RNA–Protein interactions for RNA: ENST00000394164.5

PSEN1-204, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 3,046 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-204ENST00000394164 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
PSEN1-204ENST00000394164 BCL2L13Q9BXK5 485 aa12.83□□□□□ -0.36
PSEN1-204ENST00000394164 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
PSEN1-204ENST00000394164 MINK1Q8N4C8 1332 aaPredicted RBP12.82□□□□□ -0.36
PSEN1-204ENST00000394164 STAG3Q9UJ98 1225 aa12.82□□□□□ -0.36
PSEN1-204ENST00000394164 POGZQ7Z3K3 1410 aa12.82□□□□□ -0.36
PSEN1-204ENST00000394164 PLEKHG5O94827 1062 aa12.82□□□□□ -0.36
PSEN1-204ENST00000394164 MTHFSP49914 203 aa12.82□□□□□ -0.36
PSEN1-204ENST00000394164 KIF1BO60333 1816 aa12.82□□□□□ -0.36
PSEN1-204ENST00000394164 MAP3K4Q9Y6R4 1608 aa12.81□□□□□ -0.36
PSEN1-204ENST00000394164 SLFN5Q08AF3 891 aa12.81□□□□□ -0.36
PSEN1-204ENST00000394164 VWDEQ8N2E2 1590 aa12.81□□□□□ -0.36
PSEN1-204ENST00000394164 ZMYM4Q5VZL5 1548 aa12.81□□□□□ -0.36
PSEN1-204ENST00000394164 CANXP27824 592 aaKnown RBP12.81□□□□□ -0.36
PSEN1-204ENST00000394164 GZF1Q9H116 711 aaPredicted RBP12.8□□□□□ -0.36
PSEN1-204ENST00000394164 FAM69CQ0P6D2 419 aa12.8□□□□□ -0.36
PSEN1-204ENST00000394164 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
PSEN1-204ENST00000394164 SYNMO15061 1565 aa12.8□□□□□ -0.36
PSEN1-204ENST00000394164 HSP90AA1P07900 732 aaKnown RBP12.79□□□□□ -0.36
PSEN1-204ENST00000394164 KDM5AP29375 1690 aaKnown RBP12.79□□□□□ -0.36
PSEN1-204ENST00000394164 YEATS2Q9ULM3 1422 aa12.79□□□□□ -0.36
PSEN1-204ENST00000394164 PNNQ9H307 717 aaKnown RBP12.79□□□□□ -0.36
PSEN1-204ENST00000394164 MYOM1P52179 1685 aa12.79□□□□□ -0.36
PSEN1-204ENST00000394164 FBLN1P23142 703 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 FAM161AQ3B820 660 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 C8orf34Q49A92 452 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 U2SURPO15042 1029 aaKnown RBP12.78□□□□□ -0.36
PSEN1-204ENST00000394164 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-204ENST00000394164 U2AF1L5P0DN76 240 aaPredicted RBP12.78□□□□□ -0.36
PSEN1-204ENST00000394164 U2AF1Q01081 240 aaKnown RBP eCLIP12.78□□□□□ -0.36
PSEN1-204ENST00000394164 PLPPR3Q6T4P5 718 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 SPRYD3Q8NCJ5 442 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 ZNF521Q96K83 1311 aa12.78□□□□□ -0.36
PSEN1-204ENST00000394164 FRMPD1Q5SYB0 1578 aa12.77□□□□□ -0.36
PSEN1-204ENST00000394164 TCP11L2Q8N4U5 519 aa12.77□□□□□ -0.36
PSEN1-204ENST00000394164 PANK1Q8TE04 598 aa12.77□□□□□ -0.36
PSEN1-204ENST00000394164 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
PSEN1-204ENST00000394164 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 CLUAP1Q96AJ1 413 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 MYOM2P54296 1465 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 PRAM1Q96QH2 718 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 TNNQ9UQP3 1299 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 COG6Q9Y2V7 657 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
PSEN1-204ENST00000394164 AEBP2Q6ZN18 517 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-204ENST00000394164 EVC2Q86UK5 1308 aa12.75□□□□□ -0.37
PSEN1-204ENST00000394164 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.75□□□□□ -0.37
PSEN1-204ENST00000394164 CGNL1Q0VF96 1302 aa12.74□□□□□ -0.37
PSEN1-204ENST00000394164 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.74□□□□□ -0.37
PSEN1-204ENST00000394164 PODXL2Q9NZ53 605 aa12.74□□□□□ -0.37
PSEN1-204ENST00000394164 E9PSI1 815 aa12.73□□□□□ -0.37
PSEN1-204ENST00000394164 ABCC3O15438 1527 aa12.73□□□□□ -0.37
PSEN1-204ENST00000394164 HECW2Q9P2P5 1572 aa12.73□□□□□ -0.37
PSEN1-204ENST00000394164 MLH3Q9UHC1 1453 aa12.73□□□□□ -0.37
PSEN1-204ENST00000394164 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
PSEN1-204ENST00000394164 SLC24A1O60721 1099 aa12.72□□□□□ -0.37
PSEN1-204ENST00000394164 WAPLQ7Z5K2 1190 aa12.72□□□□□ -0.37
PSEN1-204ENST00000394164 XRCC6P12956 609 aaKnown RBP eCLIP12.71□□□□□ -0.37
PSEN1-204ENST00000394164 TSR2Q969E8 191 aaKnown RBP12.71□□□□□ -0.37
PSEN1-204ENST00000394164 CFAP53Q96M91 514 aa12.71□□□□□ -0.37
PSEN1-204ENST00000394164 L1TD1Q5T7N2 865 aaKnown RBP12.71□□□□□ -0.38
PSEN1-204ENST00000394164 RUNDC1Q96C34 613 aa12.71□□□□□ -0.38
PSEN1-204ENST00000394164 NPC1L1Q9UHC9 1359 aa12.71□□□□□ -0.38
PSEN1-204ENST00000394164 SEC24BO95487 1268 aa12.7□□□□□ -0.38
PSEN1-204ENST00000394164 IGHDP01880 384 aa12.7□□□□□ -0.38
PSEN1-204ENST00000394164 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
PSEN1-204ENST00000394164 SIGLEC1Q9BZZ2 1709 aa12.7□□□□□ -0.38
PSEN1-204ENST00000394164 CENPQQ7L2Z9 268 aaPredicted RBP12.7□□□□□ -0.38
PSEN1-204ENST00000394164 CABP1Q9NZU7 370 aa12.7□□□□□ -0.38
PSEN1-204ENST00000394164 KDM2BQ8NHM5 1336 aa12.69□□□□□ -0.38
PSEN1-204ENST00000394164 NKTRP30414 1462 aaKnown RBP12.69□□□□□ -0.38
PSEN1-204ENST00000394164 TRMT2AQ8IZ69 625 aaKnown RBP12.69□□□□□ -0.38
PSEN1-204ENST00000394164 NRXN1Q9ULB1 1477 aa12.69□□□□□ -0.38
PSEN1-204ENST00000394164 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
PSEN1-204ENST00000394164 GOLGA6L3A6NEY3 463 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 RRP9O43818 475 aaKnown RBP12.68□□□□□ -0.38
PSEN1-204ENST00000394164 LMTK2Q8IWU2 1503 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 KIAA1210Q9ULL0 1709 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 ADGRB1O14514 1584 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 NUTM2FA1L443 756 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 IFT172Q9UG01 1749 aa12.68□□□□□ -0.38
PSEN1-204ENST00000394164 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 TSPOAP1O95153 1857 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 A0A1W2PP64 1363 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 POLR3AO14802 1390 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-204ENST00000394164 INSRP06213 1382 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 PPLO60437 1756 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 NCKAP5LQ9HCH0 1330 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 A0A0U1RQG5 324 aaPredicted RBP12.67□□□□□ -0.38
PSEN1-204ENST00000394164 RLBP1P12271 317 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
PSEN1-204ENST00000394164 CAMSAP1Q5T5Y3 1602 aa12.66□□□□□ -0.38
PSEN1-204ENST00000394164 SBNO2Q9Y2G9 1366 aa12.66□□□□□ -0.38
PSEN1-204ENST00000394164 GLI2P10070 1586 aa12.66□□□□□ -0.38
PSEN1-204ENST00000394164 DIP2CQ9Y2E4 1556 aa12.66□□□□□ -0.38
PSEN1-204ENST00000394164 FYB1O15117 783 aa12.65□□□□□ -0.38
PSEN1-204ENST00000394164 RARSP54136 660 aaKnown RBP12.64□□□□□ -0.39
PSEN1-204ENST00000394164 TULP4Q9NRJ4 1543 aa12.64□□□□□ -0.39
PSEN1-204ENST00000394164 CLCN1P35523 988 aa12.64□□□□□ -0.39
PSEN1-204ENST00000394164 ARID3AQ99856 593 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms