RNA–Protein interactions for RNA: ENST00000394609.6

RTN4-205, Transcript of reticulon 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN4, Length 1,898 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-205ENST00000394609 WASHC2CQ9Y4E1 1318 aa9.77□□□□□ -0.85
RTN4-205ENST00000394609 ABCA6Q8N139 1617 aa9.76□□□□□ -0.85
RTN4-205ENST00000394609 NLRP6P59044 892 aa9.76□□□□□ -0.85
RTN4-205ENST00000394609 EIF4G2P78344 907 aaKnown RBP eCLIP9.76□□□□□ -0.853e-6■□□□□ 9.7
RTN4-205ENST00000394609 COL17A1Q9UMD9 1497 aaPredicted RBP9.76□□□□□ -0.85
RTN4-205ENST00000394609 DEPDC5O75140 1603 aa9.75□□□□□ -0.85
RTN4-205ENST00000394609 PPRC1Q5VV67 1664 aaKnown RBP9.75□□□□□ -0.85
RTN4-205ENST00000394609 DDX10Q13206 875 aaKnown RBP9.75□□□□□ -0.85
RTN4-205ENST00000394609 ZSWIM6Q9HCJ5 1215 aa9.75□□□□□ -0.85
RTN4-205ENST00000394609 RICTORQ6R327 1708 aa9.75□□□□□ -0.85
RTN4-205ENST00000394609 MROH1Q8NDA8 1641 aa9.75□□□□□ -0.85
RTN4-205ENST00000394609 ATP10AO60312 1499 aa9.75□□□□□ -0.85
RTN4-205ENST00000394609 PRDM15P57071 1507 aaPredicted RBP9.74□□□□□ -0.85
RTN4-205ENST00000394609 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
RTN4-205ENST00000394609 DIP2CQ9Y2E4 1556 aa9.74□□□□□ -0.85
RTN4-205ENST00000394609 EIF2AK4Q9P2K8 1649 aaKnown RBP9.74□□□□□ -0.85
RTN4-205ENST00000394609 PHF8Q9UPP1 1060 aa9.74□□□□□ -0.85
RTN4-205ENST00000394609 PTPRTO14522 1441 aa9.73□□□□□ -0.85
RTN4-205ENST00000394609 E9PCH4 1651 aa9.73□□□□□ -0.85
RTN4-205ENST00000394609 MS4A4AQ96JQ5 239 aa9.72□□□□□ -0.85
RTN4-205ENST00000394609 KIF13AQ9H1H9 1805 aa9.72□□□□□ -0.85
RTN4-205ENST00000394609 ERBB3P21860 1342 aa9.72□□□□□ -0.85
RTN4-205ENST00000394609 POTEB3A0JP26 581 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 TET3O43151 1660 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 MLECQ14165 292 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 UHRF1BP1Q6BDS2 1440 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 POTEBQ6S5H4 581 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 CARD11Q9BXL7 1154 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 DNAJC5Q9H3Z4 198 aa9.71□□□□□ -0.85
RTN4-205ENST00000394609 ZMYM4Q5VZL5 1548 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 NPATQ14207 1427 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 KRTAP3-2Q9BYR7 98 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 BCL11BQ9C0K0 894 aaPredicted RBP9.7□□□□□ -0.86
RTN4-205ENST00000394609 RNF17Q9BXT8 1623 aaKnown RBP9.7□□□□□ -0.86
RTN4-205ENST00000394609 TRPM2O94759 1503 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 SPATA31E1Q6ZUB1 1445 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 C11orf95C9JLR9 678 aaPredicted RBP9.7□□□□□ -0.86
RTN4-205ENST00000394609 CHGAP10645 457 aaKnown RBP9.7□□□□□ -0.86
RTN4-205ENST00000394609 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
RTN4-205ENST00000394609 EFCAB6Q5THR3 1501 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 LMTK2Q8IWU2 1503 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 WASHC2AQ641Q2 1341 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 STK24Q9Y6E0 443 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 UGGT1Q9NYU2 1555 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 ABCC3O15438 1527 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 PRAG1Q86YV5 1406 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 USP47Q96K76 1375 aa9.69□□□□□ -0.86
RTN4-205ENST00000394609 ECM2O94769 699 aaPredicted RBP9.68□□□□□ -0.86
RTN4-205ENST00000394609 ROCK2O75116 1388 aaKnown RBP9.68□□□□□ -0.86
RTN4-205ENST00000394609 TMEM92Q6UXU6 159 aa9.68□□□□□ -0.86
RTN4-205ENST00000394609 CLTCL1P53675 1640 aa9.67□□□□□ -0.86
RTN4-205ENST00000394609 RALGAPBQ86X10 1494 aa9.67□□□□□ -0.86
RTN4-205ENST00000394609 CEP152O94986 1710 aa9.67□□□□□ -0.86
RTN4-205ENST00000394609 ARID4BQ4LE39 1312 aaPredicted RBP9.66□□□□□ -0.86
RTN4-205ENST00000394609 FBXO31Q5XUX0 539 aaPredicted RBP9.66□□□□□ -0.86
RTN4-205ENST00000394609 SPHKAPQ2M3C7 1700 aa9.66□□□□□ -0.86
RTN4-205ENST00000394609 ST20-MTHFSA0A0A6YYL1 179 aa9.66□□□□□ -0.86
RTN4-205ENST00000394609 BCORL1Q5H9F3 1711 aa9.66□□□□□ -0.86
RTN4-205ENST00000394609 STK25O00506 426 aa9.65□□□□□ -0.86
RTN4-205ENST00000394609 AMER1Q5JTC6 1135 aaPredicted RBP9.65□□□□□ -0.86
RTN4-205ENST00000394609 FBXO22Q8NEZ5 403 aa9.65□□□□□ -0.86
RTN4-205ENST00000394609 POLR3GLQ9BT43 218 aa9.65□□□□□ -0.86
RTN4-205ENST00000394609 CNTLNQ9NXG0 1405 aa9.64□□□□□ -0.87
RTN4-205ENST00000394609 IDI1Q13907 227 aa9.64□□□□□ -0.87
RTN4-205ENST00000394609 CCDC7Q96M83 1385 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 KIF7Q2M1P5 1343 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 ADGRF5Q8IZF2 1346 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 NOS1P29475 1434 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 NUTM2DQ5VT03 806 aaPredicted RBP9.63□□□□□ -0.87
RTN4-205ENST00000394609 YTHDC1Q96MU7 727 aaKnown RBP9.63□□□□□ -0.87
RTN4-205ENST00000394609 ARHGAP31Q2M1Z3 1444 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 AGLP35573 1532 aa9.63□□□□□ -0.87
RTN4-205ENST00000394609 CFAP65Q6ZU64 1925 aaKnown RBP9.62□□□□□ -0.87
RTN4-205ENST00000394609 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
RTN4-205ENST00000394609 STAC3Q96MF2 364 aa9.62□□□□□ -0.87
RTN4-205ENST00000394609 ESF1Q9H501 851 aaKnown RBP9.62□□□□□ -0.87
RTN4-205ENST00000394609 CAMSAP1Q5T5Y3 1602 aa9.62□□□□□ -0.87
RTN4-205ENST00000394609 CFAP70Q5T0N1 1121 aa9.62□□□□□ -0.87
RTN4-205ENST00000394609 ARHGEF40Q8TER5 1519 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 REREQ9P2R6 1566 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 SIGLEC1Q9BZZ2 1709 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 GPRASP1Q5JY77 1395 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 GPR153Q6NV75 609 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 MFRPQ9BY79 579 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 SLC52A1Q9NWF4 448 aa9.61□□□□□ -0.87
RTN4-205ENST00000394609 ANP32CO43423 234 aa9.6□□□□□ -0.87
RTN4-205ENST00000394609 ZNF687Q8N1G0 1237 aa9.59□□□□□ -0.87
RTN4-205ENST00000394609 TRPM1Q7Z4N2 1603 aa9.59□□□□□ -0.87
RTN4-205ENST00000394609 SYNMO15061 1565 aa9.59□□□□□ -0.87
RTN4-205ENST00000394609 ADGRB3O60242 1522 aa9.58□□□□□ -0.88
RTN4-205ENST00000394609 ZMYM3Q14202 1370 aa9.58□□□□□ -0.88
RTN4-205ENST00000394609 ZC3H13Q5T200 1668 aaKnown RBP9.58□□□□□ -0.88
RTN4-205ENST00000394609 RPGRIP1LQ68CZ1 1315 aa9.57□□□□□ -0.88
RTN4-205ENST00000394609 ERVK-7P63135 1459 aa9.57□□□□□ -0.88
RTN4-205ENST00000394609 TESK2Q96S53 571 aa9.57□□□□□ -0.88
RTN4-205ENST00000394609 RTN4Q9NQC3 1192 aaKnown RBP9.57□□□□□ -0.88
RTN4-205ENST00000394609 NEURL4Q96JN8 1562 aa9.57□□□□□ -0.88
RTN4-205ENST00000394609 MADDQ8WXG6 1647 aa9.57□□□□□ -0.88
RTN4-205ENST00000394609 CNGB1Q14028 1251 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms