RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 SRCAPQ6ZRS2 3230 aa11.71□□□□□ -0.54
GAPVD1-204ENST00000394083 SLC12A5Q9H2X9 1139 aa11.71□□□□□ -0.54
GAPVD1-204ENST00000394083 FBLN1P23142 703 aa11.7□□□□□ -0.54
GAPVD1-204ENST00000394083 ADAMTS8Q9UP79 889 aa11.7□□□□□ -0.54
GAPVD1-204ENST00000394083 PPP2R1AP30153 589 aa11.69□□□□□ -0.54
GAPVD1-204ENST00000394083 VIRMAQ69YN4 1812 aaKnown RBP11.69□□□□□ -0.54
GAPVD1-204ENST00000394083 WASHC2CQ9Y4E1 1318 aa11.69□□□□□ -0.54
GAPVD1-204ENST00000394083 NPC1L1Q9UHC9 1359 aa11.68□□□□□ -0.54
GAPVD1-204ENST00000394083 TRAK1Q9UPV9 953 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 A0A1W2PP64 1363 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 YTHDC2Q9H6S0 1430 aaKnown RBP11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 ADAMTSL3P82987 1691 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 C20orf194Q5TEA3 1177 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 POLR3GLQ9BT43 218 aa11.67□□□□□ -0.54
GAPVD1-204ENST00000394083 TRMT2AQ8IZ69 625 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-204ENST00000394083 CHD2O14647 1828 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-204ENST00000394083 PIK3C2AO00443 1686 aa11.66□□□□□ -0.54
GAPVD1-204ENST00000394083 XIRP1Q702N8 1843 aaKnown RBP11.66□□□□□ -0.54
GAPVD1-204ENST00000394083 MSH5O43196 834 aa11.65□□□□□ -0.54
GAPVD1-204ENST00000394083 INSRP06213 1382 aa11.65□□□□□ -0.54
GAPVD1-204ENST00000394083 FMN2Q9NZ56 1722 aa11.65□□□□□ -0.55
GAPVD1-204ENST00000394083 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.55
GAPVD1-204ENST00000394083 CRYBG1Q9Y4K1 1723 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 ITSN1Q15811 1721 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 NSD3Q9BZ95 1437 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 ATP7BP35670 1465 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 ZMYM3Q14202 1370 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 KANK1Q14678 1352 aa11.64□□□□□ -0.55
GAPVD1-204ENST00000394083 ARHGAP23Q9P227 1491 aa11.63□□□□□ -0.55
GAPVD1-204ENST00000394083 LTKP29376 864 aa11.63□□□□□ -0.55
GAPVD1-204ENST00000394083 ZNF142P52746 1687 aaPredicted RBP11.63□□□□□ -0.55
GAPVD1-204ENST00000394083 TECPR2O15040 1411 aa11.63□□□□□ -0.55
GAPVD1-204ENST00000394083 USP54Q70EL1 1684 aa11.62□□□□□ -0.55
GAPVD1-204ENST00000394083 PRR36Q9H6K5 1346 aa11.62□□□□□ -0.55
GAPVD1-204ENST00000394083 CPSF1Q10570 1443 aaKnown RBP11.62□□□□□ -0.55
GAPVD1-204ENST00000394083 SLIT1O75093 1534 aa11.62□□□□□ -0.55
GAPVD1-204ENST00000394083 ROBO2Q9HCK4 1378 aa11.61□□□□□ -0.55
GAPVD1-204ENST00000394083 WAPLQ7Z5K2 1190 aa11.61□□□□□ -0.55
GAPVD1-204ENST00000394083 KTN1Q86UP2 1357 aaKnown RBP11.61□□□□□ -0.55
GAPVD1-204ENST00000394083 CEBPAP49715 358 aaPredicted RBP11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 DUSP27Q5VZP5 1158 aa11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 CABP2Q9NPB3 220 aa11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 ABCC11Q96J66 1382 aa11.6□□□□□ -0.55
GAPVD1-204ENST00000394083 ZRANB1Q9UGI0 708 aa11.59□□□□□ -0.55
GAPVD1-204ENST00000394083 SSH2Q76I76 1423 aa11.59□□□□□ -0.55
GAPVD1-204ENST00000394083 NWD1Q149M9 1564 aa11.58□□□□□ -0.56
GAPVD1-204ENST00000394083 CENPJQ9HC77 1338 aaPredicted RBP11.58□□□□□ -0.56
GAPVD1-204ENST00000394083 RIMS2Q9UQ26 1411 aa11.58□□□□□ -0.56
GAPVD1-204ENST00000394083 RALBP1Q15311 655 aa11.58□□□□□ -0.56
GAPVD1-204ENST00000394083 TMF1P82094 1093 aa11.58□□□□□ -0.56
GAPVD1-204ENST00000394083 RGPD5Q99666 1765 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 PLIN1O60240 522 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 TNNQ9UQP3 1299 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 PCNTO95613 3336 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 B4GALNT3Q6L9W6 998 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 NUDCQ9Y266 331 aa11.57□□□□□ -0.56
GAPVD1-204ENST00000394083 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
GAPVD1-204ENST00000394083 PLEKHF1Q96S99 279 aa11.56□□□□□ -0.56
GAPVD1-204ENST00000394083 SALL2Q9Y467 1007 aaPredicted RBP11.56□□□□□ -0.56
GAPVD1-204ENST00000394083 PNPLA6Q8IY17 1366 aa11.56□□□□□ -0.56
GAPVD1-204ENST00000394083 SAFB2Q14151 953 aaKnown RBP eCLIP11.55□□□□□ -0.56
GAPVD1-204ENST00000394083 ANKRD36BQ8N2N9 1353 aa11.55□□□□□ -0.56
GAPVD1-204ENST00000394083 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 POLR3AO14802 1390 aaPredicted RBP11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 LTN1O94822 1766 aa11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 FYB1O15117 783 aa11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 RPGRIP1LQ68CZ1 1315 aa11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 PRAM1Q96QH2 718 aa11.54□□□□□ -0.56
GAPVD1-204ENST00000394083 TUBGCP6Q96RT7 1819 aa11.53□□□□□ -0.56
GAPVD1-204ENST00000394083 MLECQ14165 292 aa11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 TMEM2Q9UHN6 1383 aa11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 TRPM3Q9HCF6 1732 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 CEP170BQ9Y4F5 1589 aaPredicted RBP11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 STAC3Q96MF2 364 aa11.51□□□□□ -0.57
GAPVD1-204ENST00000394083 EXOC6Q8TAG9 804 aa11.5□□□□□ -0.57
GAPVD1-204ENST00000394083 DIP2AQ14689 1571 aa11.5□□□□□ -0.57
GAPVD1-204ENST00000394083 CHGAP10645 457 aaKnown RBP11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 TMC1Q8TDI8 760 aa11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 STK26Q9P289 416 aa11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 STRCQ7RTU9 1775 aa11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 LRRC37A3O60309 1634 aa11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 SETD1BQ9UPS6 1966 aaKnown RBP11.49□□□□□ -0.57
GAPVD1-204ENST00000394083 MINK1Q8N4C8 1332 aaPredicted RBP11.48□□□□□ -0.57
GAPVD1-204ENST00000394083 TRIM35Q9UPQ4 493 aa11.48□□□□□ -0.57
GAPVD1-204ENST00000394083 KDM2BQ8NHM5 1336 aa11.47□□□□□ -0.57
GAPVD1-204ENST00000394083 MYT1LQ9UL68 1186 aa11.47□□□□□ -0.57
GAPVD1-204ENST00000394083 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
GAPVD1-204ENST00000394083 SLFN5Q08AF3 891 aa11.47□□□□□ -0.57
GAPVD1-204ENST00000394083 OVOS2A0A0J9YW53 1432 aa11.46□□□□□ -0.58
GAPVD1-204ENST00000394083 OVOS2Q6IE36 1432 aa11.46□□□□□ -0.58
GAPVD1-204ENST00000394083 APAF1O14727 1248 aa11.46□□□□□ -0.58
GAPVD1-204ENST00000394083 BCAR3O75815 825 aa11.46□□□□□ -0.58
GAPVD1-204ENST00000394083 RRP1P56182 461 aaKnown RBP11.46□□□□□ -0.58
GAPVD1-204ENST00000394083 EIF3AQ14152 1382 aaKnown RBP11.45□□□□□ -0.58
GAPVD1-204ENST00000394083 RLBP1P12271 317 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms