 aa22.93■■□□□ 1.26
SLC6A4-202ENST00000394821 RGPD8O14715 1765 aaPredicted RBP22.93■■□□□ 1.26
SLC6A4-202ENST00000394821 NLRP13Q86W25 1043 aa22.93■■□□□ 1.26
SLC6A4-202ENST00000394821 CCDC61Q9Y6R9 512 aa22.93■■□□□ 1.26
SLC6A4-202ENST00000394821 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
SLC6A4-202ENST00000394821 FKBP8Q14318 412 aa22.92■■□□□ 1.26
SLC6A4-202ENST00000394821 TERF2IPQ9NYB0 399 aa22.92■■□□□ 1.26
SLC6A4-202ENST00000394821 STRCQ7RTU9 1775 aa22.92■■□□□ 1.26
SLC6A4-202ENST00000394821 NALCNQ8IZF0 1738 aa22.92■■□□□ 1.26
SLC6A4-202ENST00000394821 TNNT2P45379 298 aaPredicted RBP22.91■■□□□ 1.26
SLC6A4-202ENST00000394821 SENP3-EIF4A1A0A087X0R7 540 aa22.89■■□□□ 1.26
SLC6A4-202ENST00000394821 HDGFL2Q7Z4V5 671 aaPredicted RBP22.89■■□□□ 1.26
SLC6A4-202ENST00000394821 CGNL1Q0VF96 1302 aa22.89■■□□□ 1.25
SLC6A4-202ENST00000394821 STRCP1A6NGW2 1772 aa22.89■■□□□ 1.25
SLC6A4-202ENST00000394821 GGNBP2Q9H3C7 697 aa22.89■■□□□ 1.25
SLC6A4-202ENST00000394821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.88■■□□□ 1.25
SLC6A4-202ENST00000394821 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
SLC6A4-202ENST00000394821 NKTRP30414 1462 aaKnown RBP22.87■■□□□ 1.25
SLC6A4-202ENST00000394821 TOPAZ1Q8N9V7 1692 aa22.87■■□□□ 1.25
SLC6A4-202ENST00000394821 NWD1Q149M9 1564 aa22.86■■□□□ 1.25
SLC6A4-202ENST00000394821 FYB1O15117 783 aa22.86■■□□□ 1.25
SLC6A4-202ENST00000394821 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
SLC6A4-202ENST00000394821 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
SLC6A4-202ENST00000394821 CDC42BPGQ6DT37 1551 aa22.85■■□□□ 1.25
SLC6A4-202ENST00000394821 ACEP12821 1306 aa22.83■■□□□ 1.25
SLC6A4-202ENST00000394821 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.25
SLC6A4-202ENST00000394821 AKAP12Q02952 1782 aa22.83■■□□□ 1.25
SLC6A4-202ENST00000394821 PROSER2Q86WR7 435 aaPredicted RBP22.83■■□□□ 1.24
SLC6A4-202ENST00000394821 FMN2Q9NZ56 1722 aa22.83■■□□□ 1.24
SLC6A4-202ENST00000394821 ITSN1Q15811 1721 aa22.82■■□□□ 1.24
SLC6A4-202ENST00000394821 NEFLP07196 543 aa22.82■■□□□ 1.24
SLC6A4-202ENST00000394821 MON2Q7Z3U7 1717 aa22.81■■□□□ 1.24
SLC6A4-202ENST00000394821 C14orf37Q86TY3 774 aa22.81■■□□□ 1.24
SLC6A4-202ENST00000394821 PLEKHG3A1L390 1219 aa22.8■■□□□ 1.24
SLC6A4-202ENST00000394821 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
SLC6A4-202ENST00000394821 KIF20BQ96Q89 1820 aa22.8■■□□□ 1.24
SLC6A4-202ENST00000394821 FBLN1P23142 703 aa22.8■■□□□ 1.24
SLC6A4-202ENST00000394821 NME9Q86XW9 330 aa22.8■■□□□ 1.24
SLC6A4-202ENST00000394821 EDC4Q6P2E9 1401 aaKnown RBP22.77■■□□□ 1.24
SLC6A4-202ENST00000394821 NSD2O96028 1365 aa22.76■■□□□ 1.23
SLC6A4-202ENST00000394821 ANKRD26Q9UPS8 1709 aa22.76■■□□□ 1.23
SLC6A4-202ENST00000394821 TMEM94Q12767 1356 aa22.74■■□□□ 1.23
SLC6A4-202ENST00000394821 MTHFSP49914 203 aa22.74■■□□□ 1.23
SLC6A4-202ENST00000394821 ZNF692Q9BU19 519 aaPredicted RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms