RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 VPS53Q5VIR6 699 aa11.33□□□□□ -0.6
CDH11-202ENST00000394156 KIF21AQ7Z4S6 1674 aa11.33□□□□□ -0.6
CDH11-202ENST00000394156 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.33□□□□□ -0.6
CDH11-202ENST00000394156 RBM42Q9BTD8 480 aaKnown RBP11.32□□□□□ -0.6
CDH11-202ENST00000394156 RRBP1Q9P2E9 1410 aaKnown RBP11.32□□□□□ -0.6
CDH11-202ENST00000394156 ZC3H6P61129 1189 aaKnown RBP11.32□□□□□ -0.6
CDH11-202ENST00000394156 TCP11L2Q8N4U5 519 aa11.32□□□□□ -0.6
CDH11-202ENST00000394156 CCDC85AQ96PX6 553 aaPredicted RBP11.32□□□□□ -0.6
CDH11-202ENST00000394156 THOC2Q8NI27 1593 aaKnown RBP11.32□□□□□ -0.6
CDH11-202ENST00000394156 NOB1Q9ULX3 412 aaKnown RBP11.31□□□□□ -0.6
CDH11-202ENST00000394156 EXOSC9Q06265 439 aaKnown RBP11.31□□□□□ -0.6
CDH11-202ENST00000394156 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
CDH11-202ENST00000394156 GPATCH3Q96I76 525 aa11.31□□□□□ -0.6
CDH11-202ENST00000394156 APPP05067 770 aa11.31□□□□□ -0.6
CDH11-202ENST00000394156 PROSER2Q86WR7 435 aaPredicted RBP11.31□□□□□ -0.6
CDH11-202ENST00000394156 SIL1Q9H173 461 aa11.31□□□□□ -0.6
CDH11-202ENST00000394156 PPP1R1BQ9UD71 204 aaPredicted RBP11.31□□□□□ -0.6
CDH11-202ENST00000394156 RIC3Q7Z5B4 369 aa11.31□□□□□ -0.6
CDH11-202ENST00000394156 DZIP1LQ8IYY4 767 aaKnown RBP11.31□□□□□ -0.6
CDH11-202ENST00000394156 CAMSAP2Q08AD1 1489 aa11.3□□□□□ -0.6
CDH11-202ENST00000394156 LMOD3Q0VAK6 560 aa11.3□□□□□ -0.6
CDH11-202ENST00000394156 NEUROD6Q96NK8 337 aa11.3□□□□□ -0.6
CDH11-202ENST00000394156 MCTP1Q6DN14 999 aa11.29□□□□□ -0.6
CDH11-202ENST00000394156 HMGXB3Q12766 1538 aa11.29□□□□□ -0.6
CDH11-202ENST00000394156 HMMRO75330 724 aa11.29□□□□□ -0.6
CDH11-202ENST00000394156 CENPQQ7L2Z9 268 aaPredicted RBP11.28□□□□□ -0.6
CDH11-202ENST00000394156 ANO2Q9NQ90 1003 aa11.28□□□□□ -0.6
CDH11-202ENST00000394156 KIAA1107Q9UPP5 1409 aa11.27□□□□□ -0.61
CDH11-202ENST00000394156 TMX4Q9H1E5 349 aaPredicted RBP11.27□□□□□ -0.61
CDH11-202ENST00000394156 RAPGEF4Q8WZA2 1011 aa11.27□□□□□ -0.61
CDH11-202ENST00000394156 MSNP26038 577 aaKnown RBP11.26□□□□□ -0.61
CDH11-202ENST00000394156 WWC1Q8IX03 1113 aa11.26□□□□□ -0.61
CDH11-202ENST00000394156 MCM10Q7L590 875 aa11.26□□□□□ -0.61
CDH11-202ENST00000394156 TROQ12816 1431 aaPredicted RBP11.26□□□□□ -0.61
CDH11-202ENST00000394156 RASSF8Q8NHQ8 419 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 KIF14Q15058 1648 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 IFIT2P09913 472 aaKnown RBP11.25□□□□□ -0.61
CDH11-202ENST00000394156 CCDC27Q2M243 656 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 ADGRF5Q8IZF2 1346 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 PDE3BQ13370 1112 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 C20orf194Q5TEA3 1177 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 VPS37DQ86XT2 251 aa11.25□□□□□ -0.61
CDH11-202ENST00000394156 DNAJC2Q99543 621 aaKnown RBP11.24□□□□□ -0.61
CDH11-202ENST00000394156 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
CDH11-202ENST00000394156 H3BQV1 296 aa11.24□□□□□ -0.61
CDH11-202ENST00000394156 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
CDH11-202ENST00000394156 PES1O00541 588 aaKnown RBP11.23□□□□□ -0.61
CDH11-202ENST00000394156 GBP4Q96PP9 640 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 DIAPH3Q9NSV4 1193 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 BICDL1Q6ZP65 573 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 TOM1L2Q6ZVM7 507 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 NAIPQ13075 1403 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 CUL7Q14999 1698 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 SLC4A2P04920 1241 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 NEXNQ0ZGT2 675 aa11.23□□□□□ -0.61
CDH11-202ENST00000394156 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
CDH11-202ENST00000394156 NME9Q86XW9 330 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 LAMC3Q9Y6N6 1575 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 ADAMTS2O95450 1211 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
CDH11-202ENST00000394156 CTTNBP2Q8WZ74 1663 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 ABCC5O15440 1437 aa11.22□□□□□ -0.61
CDH11-202ENST00000394156 L1TD1Q5T7N2 865 aaKnown RBP11.22□□□□□ -0.61
CDH11-202ENST00000394156 GRIN2AQ12879 1464 aa11.21□□□□□ -0.61
CDH11-202ENST00000394156 DDX19BQ9UMR2 479 aa11.21□□□□□ -0.62
CDH11-202ENST00000394156 SMARCA5O60264 1052 aaPredicted RBP11.2□□□□□ -0.62
CDH11-202ENST00000394156 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
CDH11-202ENST00000394156 RTEL1-TNFRSF6BF6WH68 1400 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 ABCA10Q8WWZ4 1543 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 ST18O60284 1047 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 G3BP1Q13283 466 aaKnown RBP eCLIP11.2□□□□□ -0.62
CDH11-202ENST00000394156 FAM184AQ8NB25 1140 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 WASHC4Q2M389 1173 aa11.2□□□□□ -0.62
CDH11-202ENST00000394156 BIVM-ERCC5R4GMW8 1640 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 SF3A1Q15459 793 aaKnown RBP11.19□□□□□ -0.62
CDH11-202ENST00000394156 MPNDQ8N594 471 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 PDZRN3Q9UPQ7 1066 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 GOLGA6L3A6NEY3 463 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 PTCD1O75127 700 aaKnown RBP11.19□□□□□ -0.62
CDH11-202ENST00000394156 UBTFL1P0CB47 393 aaPredicted RBP11.19□□□□□ -0.62
CDH11-202ENST00000394156 EMILIN1Q9Y6C2 1016 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 HFM1A2PYH4 1435 aa11.19□□□□□ -0.62
CDH11-202ENST00000394156 FAM83GA6ND36 823 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 STK3Q13188 491 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 NUDT16Q96DE0 195 aaKnown RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 MIA2Q96PC5 1412 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 FOXO3O43524 673 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 SURF6O75683 361 aaKnown RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 PIP4K2AP48426 406 aaPredicted RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 CEBPZQ03701 1054 aaKnown RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 ZRANB1Q9UGI0 708 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 DHX16O60231 1041 aaKnown RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 PLEKHH2Q8IVE3 1493 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 VPS37CA5D8V6 355 aaPredicted RBP11.18□□□□□ -0.62
CDH11-202ENST00000394156 TSPOAP1O95153 1857 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 MARCH6O60337 910 aa11.18□□□□□ -0.62
CDH11-202ENST00000394156 GNAI1P63096 354 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms