RNA–Protein interactions for RNA: ENST00000394348.2

MITF-205, Transcript of melanogenesis associated transcription factor, human

TSL 1 (best) BASIC

Gene MITF, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MITF-205	ENST00000394348	USP32	Q8NFA0	1604 aa		12.47	□□□□□ -0.41
MITF-205	ENST00000394348	ERICH6B	Q5W0A0	696 aa		12.46	□□□□□ -0.41
MITF-205	ENST00000394348	SMG6	Q86US8	1419 aa	Known RBP	12.45	□□□□□ -0.42
MITF-205	ENST00000394348	AKT1S1	Q96B36	256 aa		12.45	□□□□□ -0.42
MITF-205	ENST00000394348	KNSTRN	Q9Y448	316 aa		12.45	□□□□□ -0.42
MITF-205	ENST00000394348	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.44	□□□□□ -0.42
MITF-205	ENST00000394348	BLM	P54132	1417 aa	Predicted RBP	12.43	□□□□□ -0.42
MITF-205	ENST00000394348	NINL	Q9Y2I6	1382 aa		12.43	□□□□□ -0.42
MITF-205	ENST00000394348	A2ML1	A8K2U0	1454 aa		12.42	□□□□□ -0.42
MITF-205	ENST00000394348	ZNF692	Q9BU19	519 aa	Predicted RBP	12.42	□□□□□ -0.42
MITF-205	ENST00000394348	DLC1	Q96QB1	1528 aa		12.42	□□□□□ -0.42
MITF-205	ENST00000394348	ALK	Q9UM73	1620 aa		12.4	□□□□□ -0.42
MITF-205	ENST00000394348	FKBP8	Q14318	412 aa		12.4	□□□□□ -0.42
MITF-205	ENST00000394348	TULP4	Q9NRJ4	1543 aa		12.4	□□□□□ -0.42
MITF-205	ENST00000394348	PDE3B	Q13370	1112 aa		12.39	□□□□□ -0.43
MITF-205	ENST00000394348	SETD1A	O15047	1707 aa	Known RBP	12.39	□□□□□ -0.43
MITF-205	ENST00000394348	PTPRM	P28827	1452 aa		12.39	□□□□□ -0.43
MITF-205	ENST00000394348	EVC2	Q86UK5	1308 aa		12.38	□□□□□ -0.43
MITF-205	ENST00000394348	CC2D1B	Q5T0F9	858 aa	Known RBP	12.38	□□□□□ -0.43
MITF-205	ENST00000394348	TRAK1	Q9UPV9	953 aa		12.38	□□□□□ -0.43
MITF-205	ENST00000394348	NUDC	Q9Y266	331 aa		12.38	□□□□□ -0.43
MITF-205	ENST00000394348	NSD2	O96028	1365 aa		12.38	□□□□□ -0.43
MITF-205	ENST00000394348	YTHDC2	Q9H6S0	1430 aa	Known RBP	12.37	□□□□□ -0.43
MITF-205	ENST00000394348	RIMS2	Q9UQ26	1411 aa		12.37	□□□□□ -0.43
MITF-205	ENST00000394348	PPP2R1A	P30153	589 aa		12.37	□□□□□ -0.43
MITF-205	ENST00000394348	SSUH2	Q9Y2M2	353 aa		12.37	□□□□□ -0.43
MITF-205	ENST00000394348	ZMYM3	Q14202	1370 aa		12.37	□□□□□ -0.43
MITF-205	ENST00000394348	FBXO31	Q5XUX0	539 aa	Predicted RBP	12.36	□□□□□ -0.43
MITF-205	ENST00000394348	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	12.36	□□□□□ -0.43
MITF-205	ENST00000394348	KNDC1	Q76NI1	1749 aa		12.36	□□□□□ -0.43
MITF-205	ENST00000394348	ATAD2	Q6PL18	1390 aa		12.35	□□□□□ -0.43
MITF-205	ENST00000394348	ANKRD36B	Q8N2N9	1353 aa		12.35	□□□□□ -0.43
MITF-205	ENST00000394348	REM2	Q8IYK8	340 aa	Predicted RBP	12.35	□□□□□ -0.43
MITF-205	ENST00000394348	ESF1	Q9H501	851 aa	Known RBP	12.35	□□□□□ -0.43
MITF-205	ENST00000394348	RNF123	Q5XPI4	1314 aa		12.35	□□□□□ -0.43
MITF-205	ENST00000394348	NLRP1	Q9C000	1473 aa		12.34	□□□□□ -0.43
MITF-205	ENST00000394348	TNR	Q92752	1358 aa		12.34	□□□□□ -0.43
MITF-205	ENST00000394348	CNGB1	Q14028	1251 aa	Predicted RBP	12.34	□□□□□ -0.43
MITF-205	ENST00000394348	TMEM132E	Q6IEE7	984 aa		12.34	□□□□□ -0.43
MITF-205	ENST00000394348	STAG3	Q9UJ98	1225 aa		12.34	□□□□□ -0.43
MITF-205	ENST00000394348	NRXN3	Q9Y4C0	1643 aa		12.33	□□□□□ -0.43
MITF-205	ENST00000394348	HDGF	P51858	240 aa	Known RBP	12.33	□□□□□ -0.44
MITF-205	ENST00000394348	NSD3	Q9BZ95	1437 aa		12.33	□□□□□ -0.44
MITF-205	ENST00000394348	UBR1	Q8IWV7	1749 aa		12.33	□□□□□ -0.44
MITF-205	ENST00000394348	POLR3A	O14802	1390 aa	Predicted RBP	12.32	□□□□□ -0.44
MITF-205	ENST00000394348	ABCC11	Q96J66	1382 aa		12.32	□□□□□ -0.44
MITF-205	ENST00000394348	TECPR2	O15040	1411 aa		12.32	□□□□□ -0.44
MITF-205	ENST00000394348	NGEF	Q8N5V2	710 aa		12.32	□□□□□ -0.44
MITF-205	ENST00000394348	CARD14	Q9BXL6	1004 aa		12.32	□□□□□ -0.44
MITF-205	ENST00000394348	SPDYE4	A6NLX3	237 aa		12.31	□□□□□ -0.44
MITF-205	ENST00000394348	MED14	O60244	1454 aa		12.31	□□□□□ -0.44
MITF-205	ENST00000394348	CGNL1	Q0VF96	1302 aa		12.31	□□□□□ -0.44
MITF-205	ENST00000394348	SIRT1	Q96EB6	747 aa		12.3	□□□□□ -0.44
MITF-205	ENST00000394348	ANKRD26	Q9UPS8	1709 aa		12.3	□□□□□ -0.44
MITF-205	ENST00000394348	CPS1	P31327	1500 aa		12.3	□□□□□ -0.44
MITF-205	ENST00000394348	FAM135B	Q49AJ0	1406 aa		12.29	□□□□□ -0.44
MITF-205	ENST00000394348	WDR43	Q15061	677 aa	Known RBP eCLIP	12.29	□□□□□ -0.44
MITF-205	ENST00000394348	MLEC	Q14165	292 aa		12.28	□□□□□ -0.44
MITF-205	ENST00000394348	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.28	□□□□□ -0.44
MITF-205	ENST00000394348	TMEM2	Q9UHN6	1383 aa		12.28	□□□□□ -0.44
MITF-205	ENST00000394348	ATP7B	P35670	1465 aa		12.27	□□□□□ -0.44
MITF-205	ENST00000394348	PPP4R2	Q9NY27	417 aa		12.27	□□□□□ -0.45
MITF-205	ENST00000394348	FER1L4	A9Z1Z3	1794 aa		12.27	□□□□□ -0.45
MITF-205	ENST00000394348	SLIT1	O75093	1534 aa		12.27	□□□□□ -0.45
MITF-205	ENST00000394348	C3	P01024	1663 aa		12.26	□□□□□ -0.45
MITF-205	ENST00000394348	PRAM1	Q96QH2	718 aa		12.26	□□□□□ -0.45
MITF-205	ENST00000394348	SLC12A5	Q9H2X9	1139 aa		12.26	□□□□□ -0.45
MITF-205	ENST00000394348	POGK	Q9P215	609 aa		12.26	□□□□□ -0.45
MITF-205	ENST00000394348	SHPRH	Q149N8	1683 aa		12.26	□□□□□ -0.45
MITF-205	ENST00000394348	ADAMTS8	Q9UP79	889 aa		12.25	□□□□□ -0.45
MITF-205	ENST00000394348	PLEKHG1	Q9ULL1	1385 aa		12.25	□□□□□ -0.45
MITF-205	ENST00000394348	ARHGAP23	Q9P227	1491 aa		12.25	□□□□□ -0.45
MITF-205	ENST00000394348	ADGRB2	O60241	1585 aa		12.25	□□□□□ -0.45
MITF-205	ENST00000394348		A0A1W2PP64	1363 aa		12.24	□□□□□ -0.45
MITF-205	ENST00000394348	DIP2A	Q14689	1571 aa		12.24	□□□□□ -0.45
MITF-205	ENST00000394348	MORC1	Q86VD1	984 aa		12.24	□□□□□ -0.45
MITF-205	ENST00000394348	CD163L1	Q9NR16	1453 aa		12.24	□□□□□ -0.45
MITF-205	ENST00000394348	TERF2IP	Q9NYB0	399 aa		12.24	□□□□□ -0.45
MITF-205	ENST00000394348	ZNF521	Q96K83	1311 aa		12.23	□□□□□ -0.45
MITF-205	ENST00000394348	STK26	Q9P289	416 aa		12.23	□□□□□ -0.45
MITF-205	ENST00000394348	KIF20B	Q96Q89	1820 aa		12.23	□□□□□ -0.45
MITF-205	ENST00000394348	PITPNM1	O00562	1244 aa		12.22	□□□□□ -0.45
MITF-205	ENST00000394348	SRPK2	P78362	688 aa	Known RBP	12.22	□□□□□ -0.45
MITF-205	ENST00000394348	CHRDL2	Q6WN34	429 aa		12.22	□□□□□ -0.45
MITF-205	ENST00000394348	BCAN	Q96GW7	911 aa		12.22	□□□□□ -0.45
MITF-205	ENST00000394348	CABP2	Q9NPB3	220 aa		12.22	□□□□□ -0.45
MITF-205	ENST00000394348	ADAMTS13	Q76LX8	1427 aa		12.21	□□□□□ -0.45
MITF-205	ENST00000394348	CFAP53	Q96M91	514 aa		12.21	□□□□□ -0.45
MITF-205	ENST00000394348	MET	P08581	1390 aa		12.2	□□□□□ -0.46
MITF-205	ENST00000394348	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.2	□□□□□ -0.46
MITF-205	ENST00000394348	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	12.2	□□□□□ -0.46
MITF-205	ENST00000394348	CDC42BPG	Q6DT37	1551 aa		12.19	□□□□□ -0.46
MITF-205	ENST00000394348	CDK19	Q9BWU1	502 aa		12.19	□□□□□ -0.46
MITF-205	ENST00000394348	RCAN3	Q9UKA8	241 aa		12.19	□□□□□ -0.46
MITF-205	ENST00000394348	IQSEC2	Q5JU85	1478 aa		12.19	□□□□□ -0.46
MITF-205	ENST00000394348	PLEKHH1	Q9ULM0	1364 aa		12.18	□□□□□ -0.46
MITF-205	ENST00000394348	RRP1	P56182	461 aa	Known RBP	12.18	□□□□□ -0.46
MITF-205	ENST00000394348	MON2	Q7Z3U7	1717 aa		12.17	□□□□□ -0.46
MITF-205	ENST00000394348	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.17	□□□□□ -0.46
MITF-205	ENST00000394348	SPDYE1	Q8NFV5	336 aa	Predicted RBP	12.17	□□□□□ -0.46

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms