RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ABCC11Q96J66 1382 aa26.08■■□□□ 1.77
SNRPA1-202ENST00000394082 LRPPRCP42704 1394 aaKnown RBP26.07■■□□□ 1.76
SNRPA1-202ENST00000394082 UPF1Q92900 1129 aaKnown RBP eCLIP26.07■■□□□ 1.76
SNRPA1-202ENST00000394082 C8orf37Q96NL8 207 aa26.07■■□□□ 1.76
SNRPA1-202ENST00000394082 PIK3C2GO75747 1445 aa26.06■■□□□ 1.76
SNRPA1-202ENST00000394082 RGL3Q3MIN7 710 aa26.06■■□□□ 1.76
SNRPA1-202ENST00000394082 NPHP3Q7Z494 1330 aa26.05■■□□□ 1.76
SNRPA1-202ENST00000394082 COL22A1Q8NFW1 1626 aaPredicted RBP26.04■■□□□ 1.76
SNRPA1-202ENST00000394082 RBM6P78332 1123 aaKnown RBP26.04■■□□□ 1.76
SNRPA1-202ENST00000394082 KNDC1Q76NI1 1749 aa26.04■■□□□ 1.76
SNRPA1-202ENST00000394082 QTRT2Q9H974 415 aaKnown RBP26.03■■□□□ 1.76
SNRPA1-202ENST00000394082 SIRT1Q96EB6 747 aa26.02■■□□□ 1.76
SNRPA1-202ENST00000394082 NGLY1Q96IV0 654 aa26.01■■□□□ 1.75
SNRPA1-202ENST00000394082 ESCO1Q5FWF5 840 aa26■■□□□ 1.75
SNRPA1-202ENST00000394082 PXDNQ92626 1479 aa25.99■■□□□ 1.75
SNRPA1-202ENST00000394082 ADAMTS2O95450 1211 aa25.98■■□□□ 1.75
SNRPA1-202ENST00000394082 FNBP4Q8N3X1 1017 aaPredicted RBP25.98■■□□□ 1.75
SNRPA1-202ENST00000394082 NRXN1Q9ULB1 1477 aa25.98■■□□□ 1.75
SNRPA1-202ENST00000394082 YTHDC2Q9H6S0 1430 aaKnown RBP25.97■■□□□ 1.75
SNRPA1-202ENST00000394082 WAPLQ7Z5K2 1190 aa25.97■■□□□ 1.75
SNRPA1-202ENST00000394082 STK26Q9P289 416 aa25.97■■□□□ 1.75
SNRPA1-202ENST00000394082 MYOM2P54296 1465 aa25.97■■□□□ 1.75
SNRPA1-202ENST00000394082 RGS12O14924 1447 aa25.97■■□□□ 1.75
SNRPA1-202ENST00000394082 C14orf93Q9H972 538 aaKnown RBP25.96■■□□□ 1.75
SNRPA1-202ENST00000394082 TMEM132EQ6IEE7 984 aa25.95■■□□□ 1.74
SNRPA1-202ENST00000394082 FOXO3O43524 673 aa25.94■■□□□ 1.74
SNRPA1-202ENST00000394082 USP21Q9UK80 565 aa25.93■■□□□ 1.74
SNRPA1-202ENST00000394082 TRPC5Q9UL62 973 aaPredicted RBP25.93■■□□□ 1.74
SNRPA1-202ENST00000394082 PLEKHH1Q9ULM0 1364 aa25.93■■□□□ 1.74
SNRPA1-202ENST00000394082 FMN2Q9NZ56 1722 aa25.92■■□□□ 1.74
SNRPA1-202ENST00000394082 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
SNRPA1-202ENST00000394082 DHX57Q6P158 1386 aaKnown RBP25.9■■□□□ 1.74
SNRPA1-202ENST00000394082 ATRNO75882 1429 aa25.88■■□□□ 1.73
SNRPA1-202ENST00000394082 MARF1Q9Y4F3 1742 aaKnown RBP25.87■■□□□ 1.73
SNRPA1-202ENST00000394082 RAB3GAP2Q9H2M9 1393 aa25.86■■□□□ 1.73
SNRPA1-202ENST00000394082 CFAP70Q5T0N1 1121 aa25.85■■□□□ 1.73
SNRPA1-202ENST00000394082 SPATA31A3Q5VYP0 1347 aa25.85■■□□□ 1.73
SNRPA1-202ENST00000394082 BCL9LQ86UU0 1499 aa25.85■■□□□ 1.73
SNRPA1-202ENST00000394082 DLC1Q96QB1 1528 aa25.84■■□□□ 1.73
SNRPA1-202ENST00000394082 NUTM2FA1L443 756 aa25.84■■□□□ 1.73
SNRPA1-202ENST00000394082 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
SNRPA1-202ENST00000394082 ATAD2Q6PL18 1390 aa25.82■■□□□ 1.72
SNRPA1-202ENST00000394082 STAC3Q96MF2 364 aa25.81■■□□□ 1.72
SNRPA1-202ENST00000394082 HRCP23327 699 aa25.8■■□□□ 1.72
SNRPA1-202ENST00000394082 KRT28Q7Z3Y7 464 aa25.79■■□□□ 1.72
SNRPA1-202ENST00000394082 PHF8Q9UPP1 1060 aa25.79■■□□□ 1.72
SNRPA1-202ENST00000394082 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.79■■□□□ 1.72
SNRPA1-202ENST00000394082 PSME1Q06323 249 aa25.78■■□□□ 1.72
SNRPA1-202ENST00000394082 PRAM1Q96QH2 718 aa25.78■■□□□ 1.72
SNRPA1-202ENST00000394082 ANKARQ7Z5J8 1434 aa25.77■■□□□ 1.72
SNRPA1-202ENST00000394082 ADGRB1O14514 1584 aa25.77■■□□□ 1.72
SNRPA1-202ENST00000394082 EP400Q96L91 3159 aa25.77■■□□□ 1.72
SNRPA1-202ENST00000394082 GJD4Q96KN9 370 aaPredicted RBP25.76■■□□□ 1.71
SNRPA1-202ENST00000394082 SBNO1A3KN83 1393 aa25.76■■□□□ 1.71
SNRPA1-202ENST00000394082 TNS3Q68CZ2 1445 aa25.76■■□□□ 1.71
SNRPA1-202ENST00000394082 SLIT2O94813 1529 aa25.76■■□□□ 1.71
SNRPA1-202ENST00000394082 ADGRB2O60241 1585 aa25.76■■□□□ 1.71
SNRPA1-202ENST00000394082 RGPD8O14715 1765 aaPredicted RBP25.74■■□□□ 1.71
SNRPA1-202ENST00000394082 USP32Q8NFA0 1604 aa25.74■■□□□ 1.71
SNRPA1-202ENST00000394082 UNC5CLQ8IV45 518 aa25.73■■□□□ 1.71
SNRPA1-202ENST00000394082 POGKQ9P215 609 aa25.72■■□□□ 1.71
SNRPA1-202ENST00000394082 ARHGEF10O15013 1369 aa25.71■■□□□ 1.71
SNRPA1-202ENST00000394082 CCDC125Q86Z20 511 aa25.71■■□□□ 1.71
SNRPA1-202ENST00000394082 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
SNRPA1-202ENST00000394082 SAFB2Q14151 953 aaKnown RBP eCLIP25.68■■□□□ 1.7
SNRPA1-202ENST00000394082 RALGAPBQ86X10 1494 aa25.66■■□□□ 1.7
SNRPA1-202ENST00000394082 DCAF11Q8TEB1 546 aa25.66■■□□□ 1.7
SNRPA1-202ENST00000394082 TRAK1Q9UPV9 953 aa25.65■■□□□ 1.7
SNRPA1-202ENST00000394082 NWD2Q9ULI1 1742 aa25.65■■□□□ 1.7
SNRPA1-202ENST00000394082 GLI3P10071 1580 aa25.65■■□□□ 1.7
SNRPA1-202ENST00000394082 HAP1P54257 671 aaPredicted RBP25.63■■□□□ 1.69
SNRPA1-202ENST00000394082 TULP4Q9NRJ4 1543 aa25.63■■□□□ 1.69
SNRPA1-202ENST00000394082 VPS72Q15906 364 aa25.62■■□□□ 1.69
SNRPA1-202ENST00000394082 ABCA3Q99758 1704 aa25.62■■□□□ 1.69
SNRPA1-202ENST00000394082 SRCAPQ6ZRS2 3230 aa25.61■■□□□ 1.69
SNRPA1-202ENST00000394082 PMFBP1Q8TBY8 1022 aa25.61■■□□□ 1.69
SNRPA1-202ENST00000394082 KDM2AQ9Y2K7 1162 aa25.61■■□□□ 1.69
SNRPA1-202ENST00000394082 TRPM3Q9HCF6 1732 aaPredicted RBP25.6■■□□□ 1.69
SNRPA1-202ENST00000394082 WASLO00401 505 aaPredicted RBP25.6■■□□□ 1.69
SNRPA1-202ENST00000394082 ONECUT3O60422 494 aaPredicted RBP25.6■■□□□ 1.69
SNRPA1-202ENST00000394082 CABLES1Q8TDN4 633 aa25.6■■□□□ 1.69
SNRPA1-202ENST00000394082 GPRASP1Q5JY77 1395 aa25.59■■□□□ 1.69
SNRPA1-202ENST00000394082 PLCH1Q4KWH8 1693 aa25.58■■□□□ 1.69
SNRPA1-202ENST00000394082 MINK1Q8N4C8 1332 aaPredicted RBP25.58■■□□□ 1.69
SNRPA1-202ENST00000394082 PRR36Q9H6K5 1346 aa25.58■■□□□ 1.69
SNRPA1-202ENST00000394082 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
SNRPA1-202ENST00000394082 HIRIP3Q9BW71 556 aaPredicted RBP25.57■■□□□ 1.68
SNRPA1-202ENST00000394082 ALS2Q96Q42 1657 aa25.57■■□□□ 1.68
SNRPA1-202ENST00000394082 FAM83GA6ND36 823 aa25.55■■□□□ 1.68
SNRPA1-202ENST00000394082 BLMP54132 1417 aaPredicted RBP25.54■■□□□ 1.68
SNRPA1-202ENST00000394082 ARHGEF28Q8N1W1 1705 aaKnown RBP25.54■■□□□ 1.68
SNRPA1-202ENST00000394082 SEPT12Q8IYM1 358 aa25.52■■□□□ 1.68
SNRPA1-202ENST00000394082 ZRANB1Q9UGI0 708 aa25.52■■□□□ 1.68
SNRPA1-202ENST00000394082 BRWD3Q6RI45 1802 aa25.51■■□□□ 1.67
SNRPA1-202ENST00000394082 ITSN1Q15811 1721 aa25.5■■□□□ 1.67
SNRPA1-202ENST00000394082 KIAA1210Q9ULL0 1709 aa25.5■■□□□ 1.67
SNRPA1-202ENST00000394082 COL14A1Q05707 1796 aaKnown RBP25.49■■□□□ 1.67
SNRPA1-202ENST00000394082 ATP7BP35670 1465 aa25.49■■□□□ 1.67
SNRPA1-202ENST00000394082 NGDNQ8NEJ9 315 aaKnown RBP25.49■■□□□ 1.67
SNRPA1-202ENST00000394082 NRAPQ86VF7 1730 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms