RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 SHPRHQ149N8 1683 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 QRICH2Q9H0J4 1663 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 CCDC27Q2M243 656 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 WWC1Q8IX03 1113 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 MROH2AA6NES4 1674 aa12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 PPRC1Q5VV67 1664 aaKnown RBP12.89□□□□□ -0.35
UBE2D3-208ENST00000394803 BCAR3O75815 825 aa12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 CT47B1P0C2W7 299 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 IQSEC2Q5JU85 1478 aa12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 ZNF518AQ6AHZ1 1483 aa12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 MYH16Q9H6N6 1097 aa12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 PPLO60437 1756 aa12.88□□□□□ -0.35
UBE2D3-208ENST00000394803 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
UBE2D3-208ENST00000394803 CARD14Q9BXL6 1004 aa12.87□□□□□ -0.35
UBE2D3-208ENST00000394803 ADGRF5Q8IZF2 1346 aa12.87□□□□□ -0.35
UBE2D3-208ENST00000394803 SKAP1Q86WV1 359 aa12.86□□□□□ -0.35
UBE2D3-208ENST00000394803 SPINK5Q9NQ38 1064 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-208ENST00000394803 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
UBE2D3-208ENST00000394803 RWDD1Q9H446 243 aaPredicted RBP12.85□□□□□ -0.35
UBE2D3-208ENST00000394803 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
UBE2D3-208ENST00000394803 NOS1P29475 1434 aa12.84□□□□□ -0.35
UBE2D3-208ENST00000394803 PHF23Q9BUL5 403 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-208ENST00000394803 C14orf93Q9H972 538 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-208ENST00000394803 IGHDP01880 384 aa12.83□□□□□ -0.36
UBE2D3-208ENST00000394803 RARSP54136 660 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-208ENST00000394803 SLC4A3P48751 1232 aa12.82□□□□□ -0.36
UBE2D3-208ENST00000394803 COG6Q9Y2V7 657 aa12.82□□□□□ -0.36
UBE2D3-208ENST00000394803 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
UBE2D3-208ENST00000394803 TCP11L2Q8N4U5 519 aa12.82□□□□□ -0.36
UBE2D3-208ENST00000394803 ADGRB1O14514 1584 aa12.82□□□□□ -0.36
UBE2D3-208ENST00000394803 FRAT1Q92837 279 aaPredicted RBP12.81□□□□□ -0.36
UBE2D3-208ENST00000394803 ANKRD36BQ8N2N9 1353 aa12.81□□□□□ -0.36
UBE2D3-208ENST00000394803 ADGRB2O60241 1585 aa12.81□□□□□ -0.36
UBE2D3-208ENST00000394803 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
UBE2D3-208ENST00000394803 HECW2Q9P2P5 1572 aa12.8□□□□□ -0.36
UBE2D3-208ENST00000394803 PANK1Q8TE04 598 aa12.8□□□□□ -0.36
UBE2D3-208ENST00000394803 MLH3Q9UHC1 1453 aa12.79□□□□□ -0.36
UBE2D3-208ENST00000394803 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-208ENST00000394803 GLI2P10070 1586 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 ABCC11Q96J66 1382 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 L1TD1Q5T7N2 865 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 DNAJC5Q9H3Z4 198 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 USP19O94966 1318 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 FRAT2O75474 233 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 ZKSCAN2Q63HK3 967 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 DMRT2Q9Y5R5 561 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 NPATQ14207 1427 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 ASXL2Q76L83 1435 aa12.78□□□□□ -0.36
UBE2D3-208ENST00000394803 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.36
UBE2D3-208ENST00000394803 CHGAP10645 457 aaKnown RBP12.77□□□□□ -0.36
UBE2D3-208ENST00000394803 FTSJ3Q8IY81 847 aaKnown RBP12.77□□□□□ -0.36
UBE2D3-208ENST00000394803 TRAK1Q9UPV9 953 aa12.77□□□□□ -0.36
UBE2D3-208ENST00000394803 ARHGEF28Q8N1W1 1705 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 NLRP1Q9C000 1473 aa12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 MTHFSP49914 203 aa12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 MVPQ14764 893 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 TBC1D32Q96NH3 1257 aa12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 IL16Q14005 1332 aa12.77□□□□□ -0.37
UBE2D3-208ENST00000394803 POGZQ7Z3K3 1410 aa12.76□□□□□ -0.37
UBE2D3-208ENST00000394803 CAMSAP1Q5T5Y3 1602 aa12.76□□□□□ -0.37
UBE2D3-208ENST00000394803 NEUROD2Q15784 382 aa12.76□□□□□ -0.37
UBE2D3-208ENST00000394803 SLC12A5Q9H2X9 1139 aa12.76□□□□□ -0.37
UBE2D3-208ENST00000394803 PIK3C2BO00750 1634 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 DZIP1LQ8IYY4 767 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 DDX19BQ9UMR2 479 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 PDZRN3Q9UPQ7 1066 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 MED14O60244 1454 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 ANKRD26Q9UPS8 1709 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 ABCC3O15438 1527 aa12.75□□□□□ -0.37
UBE2D3-208ENST00000394803 NPM1P06748 294 aaKnown RBP eCLIP12.74□□□□□ -0.37
UBE2D3-208ENST00000394803 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-208ENST00000394803 ZFYVE9O95405 1425 aa12.74□□□□□ -0.37
UBE2D3-208ENST00000394803 U2AF1L5P0DN76 240 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-208ENST00000394803 U2AF1Q01081 240 aaKnown RBP eCLIP12.74□□□□□ -0.372e-12■□□□□ 11.1
UBE2D3-208ENST00000394803 FAM43AQ8N2R8 423 aa12.74□□□□□ -0.37
UBE2D3-208ENST00000394803 TULP4Q9NRJ4 1543 aa12.73□□□□□ -0.37
UBE2D3-208ENST00000394803 HDAC1Q13547 482 aaPredicted RBP12.73□□□□□ -0.37
UBE2D3-208ENST00000394803 RRP7AQ9Y3A4 280 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-208ENST00000394803 PCDHB15Q9Y5E8 787 aa12.73□□□□□ -0.37
UBE2D3-208ENST00000394803 ATAD2Q6PL18 1390 aa12.73□□□□□ -0.37
UBE2D3-208ENST00000394803 IPO8O15397 1037 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 EIF5BO60841 1220 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 TNNT2P45379 298 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 BRPF3Q9ULD4 1205 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 ARHGAP31Q2M1Z3 1444 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 FRMPD1Q5SYB0 1578 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 ZNF428Q96B54 188 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 KIF16BQ96L93 1317 aa12.72□□□□□ -0.37
UBE2D3-208ENST00000394803 TERF2IPQ9NYB0 399 aa12.71□□□□□ -0.37
UBE2D3-208ENST00000394803 SMC4Q9NTJ3 1288 aa12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 SEC24BO95487 1268 aa12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 RLBP1P12271 317 aa12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 ANTXR1Q9H6X2 564 aa12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 RTN4Q9NQC3 1192 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 CLTCQ00610 1675 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-208ENST00000394803 CD109Q6YHK3 1445 aa12.69□□□□□ -0.38
UBE2D3-208ENST00000394803 NEO1Q92859 1461 aa12.69□□□□□ -0.38
UBE2D3-208ENST00000394803 ATF7IPQ6VMQ6 1270 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms