RNA–Protein interactions for RNA: ENST00000393140.5

PRIMA1-202, Transcript of proline rich membrane anchor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIMA1, Length 3,711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIMA1-202ENST00000393140 U2AF1Q01081 240 aaKnown RBP eCLIP15.07■□□□□ 0
PRIMA1-202ENST00000393140 GGNBP2Q9H3C7 697 aa15.07■□□□□ 0
PRIMA1-202ENST00000393140 MRE11P49959 708 aa15.07■□□□□ 0
PRIMA1-202ENST00000393140 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
PRIMA1-202ENST00000393140 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
PRIMA1-202ENST00000393140 CDC42BPBQ9Y5S2 1711 aa15.07■□□□□ 0
PRIMA1-202ENST00000393140 SHANK2Q9UPX8 1470 aa15.07■□□□□ 0
PRIMA1-202ENST00000393140 RALGAPBQ86X10 1494 aa15.06■□□□□ 0
PRIMA1-202ENST00000393140 UGGT1Q9NYU2 1555 aa15.06■□□□□ 0
PRIMA1-202ENST00000393140 CLCN1P35523 988 aa15.05■□□□□ -0
PRIMA1-202ENST00000393140 BRD4O60885 1362 aaPredicted RBP15.05■□□□□ -0
PRIMA1-202ENST00000393140 GOLGA6L22H0YM25 854 aa15.04■□□□□ -0
PRIMA1-202ENST00000393140 DDX49Q9Y6V7 483 aaKnown RBP15.04■□□□□ -0
PRIMA1-202ENST00000393140 BCORL1Q5H9F3 1711 aa15.04■□□□□ -0
PRIMA1-202ENST00000393140 ADGBQ8N7X0 1667 aa15.04■□□□□ -0
PRIMA1-202ENST00000393140 CHMP5Q9NZZ3 219 aa15.04■□□□□ -0
PRIMA1-202ENST00000393140 NOS1P29475 1434 aa15.03■□□□□ -0
PRIMA1-202ENST00000393140 C22orf23Q9BZE7 217 aa15.03■□□□□ -0
PRIMA1-202ENST00000393140 SHROOM2Q13796 1616 aa15.03■□□□□ -0
PRIMA1-202ENST00000393140 PDZRN3Q9UPQ7 1066 aa15.02■□□□□ -0
PRIMA1-202ENST00000393140 DUOX2Q9NRD8 1548 aa15.02■□□□□ -0
PRIMA1-202ENST00000393140 VGFO15240 615 aaPredicted RBP15.02□□□□□ -0.01
PRIMA1-202ENST00000393140 PRAM1Q96QH2 718 aa15.02□□□□□ -0.01
PRIMA1-202ENST00000393140 MTHFSP49914 203 aa15.01□□□□□ -0.01
PRIMA1-202ENST00000393140 WAPLQ7Z5K2 1190 aa15.01□□□□□ -0.01
PRIMA1-202ENST00000393140 EIF3AQ14152 1382 aaKnown RBP15.01□□□□□ -0.01
PRIMA1-202ENST00000393140 TNNQ9UQP3 1299 aa15.01□□□□□ -0.01
PRIMA1-202ENST00000393140 APBB1O00213 710 aa15□□□□□ -0.01
PRIMA1-202ENST00000393140 CEBPAP49715 358 aaPredicted RBP15□□□□□ -0.01
PRIMA1-202ENST00000393140 XPCQ01831 940 aaPredicted RBP15□□□□□ -0.01
PRIMA1-202ENST00000393140 RNF214Q8ND24 703 aa15□□□□□ -0.01
PRIMA1-202ENST00000393140 CARD14Q9BXL6 1004 aa15□□□□□ -0.01
PRIMA1-202ENST00000393140 PREX2Q70Z35 1606 aa15□□□□□ -0.01
PRIMA1-202ENST00000393140 GBP4Q96PP9 640 aa15□□□□□ -0.01
PRIMA1-202ENST00000393140 NASPP49321 788 aaPredicted RBP14.99□□□□□ -0.01
PRIMA1-202ENST00000393140 ITPRIPQ8IWB1 547 aa14.99□□□□□ -0.01
PRIMA1-202ENST00000393140 MYO5CQ9NQX4 1742 aa14.98□□□□□ -0.01
PRIMA1-202ENST00000393140 C14orf37Q86TY3 774 aa14.98□□□□□ -0.01
PRIMA1-202ENST00000393140 UHRF1BP1Q6BDS2 1440 aa14.98□□□□□ -0.01
PRIMA1-202ENST00000393140 DUSP27Q5VZP5 1158 aa14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 SPINK5Q9NQ38 1064 aaPredicted RBP14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 MAPK8IP3Q9UPT6 1336 aa14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 DDX11L8A8MPP1 907 aa14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 NOL8Q76FK4 1167 aaKnown RBP14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 CFAP53Q96M91 514 aa14.97□□□□□ -0.01
PRIMA1-202ENST00000393140 ERBB4Q15303 1308 aa14.96□□□□□ -0.01
PRIMA1-202ENST00000393140 TXNDC2Q86VQ3 553 aa14.96□□□□□ -0.01
PRIMA1-202ENST00000393140 ARHGEF5Q12774 1597 aa14.96□□□□□ -0.01
PRIMA1-202ENST00000393140 RWDD1Q9H446 243 aaPredicted RBP14.96□□□□□ -0.01
PRIMA1-202ENST00000393140 YEATS2Q9ULM3 1422 aa14.95□□□□□ -0.02
PRIMA1-202ENST00000393140 ELL2O00472 640 aaPredicted RBP14.95□□□□□ -0.02
PRIMA1-202ENST00000393140 LNPKQ9C0E8 428 aa14.95□□□□□ -0.02
PRIMA1-202ENST00000393140 TSPOAP1O95153 1857 aa14.95□□□□□ -0.02
PRIMA1-202ENST00000393140 UHRF1BP1LA0JNW5 1464 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 CAVIN1Q6NZI2 390 aaKnown RBP14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 KDM5CP41229 1560 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 IGSF3O75054 1194 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 PDCL3Q9H2J4 239 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 KDM2BQ8NHM5 1336 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 UQCRHLA0A096LP55 91 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 UQCRHP07919 91 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 CABP1Q9NZU7 370 aa14.94□□□□□ -0.02
PRIMA1-202ENST00000393140 MCTP1Q6DN14 999 aa14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 EVC2Q86UK5 1308 aa14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 FAM177BA6PVY3 158 aa14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 CALD1Q05682 793 aaKnown RBP14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 RBM33Q96EV2 1170 aaKnown RBP14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 CROCC2H7BZ55 1655 aa14.93□□□□□ -0.02
PRIMA1-202ENST00000393140 TPM2P07951 284 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 PMFBP1Q8TBY8 1022 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 ATP7AQ04656 1500 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 ATP10AO60312 1499 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 SLC26A8Q96RN1 970 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 NCKAP5LQ9HCH0 1330 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 HMOX1P09601 288 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 DMRT2Q9Y5R5 561 aa14.92□□□□□ -0.02
PRIMA1-202ENST00000393140 GAS2L3Q86XJ1 694 aa14.91□□□□□ -0.02
PRIMA1-202ENST00000393140 CGNL1Q0VF96 1302 aa14.91□□□□□ -0.02
PRIMA1-202ENST00000393140 ABCC1P33527 1531 aa14.91□□□□□ -0.02
PRIMA1-202ENST00000393140 TCP11L2Q8N4U5 519 aa14.91□□□□□ -0.02
PRIMA1-202ENST00000393140 TNPO1Q92973 898 aaKnown RBP14.9□□□□□ -0.02
PRIMA1-202ENST00000393140 PARD3Q8TEW0 1356 aa14.9□□□□□ -0.02
PRIMA1-202ENST00000393140 NSD3Q9BZ95 1437 aa14.9□□□□□ -0.02
PRIMA1-202ENST00000393140 TSC1Q92574 1164 aa14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 PCDHB15Q9Y5E8 787 aa14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 KDM5DQ9BY66 1539 aa14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 CBX1P83916 185 aa14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 C14orf93Q9H972 538 aaKnown RBP14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 SCAF11Q99590 1463 aaKnown RBP14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 TSR2Q969E8 191 aaKnown RBP14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 SMC4Q9NTJ3 1288 aa14.89□□□□□ -0.03
PRIMA1-202ENST00000393140 MAST1Q9Y2H9 1570 aa14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 PLEKHH1Q9ULM0 1364 aa14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 CDK19Q9BWU1 502 aa14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 SLFN5Q08AF3 891 aa14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 TBC1D32Q96NH3 1257 aa14.88□□□□□ -0.03
PRIMA1-202ENST00000393140 HDGFL2Q7Z4V5 671 aaPredicted RBP14.87□□□□□ -0.03
PRIMA1-202ENST00000393140 ZNF518AQ6AHZ1 1483 aa14.87□□□□□ -0.03
PRIMA1-202ENST00000393140 MAGI2Q86UL8 1455 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms