RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 ERICH6BQ5W0A0 696 aa20.06■□□□□ 0.8
GPC3-202ENST00000394299 MORC1Q86VD1 984 aa20.06■□□□□ 0.8
GPC3-202ENST00000394299 YTHDC2Q9H6S0 1430 aaKnown RBP20.06■□□□□ 0.8
GPC3-202ENST00000394299 WAPLQ7Z5K2 1190 aa20.05■□□□□ 0.8
GPC3-202ENST00000394299 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
GPC3-202ENST00000394299 PLEKHH1Q9ULM0 1364 aa20.04■□□□□ 0.8
GPC3-202ENST00000394299 PDE3BQ13370 1112 aa20.03■□□□□ 0.8
GPC3-202ENST00000394299 RIMS2Q9UQ26 1411 aa20.03■□□□□ 0.8
GPC3-202ENST00000394299 SPATA31D1Q6ZQQ2 1576 aa20.03■□□□□ 0.8
GPC3-202ENST00000394299 PTPRMP28827 1452 aa20.03■□□□□ 0.8
GPC3-202ENST00000394299 RCAN3Q9UKA8 241 aa20.03■□□□□ 0.8
GPC3-202ENST00000394299 PLPPR3Q6T4P5 718 aa20.02■□□□□ 0.8
GPC3-202ENST00000394299 INSRP06213 1382 aa20.02■□□□□ 0.79
GPC3-202ENST00000394299 CEBPAP49715 358 aaPredicted RBP20.01■□□□□ 0.79
GPC3-202ENST00000394299 APAF1O14727 1248 aa20■□□□□ 0.79
GPC3-202ENST00000394299 CDK19Q9BWU1 502 aa19.99■□□□□ 0.79
GPC3-202ENST00000394299 CGNL1Q0VF96 1302 aa19.99■□□□□ 0.79
GPC3-202ENST00000394299 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
GPC3-202ENST00000394299 ANKRD36BQ8N2N9 1353 aa19.98■□□□□ 0.79
GPC3-202ENST00000394299 RRP1P56182 461 aaKnown RBP19.98■□□□□ 0.79
GPC3-202ENST00000394299 MTHFSP49914 203 aa19.98■□□□□ 0.79
GPC3-202ENST00000394299 PLIN1O60240 522 aa19.97■□□□□ 0.79
GPC3-202ENST00000394299 A0A1W2PP64 1363 aa19.97■□□□□ 0.79
GPC3-202ENST00000394299 GGNBP2Q9H3C7 697 aa19.96■□□□□ 0.79
GPC3-202ENST00000394299 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
GPC3-202ENST00000394299 CABP1Q9NZU7 370 aa19.95■□□□□ 0.78
GPC3-202ENST00000394299 METP08581 1390 aa19.95■□□□□ 0.78
GPC3-202ENST00000394299 TXNDC2Q86VQ3 553 aa19.94■□□□□ 0.78
GPC3-202ENST00000394299 SPINK5Q9NQ38 1064 aaPredicted RBP19.94■□□□□ 0.78
GPC3-202ENST00000394299 ZNF521Q96K83 1311 aa19.94■□□□□ 0.78
GPC3-202ENST00000394299 TNRQ92752 1358 aa19.94■□□□□ 0.78
GPC3-202ENST00000394299 EXOC6Q8TAG9 804 aa19.93■□□□□ 0.78
GPC3-202ENST00000394299 POLR3AO14802 1390 aaPredicted RBP19.93■□□□□ 0.78
GPC3-202ENST00000394299 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
GPC3-202ENST00000394299 DMRT2Q9Y5R5 561 aa19.92■□□□□ 0.78
GPC3-202ENST00000394299 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
GPC3-202ENST00000394299 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
GPC3-202ENST00000394299 FYB1O15117 783 aa19.9■□□□□ 0.78
GPC3-202ENST00000394299 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
GPC3-202ENST00000394299 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.9■□□□□ 0.78
GPC3-202ENST00000394299 RBM19Q9Y4C8 960 aaKnown RBP19.9■□□□□ 0.78
GPC3-202ENST00000394299 ATAD2Q6PL18 1390 aa19.89■□□□□ 0.77
GPC3-202ENST00000394299 RRP7AQ9Y3A4 280 aaKnown RBP19.89■□□□□ 0.77
GPC3-202ENST00000394299 CD163L1Q9NR16 1453 aa19.89■□□□□ 0.77
GPC3-202ENST00000394299 LTKP29376 864 aa19.88■□□□□ 0.77
GPC3-202ENST00000394299 TERF2IPQ9NYB0 399 aa19.88■□□□□ 0.77
GPC3-202ENST00000394299 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
GPC3-202ENST00000394299 FBLN1P23142 703 aa19.87■□□□□ 0.77
GPC3-202ENST00000394299 SLFN5Q08AF3 891 aa19.87■□□□□ 0.77
GPC3-202ENST00000394299 ABCC11Q96J66 1382 aa19.87■□□□□ 0.77
GPC3-202ENST00000394299 NRXN3Q9Y4C0 1643 aa19.86■□□□□ 0.77
GPC3-202ENST00000394299 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.86■□□□□ 0.772e-7■■□□□ 12.6
GPC3-202ENST00000394299 TMEM2Q9UHN6 1383 aa19.85■□□□□ 0.77
GPC3-202ENST00000394299 SETD1AO15047 1707 aaKnown RBP19.85■□□□□ 0.77
GPC3-202ENST00000394299 C20orf194Q5TEA3 1177 aa19.85■□□□□ 0.77
GPC3-202ENST00000394299 HDGFL2Q7Z4V5 671 aaPredicted RBP19.84■□□□□ 0.77
GPC3-202ENST00000394299 USP32Q8NFA0 1604 aa19.84■□□□□ 0.77
GPC3-202ENST00000394299 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
GPC3-202ENST00000394299 HDGFP51858 240 aaKnown RBP19.83■□□□□ 0.77
GPC3-202ENST00000394299 CFAP53Q96M91 514 aa19.83■□□□□ 0.76
GPC3-202ENST00000394299 WASLO00401 505 aaPredicted RBP19.82■□□□□ 0.76
GPC3-202ENST00000394299 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
GPC3-202ENST00000394299 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
GPC3-202ENST00000394299 SLC26A8Q96RN1 970 aa19.82■□□□□ 0.76
GPC3-202ENST00000394299 SHPRHQ149N8 1683 aa19.82■□□□□ 0.76
GPC3-202ENST00000394299 NSD2O96028 1365 aa19.82■□□□□ 0.76
GPC3-202ENST00000394299 U2AF1L5P0DN76 240 aaPredicted RBP19.81■□□□□ 0.76
GPC3-202ENST00000394299 U2AF1Q01081 240 aaKnown RBP eCLIP19.81■□□□□ 0.764e-9■□□□□ 8.2
GPC3-202ENST00000394299 WWC1Q8IX03 1113 aa19.81■□□□□ 0.76
GPC3-202ENST00000394299 RUNDC1Q96C34 613 aa19.8■□□□□ 0.76
GPC3-202ENST00000394299 DLC1Q96QB1 1528 aa19.8■□□□□ 0.76
GPC3-202ENST00000394299 CRBNQ96SW2 442 aa19.8■□□□□ 0.76
GPC3-202ENST00000394299 NLRP1Q9C000 1473 aa19.79■□□□□ 0.76
GPC3-202ENST00000394299 NUTM2FA1L443 756 aa19.78■□□□□ 0.76
GPC3-202ENST00000394299 ZRANB1Q9UGI0 708 aa19.78■□□□□ 0.76
GPC3-202ENST00000394299 UBR1Q8IWV7 1749 aa19.78■□□□□ 0.76
GPC3-202ENST00000394299 U2SURPO15042 1029 aaKnown RBP19.78■□□□□ 0.76
GPC3-202ENST00000394299 NUDT16Q96DE0 195 aaKnown RBP19.77■□□□□ 0.76
GPC3-202ENST00000394299 ROBO2Q9HCK4 1378 aa19.77■□□□□ 0.76
GPC3-202ENST00000394299 ADAMTS13Q76LX8 1427 aa19.77■□□□□ 0.75
GPC3-202ENST00000394299 E9PSI1 815 aa19.76■□□□□ 0.75
GPC3-202ENST00000394299 PPM1GO15355 546 aaPredicted RBP19.76■□□□□ 0.75
GPC3-202ENST00000394299 BCAR3O75815 825 aa19.76■□□□□ 0.75
GPC3-202ENST00000394299 PPIP5K1Q6PFW1 1433 aa19.74■□□□□ 0.75
GPC3-202ENST00000394299 NME9Q86XW9 330 aa19.74■□□□□ 0.75
GPC3-202ENST00000394299 PRR36Q9H6K5 1346 aa19.73■□□□□ 0.75
GPC3-202ENST00000394299 CCDC61Q9Y6R9 512 aa19.71■□□□□ 0.75
GPC3-202ENST00000394299 SIRT1Q96EB6 747 aa19.71■□□□□ 0.75
GPC3-202ENST00000394299 EID1Q9Y6B2 187 aa19.71■□□□□ 0.75
GPC3-202ENST00000394299 NKTRP30414 1462 aaKnown RBP19.7■□□□□ 0.74
GPC3-202ENST00000394299 POLKQ9UBT6 870 aa19.7■□□□□ 0.74
GPC3-202ENST00000394299 FAM135BQ49AJ0 1406 aa19.7■□□□□ 0.74
GPC3-202ENST00000394299 PLEKHG1Q9ULL1 1385 aa19.7■□□□□ 0.74
GPC3-202ENST00000394299 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
GPC3-202ENST00000394299 C3P01024 1663 aa19.7■□□□□ 0.74
GPC3-202ENST00000394299 TECPR2O15040 1411 aa19.69■□□□□ 0.74
GPC3-202ENST00000394299 PTPRUQ92729 1446 aa19.69■□□□□ 0.74
GPC3-202ENST00000394299 NGEFQ8N5V2 710 aa19.69■□□□□ 0.74
GPC3-202ENST00000394299 PLEKHF1Q96S99 279 aa19.69■□□□□ 0.74
GPC3-202ENST00000394299 IQSEC2Q5JU85 1478 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms