RNA–Protein interactions for RNA: ENST00000392745.6

TRAF3-203, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 2,459 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-203ENST00000392745 SAFB2Q14151 953 aaKnown RBP eCLIP24.35■■□□□ 1.49
TRAF3-203ENST00000392745 YTHDC2Q9H6S0 1430 aaKnown RBP24.33■■□□□ 1.48
TRAF3-203ENST00000392745 TNRQ92752 1358 aa24.32■■□□□ 1.48
TRAF3-203ENST00000392745 SLC12A5Q9H2X9 1139 aa24.32■■□□□ 1.48
TRAF3-203ENST00000392745 TULP4Q9NRJ4 1543 aa24.31■■□□□ 1.48
TRAF3-203ENST00000392745 NPC1L1Q9UHC9 1359 aa24.31■■□□□ 1.48
TRAF3-203ENST00000392745 PTPRMP28827 1452 aa24.31■■□□□ 1.48
TRAF3-203ENST00000392745 EVC2Q86UK5 1308 aa24.3■■□□□ 1.48
TRAF3-203ENST00000392745 PPP2R1AP30153 589 aa24.3■■□□□ 1.48
TRAF3-203ENST00000392745 CEBPAP49715 358 aaPredicted RBP24.29■■□□□ 1.48
TRAF3-203ENST00000392745 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
TRAF3-203ENST00000392745 SETD1AO15047 1707 aaKnown RBP24.27■■□□□ 1.48
TRAF3-203ENST00000392745 RTL5Q5HYW3 569 aaPredicted RBP24.26■■□□□ 1.47
TRAF3-203ENST00000392745 PUS7Q96PZ0 661 aaKnown RBP24.26■■□□□ 1.47
TRAF3-203ENST00000392745 CABP2Q9NPB3 220 aa24.26■■□□□ 1.47
TRAF3-203ENST00000392745 UBR1Q8IWV7 1749 aa24.24■■□□□ 1.47
TRAF3-203ENST00000392745 EXOC6Q8TAG9 804 aa24.24■■□□□ 1.47
TRAF3-203ENST00000392745 NRXN3Q9Y4C0 1643 aa24.24■■□□□ 1.47
TRAF3-203ENST00000392745 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.24■■□□□ 1.47
TRAF3-203ENST00000392745 POGKQ9P215 609 aa24.24■■□□□ 1.47
TRAF3-203ENST00000392745 RRP1P56182 461 aaKnown RBP24.23■■□□□ 1.47
TRAF3-203ENST00000392745 NPM2Q86SE8 214 aaKnown RBP24.23■■□□□ 1.47
TRAF3-203ENST00000392745 MINK1Q8N4C8 1332 aaPredicted RBP24.23■■□□□ 1.47
TRAF3-203ENST00000392745 NSD3Q9BZ95 1437 aa24.21■■□□□ 1.47
TRAF3-203ENST00000392745 C3P01024 1663 aa24.2■■□□□ 1.46
TRAF3-203ENST00000392745 TMEM2Q9UHN6 1383 aa24.2■■□□□ 1.46
TRAF3-203ENST00000392745 SALL2Q9Y467 1007 aaPredicted RBP24.19■■□□□ 1.46
TRAF3-203ENST00000392745 METP08581 1390 aa24.19■■□□□ 1.46
TRAF3-203ENST00000392745 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
TRAF3-203ENST00000392745 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
TRAF3-203ENST00000392745 SRPK2P78362 688 aaKnown RBP24.18■■□□□ 1.46
TRAF3-203ENST00000392745 PLPPR3Q6T4P5 718 aa24.18■■□□□ 1.46
TRAF3-203ENST00000392745 WAPLQ7Z5K2 1190 aa24.18■■□□□ 1.46
TRAF3-203ENST00000392745 RCAN3Q9UKA8 241 aa24.16■■□□□ 1.46
TRAF3-203ENST00000392745 ADAMTS8Q9UP79 889 aa24.16■■□□□ 1.46
TRAF3-203ENST00000392745 ABCC11Q96J66 1382 aa24.15■■□□□ 1.46
TRAF3-203ENST00000392745 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
TRAF3-203ENST00000392745 DLC1Q96QB1 1528 aa24.15■■□□□ 1.46
TRAF3-203ENST00000392745 ANKRD36BQ8N2N9 1353 aa24.15■■□□□ 1.46
TRAF3-203ENST00000392745 NLRP1Q9C000 1473 aa24.14■■□□□ 1.46
TRAF3-203ENST00000392745 TCERG1O14776 1098 aaKnown RBP24.14■■□□□ 1.45
TRAF3-203ENST00000392745 PDE4AP27815 886 aa24.13■■□□□ 1.45
TRAF3-203ENST00000392745 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
TRAF3-203ENST00000392745 LTKP29376 864 aa24.13■■□□□ 1.45
TRAF3-203ENST00000392745 CDK19Q9BWU1 502 aa24.13■■□□□ 1.45
TRAF3-203ENST00000392745 BLMP54132 1417 aaPredicted RBP24.13■■□□□ 1.45
TRAF3-203ENST00000392745 INSRP06213 1382 aa24.13■■□□□ 1.45
TRAF3-203ENST00000392745 LAS1LQ9Y4W2 734 aaKnown RBP24.1■■□□□ 1.45
TRAF3-203ENST00000392745 USP32Q8NFA0 1604 aa24.1■■□□□ 1.45
TRAF3-203ENST00000392745 ATAD2Q6PL18 1390 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 CGNL1Q0VF96 1302 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 A0A1W2PP64 1363 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 MORC1Q86VD1 984 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 BACH2Q9BYV9 841 aa24.09■■□□□ 1.45
TRAF3-203ENST00000392745 NINLQ9Y2I6 1382 aa24.08■■□□□ 1.45
TRAF3-203ENST00000392745 ADAMTS13Q76LX8 1427 aa24.07■■□□□ 1.44
TRAF3-203ENST00000392745 WDR43Q15061 677 aaKnown RBP eCLIP24.07■■□□□ 1.44
TRAF3-203ENST00000392745 TNNT2P45379 298 aaPredicted RBP24.07■■□□□ 1.44
TRAF3-203ENST00000392745 CD163L1Q9NR16 1453 aa24.06■■□□□ 1.44
TRAF3-203ENST00000392745 CDCA7LQ96GN5 454 aa24.06■■□□□ 1.44
TRAF3-203ENST00000392745 PLEKHG1Q9ULL1 1385 aa24.04■■□□□ 1.44
TRAF3-203ENST00000392745 NEFMP07197 916 aa24.04■■□□□ 1.44
TRAF3-203ENST00000392745 CABP1Q9NZU7 370 aa24.04■■□□□ 1.44
TRAF3-203ENST00000392745 IL27Q8NEV9 243 aa24.03■■□□□ 1.44
TRAF3-203ENST00000392745 KNDC1Q76NI1 1749 aa24.03■■□□□ 1.44
TRAF3-203ENST00000392745 TECPR2O15040 1411 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 PLIN1O60240 522 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 MS4A1P11836 297 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 PDE3BQ13370 1112 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 SIRT1Q96EB6 747 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 TERF2IPQ9NYB0 399 aa24.02■■□□□ 1.44
TRAF3-203ENST00000392745 SKAP1Q86WV1 359 aa24.01■■□□□ 1.43
TRAF3-203ENST00000392745 SLIT1O75093 1534 aa24.01■■□□□ 1.43
TRAF3-203ENST00000392745 ARHGAP23Q9P227 1491 aa24.01■■□□□ 1.43
TRAF3-203ENST00000392745 POLR3AO14802 1390 aaPredicted RBP24■■□□□ 1.43
TRAF3-203ENST00000392745 EID1Q9Y6B2 187 aa24■■□□□ 1.43
TRAF3-203ENST00000392745 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
TRAF3-203ENST00000392745 SLC26A8Q96RN1 970 aa24■■□□□ 1.43
TRAF3-203ENST00000392745 NSD2O96028 1365 aa23.99■■□□□ 1.43
TRAF3-203ENST00000392745 WASLO00401 505 aaPredicted RBP23.99■■□□□ 1.43
TRAF3-203ENST00000392745 MED14O60244 1454 aa23.98■■□□□ 1.43
TRAF3-203ENST00000392745 CPS1P31327 1500 aa23.98■■□□□ 1.43
TRAF3-203ENST00000392745 THEMISQ8N1K5 641 aaPredicted RBP23.98■■□□□ 1.43
TRAF3-203ENST00000392745 ROBO2Q9HCK4 1378 aa23.98■■□□□ 1.43
TRAF3-203ENST00000392745 FYB1O15117 783 aa23.96■■□□□ 1.43
TRAF3-203ENST00000392745 MTHFSP49914 203 aa23.96■■□□□ 1.43
TRAF3-203ENST00000392745 GGNBP2Q9H3C7 697 aa23.96■■□□□ 1.43
TRAF3-203ENST00000392745 RIMS1Q86UR5 1692 aaKnown RBP23.96■■□□□ 1.43
TRAF3-203ENST00000392745 CCDC146Q8IYE0 955 aa23.96■■□□□ 1.43
TRAF3-203ENST00000392745 HDGFL2Q7Z4V5 671 aaPredicted RBP23.95■■□□□ 1.43
TRAF3-203ENST00000392745 ANO8Q9HCE9 1232 aaPredicted RBP23.95■■□□□ 1.42
TRAF3-203ENST00000392745 USP35Q9P2H5 1018 aa23.95■■□□□ 1.42
TRAF3-203ENST00000392745 CRBNQ96SW2 442 aa23.94■■□□□ 1.42
TRAF3-203ENST00000392745 PTPRUQ92729 1446 aa23.94■■□□□ 1.42
TRAF3-203ENST00000392745 RTN4Q9NQC3 1192 aaKnown RBP23.93■■□□□ 1.42
TRAF3-203ENST00000392745 SHPRHQ149N8 1683 aa23.92■■□□□ 1.42
TRAF3-203ENST00000392745 NCKAP5LQ9HCH0 1330 aa23.91■■□□□ 1.42
TRAF3-203ENST00000392745 NUDT16Q96DE0 195 aaKnown RBP23.9■■□□□ 1.42
TRAF3-203ENST00000392745 PPM1GO15355 546 aaPredicted RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms