RNA–Protein interactions for RNA: ENST00000394089.6

RARA-204, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RARA, Length 2,024 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-204ENST00000394089 PRAM1Q96QH2 718 aa31.17■■■□□ 2.58
RARA-204ENST00000394089 SLIT1O75093 1534 aa31.15■■■□□ 2.58
RARA-204ENST00000394089 POGKQ9P215 609 aa31.15■■■□□ 2.58
RARA-204ENST00000394089 ARHGAP23Q9P227 1491 aa31.15■■■□□ 2.58
RARA-204ENST00000394089 HNRNPUQ00839 825 aaKnown RBP eCLIP31.14■■■□□ 2.58
RARA-204ENST00000394089 PLEKHG1Q9ULL1 1385 aa31.14■■■□□ 2.57
RARA-204ENST00000394089 ADAMTSL3P82987 1691 aa31.13■■■□□ 2.57
RARA-204ENST00000394089 RIMS1Q86UR5 1692 aaKnown RBP31.13■■■□□ 2.57
RARA-204ENST00000394089 PNISRQ8TF01 805 aaKnown RBP31.12■■■□□ 2.57
RARA-204ENST00000394089 METP08581 1390 aa31.11■■■□□ 2.57
RARA-204ENST00000394089 SAFB2Q14151 953 aaKnown RBP eCLIP31.1■■■□□ 2.57
RARA-204ENST00000394089 PLPPR3Q6T4P5 718 aa31.09■■■□□ 2.57
RARA-204ENST00000394089 ADAMTS13Q76LX8 1427 aa31.09■■■□□ 2.57
RARA-204ENST00000394089 LTKP29376 864 aa31.08■■■□□ 2.57
RARA-204ENST00000394089 CARD14Q9BXL6 1004 aa31.08■■■□□ 2.57
RARA-204ENST00000394089 KNDC1Q76NI1 1749 aa31.08■■■□□ 2.57
RARA-204ENST00000394089 THEMISQ8N1K5 641 aaPredicted RBP31.08■■■□□ 2.57
RARA-204ENST00000394089 EID1Q9Y6B2 187 aa31.08■■■□□ 2.57
RARA-204ENST00000394089 TECPR2O15040 1411 aa31.07■■■□□ 2.57
RARA-204ENST00000394089 TXNDC2Q86VQ3 553 aa31.07■■■□□ 2.56
RARA-204ENST00000394089 SIRT1Q96EB6 747 aa31.07■■■□□ 2.56
RARA-204ENST00000394089 NINLQ9Y2I6 1382 aa31.07■■■□□ 2.56
RARA-204ENST00000394089 SLC12A5Q9H2X9 1139 aa31.06■■■□□ 2.56
RARA-204ENST00000394089 MINK1Q8N4C8 1332 aaPredicted RBP31.05■■■□□ 2.56
RARA-204ENST00000394089 CABP2Q9NPB3 220 aa31.05■■■□□ 2.56
RARA-204ENST00000394089 MED14O60244 1454 aa31.03■■■□□ 2.56
RARA-204ENST00000394089 ATAD2Q6PL18 1390 aa31.03■■■□□ 2.56
RARA-204ENST00000394089 FAM135BQ49AJ0 1406 aa31.03■■■□□ 2.56
RARA-204ENST00000394089 CEP170BQ9Y4F5 1589 aaPredicted RBP31.02■■■□□ 2.56
RARA-204ENST00000394089 CPS1P31327 1500 aa31.02■■■□□ 2.56
RARA-204ENST00000394089 ERICH6Q7L0X2 663 aa31.02■■■□□ 2.56
RARA-204ENST00000394089 ANKRD36BQ8N2N9 1353 aa31.01■■■□□ 2.55
RARA-204ENST00000394089 SRPK2P78362 688 aaKnown RBP31■■■□□ 2.55
RARA-204ENST00000394089 USP32Q8NFA0 1604 aa31■■■□□ 2.55
RARA-204ENST00000394089 PLEKHH1Q9ULM0 1364 aa31■■■□□ 2.55
RARA-204ENST00000394089 NSD3Q9BZ95 1437 aa31■■■□□ 2.55
RARA-204ENST00000394089 WAPLQ7Z5K2 1190 aa30.99■■■□□ 2.55
RARA-204ENST00000394089 PPP2R1AP30153 589 aa30.98■■■□□ 2.55
RARA-204ENST00000394089 ZBED9Q6R2W3 1325 aa30.98■■■□□ 2.55
RARA-204ENST00000394089 CDK19Q9BWU1 502 aa30.97■■■□□ 2.55
RARA-204ENST00000394089 ZNF142P52746 1687 aaPredicted RBP30.94■■■□□ 2.54
RARA-204ENST00000394089 DIP2AQ14689 1571 aa30.93■■■□□ 2.54
RARA-204ENST00000394089 TBX22Q9Y458 520 aa30.93■■■□□ 2.54
RARA-204ENST00000394089 INSRP06213 1382 aa30.92■■■□□ 2.54
RARA-204ENST00000394089 CGNL1Q0VF96 1302 aa30.88■■■□□ 2.53
RARA-204ENST00000394089 ROBO2Q9HCK4 1378 aa30.87■■■□□ 2.53
RARA-204ENST00000394089 A0A1W2PP64 1363 aa30.87■■■□□ 2.53
RARA-204ENST00000394089 NSD2O96028 1365 aa30.87■■■□□ 2.53
RARA-204ENST00000394089 SLC26A8Q96RN1 970 aa30.86■■■□□ 2.53
RARA-204ENST00000394089 TERF2IPQ9NYB0 399 aa30.86■■■□□ 2.53
RARA-204ENST00000394089 WASLO00401 505 aaPredicted RBP30.86■■■□□ 2.53
RARA-204ENST00000394089 PTPRUQ92729 1446 aa30.85■■■□□ 2.53
RARA-204ENST00000394089 CD163L1Q9NR16 1453 aa30.85■■■□□ 2.53
RARA-204ENST00000394089 PRKCSHP14314 528 aaPredicted RBP30.85■■■□□ 2.53
RARA-204ENST00000394089 SETD1BQ9UPS6 1966 aaKnown RBP30.85■■■□□ 2.53
RARA-204ENST00000394089 PPP4R2Q9NY27 417 aa30.84■■■□□ 2.53
RARA-204ENST00000394089 DEKP35659 375 aaKnown RBP30.82■■■□□ 2.52
RARA-204ENST00000394089 ADGRB2O60241 1585 aa30.81■■■□□ 2.52
RARA-204ENST00000394089 MORC1Q86VD1 984 aa30.81■■■□□ 2.52
RARA-204ENST00000394089 ATP7BP35670 1465 aa30.8■■■□□ 2.52
RARA-204ENST00000394089 HDGFL2Q7Z4V5 671 aaPredicted RBP30.8■■■□□ 2.52
RARA-204ENST00000394089 CABP1Q9NZU7 370 aa30.79■■■□□ 2.52
RARA-204ENST00000394089 BLMP54132 1417 aaPredicted RBP30.79■■■□□ 2.52
RARA-204ENST00000394089 PTCH1Q13635 1447 aa30.79■■■□□ 2.52
RARA-204ENST00000394089 ANKLE2Q86XL3 938 aa30.78■■■□□ 2.52
RARA-204ENST00000394089 AMOTL2Q9Y2J4 779 aa30.78■■■□□ 2.52
RARA-204ENST00000394089 PIK3R4Q99570 1358 aa30.77■■■□□ 2.52
RARA-204ENST00000394089 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.76■■■□□ 2.51
RARA-204ENST00000394089 XRN1Q8IZH2 1706 aaKnown RBP30.74■■■□□ 2.51
RARA-204ENST00000394089 POLR3AO14802 1390 aaPredicted RBP30.73■■■□□ 2.51
RARA-204ENST00000394089 NUDT16Q96DE0 195 aaKnown RBP30.72■■■□□ 2.51
RARA-204ENST00000394089 PPIP5K1Q6PFW1 1433 aa30.71■■■□□ 2.51
RARA-204ENST00000394089 WDR43Q15061 677 aaKnown RBP eCLIP30.71■■■□□ 2.51
RARA-204ENST00000394089 ADAMTS8Q9UP79 889 aa30.69■■■□□ 2.5
RARA-204ENST00000394089 CCDC61Q9Y6R9 512 aa30.69■■■□□ 2.5
RARA-204ENST00000394089 CPSF1Q10570 1443 aaKnown RBP30.69■■■□□ 2.5
RARA-204ENST00000394089 ANKRD26Q9UPS8 1709 aa30.68■■■□□ 2.5
RARA-204ENST00000394089 CDC42BPGQ6DT37 1551 aa30.66■■■□□ 2.5
RARA-204ENST00000394089 FYB1O15117 783 aa30.66■■■□□ 2.5
RARA-204ENST00000394089 SMG6Q86US8 1419 aaKnown RBP30.65■■■□□ 2.5
RARA-204ENST00000394089 PRR36Q9H6K5 1346 aa30.64■■■□□ 2.5
RARA-204ENST00000394089 KIF20BQ96Q89 1820 aa30.63■■■□□ 2.49
RARA-204ENST00000394089 TNNT2P45379 298 aaPredicted RBP30.62■■■□□ 2.49
RARA-204ENST00000394089 NOP58Q9Y2X3 529 aaKnown RBP30.62■■■□□ 2.49
RARA-204ENST00000394089 EDC4Q6P2E9 1401 aaKnown RBP30.62■■■□□ 2.49
RARA-204ENST00000394089 GGNBP2Q9H3C7 697 aa30.61■■■□□ 2.49
RARA-204ENST00000394089 TOPAZ1Q8N9V7 1692 aa30.61■■■□□ 2.49
RARA-204ENST00000394089 KCNA6P17658 529 aa30.59■■■□□ 2.49
RARA-204ENST00000394089 CHD2O14647 1828 aaKnown RBP30.58■■■□□ 2.49
RARA-204ENST00000394089 NPHP4O75161 1426 aaPredicted RBP30.58■■■□□ 2.49
RARA-204ENST00000394089 AKAP12Q02952 1782 aa30.58■■■□□ 2.49
RARA-204ENST00000394089 MTHFSP49914 203 aa30.58■■■□□ 2.49
RARA-204ENST00000394089 NUDCQ9Y266 331 aa30.58■■■□□ 2.49
RARA-204ENST00000394089 MON2Q7Z3U7 1717 aa30.58■■■□□ 2.49
RARA-204ENST00000394089 ZNF692Q9BU19 519 aaPredicted RBP30.57■■■□□ 2.49
RARA-204ENST00000394089 NCKAP5LQ9HCH0 1330 aa30.57■■■□□ 2.48
RARA-204ENST00000394089 IRX6P78412 446 aaPredicted RBP30.56■■■□□ 2.48
RARA-204ENST00000394089 PDE3BQ13370 1112 aa30.56■■■□□ 2.48
RARA-204ENST00000394089 CFAP53Q96M91 514 aa30.56■■■□□ 2.48
RARA-204ENST00000394089 ITSN1Q15811 1721 aa30.56■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms