RNA–Protein interactions for RNA: ENST00000393988.2

KRT41P-201, Transcript of keratin 41 pseudogene, humanhuman

BASIC

Gene KRT41P, Length 1,293 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT41P-201ENST00000393988 XPCQ01831 940 aaPredicted RBP17.72■□□□□ 0.43
KRT41P-201ENST00000393988 NGLY1Q96IV0 654 aa17.72■□□□□ 0.43
KRT41P-201ENST00000393988 IFT172Q9UG01 1749 aa17.72■□□□□ 0.43
KRT41P-201ENST00000393988 LRPPRCP42704 1394 aaKnown RBP17.71■□□□□ 0.43
KRT41P-201ENST00000393988 PRAG1Q86YV5 1406 aa17.71■□□□□ 0.43
KRT41P-201ENST00000393988 SOS2Q07890 1332 aaPredicted RBP17.71■□□□□ 0.42
KRT41P-201ENST00000393988 RAB3GAP2Q9H2M9 1393 aa17.7■□□□□ 0.42
KRT41P-201ENST00000393988 PLEKHH1Q9ULM0 1364 aa17.7■□□□□ 0.42
KRT41P-201ENST00000393988 QTRT2Q9H974 415 aaKnown RBP17.7■□□□□ 0.42
KRT41P-201ENST00000393988 FOXO3O43524 673 aa17.69■□□□□ 0.42
KRT41P-201ENST00000393988 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
KRT41P-201ENST00000393988 PIK3C2GO75747 1445 aa17.68■□□□□ 0.42
KRT41P-201ENST00000393988 CFAP70Q5T0N1 1121 aa17.68■□□□□ 0.42
KRT41P-201ENST00000393988 ABCC11Q96J66 1382 aa17.67■□□□□ 0.42
KRT41P-201ENST00000393988 YTHDC2Q9H6S0 1430 aaKnown RBP17.67■□□□□ 0.42
KRT41P-201ENST00000393988 SAFB2Q14151 953 aaKnown RBP eCLIP17.67■□□□□ 0.42
KRT41P-201ENST00000393988 NPHP3Q7Z494 1330 aa17.67■□□□□ 0.42
KRT41P-201ENST00000393988 CDC42BPGQ6DT37 1551 aa17.66■□□□□ 0.42
KRT41P-201ENST00000393988 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
KRT41P-201ENST00000393988 LAMC1P11047 1609 aa17.65■□□□□ 0.42
KRT41P-201ENST00000393988 TECPR2O15040 1411 aa17.65■□□□□ 0.42
KRT41P-201ENST00000393988 UPF1Q92900 1129 aaKnown RBP eCLIP17.65■□□□□ 0.42
KRT41P-201ENST00000393988 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
KRT41P-201ENST00000393988 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
KRT41P-201ENST00000393988 DHX57Q6P158 1386 aaKnown RBP17.64■□□□□ 0.41
KRT41P-201ENST00000393988 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
KRT41P-201ENST00000393988 USP21Q9UK80 565 aa17.63■□□□□ 0.41
KRT41P-201ENST00000393988 KNDC1Q76NI1 1749 aa17.62■□□□□ 0.41
KRT41P-201ENST00000393988 PRAM1Q96QH2 718 aa17.61■□□□□ 0.41
KRT41P-201ENST00000393988 POGKQ9P215 609 aa17.61■□□□□ 0.41
KRT41P-201ENST00000393988 PXDNQ92626 1479 aa17.61■□□□□ 0.41
KRT41P-201ENST00000393988 MYOM2P54296 1465 aa17.59■□□□□ 0.41
KRT41P-201ENST00000393988 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
KRT41P-201ENST00000393988 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
KRT41P-201ENST00000393988 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
KRT41P-201ENST00000393988 SIRT1Q96EB6 747 aa17.59■□□□□ 0.41
KRT41P-201ENST00000393988 FMN2Q9NZ56 1722 aa17.58■□□□□ 0.41
KRT41P-201ENST00000393988 NRXN1Q9ULB1 1477 aa17.58■□□□□ 0.41
KRT41P-201ENST00000393988 RGS12O14924 1447 aa17.58■□□□□ 0.41
KRT41P-201ENST00000393988 TRPC5Q9UL62 973 aaPredicted RBP17.58■□□□□ 0.4
KRT41P-201ENST00000393988 PHF8Q9UPP1 1060 aa17.57■□□□□ 0.4
KRT41P-201ENST00000393988 TRAK1Q9UPV9 953 aa17.57■□□□□ 0.4
KRT41P-201ENST00000393988 RGPD8O14715 1765 aaPredicted RBP17.57■□□□□ 0.4
KRT41P-201ENST00000393988 COL22A1Q8NFW1 1626 aaPredicted RBP17.57■□□□□ 0.4
KRT41P-201ENST00000393988 LMOD2Q6P5Q4 547 aa17.56■□□□□ 0.4
KRT41P-201ENST00000393988 FNBP4Q8N3X1 1017 aaPredicted RBP17.56■□□□□ 0.4
KRT41P-201ENST00000393988 HAP1P54257 671 aaPredicted RBP17.55■□□□□ 0.4
KRT41P-201ENST00000393988 HIRIP3Q9BW71 556 aaPredicted RBP17.55■□□□□ 0.4
KRT41P-201ENST00000393988 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
KRT41P-201ENST00000393988 PSME1Q06323 249 aa17.54■□□□□ 0.4
KRT41P-201ENST00000393988 PMFBP1Q8TBY8 1022 aa17.54■□□□□ 0.4
KRT41P-201ENST00000393988 MINK1Q8N4C8 1332 aaPredicted RBP17.53■□□□□ 0.4
KRT41P-201ENST00000393988 KIF1AQ12756 1690 aa17.53■□□□□ 0.4
KRT41P-201ENST00000393988 CABLES1Q8TDN4 633 aa17.52■□□□□ 0.4
KRT41P-201ENST00000393988 MARF1Q9Y4F3 1742 aaKnown RBP17.5■□□□□ 0.39
KRT41P-201ENST00000393988 ATRNO75882 1429 aa17.5■□□□□ 0.39
KRT41P-201ENST00000393988 BCL9LQ86UU0 1499 aa17.5■□□□□ 0.39
KRT41P-201ENST00000393988 HRCP23327 699 aa17.49■□□□□ 0.39
KRT41P-201ENST00000393988 DLC1Q96QB1 1528 aa17.48■□□□□ 0.39
KRT41P-201ENST00000393988 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
KRT41P-201ENST00000393988 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
KRT41P-201ENST00000393988 GJD4Q96KN9 370 aaPredicted RBP17.47■□□□□ 0.39
KRT41P-201ENST00000393988 ATAD2Q6PL18 1390 aa17.47■□□□□ 0.39
KRT41P-201ENST00000393988 UNC5CLQ8IV45 518 aa17.46■□□□□ 0.39
KRT41P-201ENST00000393988 SBNO1A3KN83 1393 aa17.44■□□□□ 0.38
KRT41P-201ENST00000393988 USP32Q8NFA0 1604 aa17.44■□□□□ 0.38
KRT41P-201ENST00000393988 WASLO00401 505 aaPredicted RBP17.44■□□□□ 0.38
KRT41P-201ENST00000393988 STAC3Q96MF2 364 aa17.44■□□□□ 0.38
KRT41P-201ENST00000393988 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
KRT41P-201ENST00000393988 ANKARQ7Z5J8 1434 aa17.44■□□□□ 0.38
KRT41P-201ENST00000393988 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
KRT41P-201ENST00000393988 NGDNQ8NEJ9 315 aaKnown RBP17.43■□□□□ 0.38
KRT41P-201ENST00000393988 ARHGEF10O15013 1369 aa17.42■□□□□ 0.38
KRT41P-201ENST00000393988 GPRASP1Q5JY77 1395 aa17.42■□□□□ 0.38
KRT41P-201ENST00000393988 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
KRT41P-201ENST00000393988 SLIT2O94813 1529 aa17.42■□□□□ 0.38
KRT41P-201ENST00000393988 ADGRB2O60241 1585 aa17.41■□□□□ 0.38
KRT41P-201ENST00000393988 EIF3AQ14152 1382 aaKnown RBP17.4■□□□□ 0.38
KRT41P-201ENST00000393988 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
KRT41P-201ENST00000393988 FAM83GA6ND36 823 aa17.4■□□□□ 0.38
KRT41P-201ENST00000393988 TULP4Q9NRJ4 1543 aa17.39■□□□□ 0.37
KRT41P-201ENST00000393988 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.38■□□□□ 0.37
KRT41P-201ENST00000393988 NUDT16Q96DE0 195 aaKnown RBP17.38■□□□□ 0.37
KRT41P-201ENST00000393988 GLI3P10071 1580 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 A0A0G2JS52 829 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 MYT1Q01538 1121 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 VPS72Q15906 364 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 NBPF1Q3BBV0 1214 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 SEPT12Q8IYM1 358 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 CDK19Q9BWU1 502 aa17.37■□□□□ 0.37
KRT41P-201ENST00000393988 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
KRT41P-201ENST00000393988 PLCH1Q4KWH8 1693 aa17.36■□□□□ 0.37
KRT41P-201ENST00000393988 ABCA3Q99758 1704 aa17.36■□□□□ 0.37
KRT41P-201ENST00000393988 TRPM3Q9HCF6 1732 aaPredicted RBP17.35■□□□□ 0.37
KRT41P-201ENST00000393988 BTG4Q9NY30 223 aa17.35■□□□□ 0.37
KRT41P-201ENST00000393988 NUTM2GQ5VZR2 741 aa17.34■□□□□ 0.37
KRT41P-201ENST00000393988 BRWD3Q6RI45 1802 aa17.33■□□□□ 0.36
KRT41P-201ENST00000393988 CCDC125Q86Z20 511 aa17.32■□□□□ 0.36
KRT41P-201ENST00000393988 NWD2Q9ULI1 1742 aa17.32■□□□□ 0.36
KRT41P-201ENST00000393988 ALS2Q96Q42 1657 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms