RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 LMTK3Q96Q04 1460 aa26.79■■□□□ 1.88
CSNK1D-203ENST00000392334 FAM9BQ8IZU0 186 aa26.78■■□□□ 1.88
CSNK1D-203ENST00000392334 PER1O15534 1290 aaPredicted RBP26.77■■□□□ 1.88
CSNK1D-203ENST00000392334 IRX6P78412 446 aaPredicted RBP26.77■■□□□ 1.88
CSNK1D-203ENST00000392334 PRAM1Q96QH2 718 aa26.77■■□□□ 1.88
CSNK1D-203ENST00000392334 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
CSNK1D-203ENST00000392334 POGKQ9P215 609 aa26.75■■□□□ 1.87
CSNK1D-203ENST00000392334 SLC24A1O60721 1099 aa26.74■■□□□ 1.87
CSNK1D-203ENST00000392334 LRPPRCP42704 1394 aaKnown RBP26.74■■□□□ 1.87
CSNK1D-203ENST00000392334 QRICH2Q9H0J4 1663 aa26.74■■□□□ 1.87
CSNK1D-203ENST00000392334 SBNO2Q9Y2G9 1366 aa26.73■■□□□ 1.87
CSNK1D-203ENST00000392334 CC2D1BQ5T0F9 858 aaKnown RBP26.73■■□□□ 1.87
CSNK1D-203ENST00000392334 PTPRUQ92729 1446 aa26.72■■□□□ 1.87
CSNK1D-203ENST00000392334 WAPLQ7Z5K2 1190 aa26.72■■□□□ 1.87
CSNK1D-203ENST00000392334 NPHP4O75161 1426 aaPredicted RBP26.71■■□□□ 1.87
CSNK1D-203ENST00000392334 ABCC11Q96J66 1382 aa26.71■■□□□ 1.87
CSNK1D-203ENST00000392334 MINK1Q8N4C8 1332 aaPredicted RBP26.71■■□□□ 1.87
CSNK1D-203ENST00000392334 SMG6Q86US8 1419 aaKnown RBP26.7■■□□□ 1.86
CSNK1D-203ENST00000392334 TMC1Q8TDI8 760 aa26.7■■□□□ 1.86
CSNK1D-203ENST00000392334 PLEKHH1Q9ULM0 1364 aa26.69■■□□□ 1.86
CSNK1D-203ENST00000392334 CABP2Q9NPB3 220 aa26.68■■□□□ 1.86
CSNK1D-203ENST00000392334 DIP2AQ14689 1571 aa26.68■■□□□ 1.86
CSNK1D-203ENST00000392334 MSH5O43196 834 aa26.67■■□□□ 1.86
CSNK1D-203ENST00000392334 AMOTL2Q9Y2J4 779 aa26.67■■□□□ 1.86
CSNK1D-203ENST00000392334 EVC2Q86UK5 1308 aa26.66■■□□□ 1.86
CSNK1D-203ENST00000392334 SLC12A5Q9H2X9 1139 aa26.65■■□□□ 1.86
CSNK1D-203ENST00000392334 KNSTRNQ9Y448 316 aa26.65■■□□□ 1.86
CSNK1D-203ENST00000392334 DLC1Q96QB1 1528 aa26.65■■□□□ 1.86
CSNK1D-203ENST00000392334 ROBO2Q9HCK4 1378 aa26.65■■□□□ 1.86
CSNK1D-203ENST00000392334 KNDC1Q76NI1 1749 aa26.64■■□□□ 1.86
CSNK1D-203ENST00000392334 TECPR2O15040 1411 aa26.64■■□□□ 1.85
CSNK1D-203ENST00000392334 KTN1Q86UP2 1357 aaKnown RBP26.63■■□□□ 1.85
CSNK1D-203ENST00000392334 MYOM1P52179 1685 aa26.63■■□□□ 1.85
CSNK1D-203ENST00000392334 SRPK2P78362 688 aaKnown RBP26.63■■□□□ 1.85
CSNK1D-203ENST00000392334 TULP4Q9NRJ4 1543 aa26.62■■□□□ 1.85
CSNK1D-203ENST00000392334 STRCQ7RTU9 1775 aa26.62■■□□□ 1.85
CSNK1D-203ENST00000392334 CPS1P31327 1500 aa26.62■■□□□ 1.85
CSNK1D-203ENST00000392334 RALBP1Q15311 655 aa26.61■■□□□ 1.85
CSNK1D-203ENST00000392334 KCNA6P17658 529 aa26.6■■□□□ 1.85
CSNK1D-203ENST00000392334 CARD14Q9BXL6 1004 aa26.6■■□□□ 1.85
CSNK1D-203ENST00000392334 RNF123Q5XPI4 1314 aa26.59■■□□□ 1.85
CSNK1D-203ENST00000392334 CHD2O14647 1828 aaKnown RBP26.59■■□□□ 1.85
CSNK1D-203ENST00000392334 PIK3R4Q99570 1358 aa26.58■■□□□ 1.84
CSNK1D-203ENST00000392334 FAM135BQ49AJ0 1406 aa26.57■■□□□ 1.84
CSNK1D-203ENST00000392334 XRN1Q8IZH2 1706 aaKnown RBP26.57■■□□□ 1.84
CSNK1D-203ENST00000392334 MYBBP1AQ9BQG0 1328 aaKnown RBP26.57■■□□□ 1.84
CSNK1D-203ENST00000392334 AMER1Q5JTC6 1135 aaPredicted RBP26.56■■□□□ 1.84
CSNK1D-203ENST00000392334 SIRT1Q96EB6 747 aa26.56■■□□□ 1.84
CSNK1D-203ENST00000392334 PARD3Q8TEW0 1356 aa26.56■■□□□ 1.84
CSNK1D-203ENST00000392334 CDK19Q9BWU1 502 aa26.56■■□□□ 1.84
CSNK1D-203ENST00000392334 NUDCQ9Y266 331 aa26.56■■□□□ 1.84
CSNK1D-203ENST00000392334 RBM33Q96EV2 1170 aaKnown RBP26.53■■□□□ 1.84
CSNK1D-203ENST00000392334 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.52■■□□□ 1.84
CSNK1D-203ENST00000392334 PTCH1Q13635 1447 aa26.52■■□□□ 1.84
CSNK1D-203ENST00000392334 B4GALNT3Q6L9W6 998 aa26.51■■□□□ 1.83
CSNK1D-203ENST00000392334 PNISRQ8TF01 805 aaKnown RBP26.49■■□□□ 1.83
CSNK1D-203ENST00000392334 PUS7Q96PZ0 661 aaKnown RBP26.48■■□□□ 1.83
CSNK1D-203ENST00000392334 NLRP13Q86W25 1043 aa26.47■■□□□ 1.83
CSNK1D-203ENST00000392334 NSD3Q9BZ95 1437 aa26.47■■□□□ 1.83
CSNK1D-203ENST00000392334 BRD4O60885 1362 aaPredicted RBP26.45■■□□□ 1.83
CSNK1D-203ENST00000392334 SENP3-EIF4A1A0A087X0R7 540 aa26.44■■□□□ 1.82
CSNK1D-203ENST00000392334 WASLO00401 505 aaPredicted RBP26.44■■□□□ 1.82
CSNK1D-203ENST00000392334 STRCP1A6NGW2 1772 aa26.44■■□□□ 1.82
CSNK1D-203ENST00000392334 CABP1Q9NZU7 370 aa26.44■■□□□ 1.82
CSNK1D-203ENST00000392334 ATAD2Q6PL18 1390 aa26.42■■□□□ 1.82
CSNK1D-203ENST00000392334 NWD1Q149M9 1564 aa26.42■■□□□ 1.82
CSNK1D-203ENST00000392334 NUTM2FA1L443 756 aa26.41■■□□□ 1.82
CSNK1D-203ENST00000392334 PPP2R1AP30153 589 aa26.41■■□□□ 1.82
CSNK1D-203ENST00000392334 ANKRD36BQ8N2N9 1353 aa26.4■■□□□ 1.82
CSNK1D-203ENST00000392334 A0A1W2PP64 1363 aa26.4■■□□□ 1.82
CSNK1D-203ENST00000392334 ERICH6Q7L0X2 663 aa26.39■■□□□ 1.82
CSNK1D-203ENST00000392334 TNNT2P45379 298 aaPredicted RBP26.39■■□□□ 1.81
CSNK1D-203ENST00000392334 ADGRB2O60241 1585 aa26.38■■□□□ 1.81
CSNK1D-203ENST00000392334 PROSER2Q86WR7 435 aaPredicted RBP26.38■■□□□ 1.81
CSNK1D-203ENST00000392334 NALCNQ8IZF0 1738 aa26.37■■□□□ 1.81
CSNK1D-203ENST00000392334 NPC1L1Q9UHC9 1359 aa26.37■■□□□ 1.81
CSNK1D-203ENST00000392334 ZNF335Q9H4Z2 1342 aaPredicted RBP26.36■■□□□ 1.81
CSNK1D-203ENST00000392334 TERF2IPQ9NYB0 399 aa26.35■■□□□ 1.81
CSNK1D-203ENST00000392334 NUDT16Q96DE0 195 aaKnown RBP26.34■■□□□ 1.81
CSNK1D-203ENST00000392334 PRR36Q9H6K5 1346 aa26.34■■□□□ 1.81
CSNK1D-203ENST00000392334 CGNL1Q0VF96 1302 aa26.34■■□□□ 1.81
CSNK1D-203ENST00000392334 C14orf37Q86TY3 774 aa26.33■■□□□ 1.81
CSNK1D-203ENST00000392334 MORC1Q86VD1 984 aa26.33■■□□□ 1.81
CSNK1D-203ENST00000392334 NINLQ9Y2I6 1382 aa26.33■■□□□ 1.81
CSNK1D-203ENST00000392334 NKTRP30414 1462 aaKnown RBP26.33■■□□□ 1.8
CSNK1D-203ENST00000392334 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
CSNK1D-203ENST00000392334 HDGFL2Q7Z4V5 671 aaPredicted RBP26.32■■□□□ 1.8
CSNK1D-203ENST00000392334 ATP7BP35670 1465 aa26.3■■□□□ 1.8
CSNK1D-203ENST00000392334 DMRT2Q9Y5R5 561 aa26.3■■□□□ 1.8
CSNK1D-203ENST00000392334 RGPD8O14715 1765 aaPredicted RBP26.29■■□□□ 1.8
CSNK1D-203ENST00000392334 GGNBP2Q9H3C7 697 aa26.29■■□□□ 1.8
CSNK1D-203ENST00000392334 PPIP5K1Q6PFW1 1433 aa26.29■■□□□ 1.8
CSNK1D-203ENST00000392334 ADGRL3Q9HAR2 1447 aa26.29■■□□□ 1.8
CSNK1D-203ENST00000392334 TMEM94Q12767 1356 aa26.28■■□□□ 1.8
CSNK1D-203ENST00000392334 AEBP2Q6ZN18 517 aaPredicted RBP26.28■■□□□ 1.8
CSNK1D-203ENST00000392334 CCDC136Q96JN2 1154 aa26.28■■□□□ 1.8
CSNK1D-203ENST00000392334 CCDC61Q9Y6R9 512 aa26.28■■□□□ 1.8
CSNK1D-203ENST00000392334 USP32Q8NFA0 1604 aa26.28■■□□□ 1.8
CSNK1D-203ENST00000392334 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.27■■□□□ 1.82e-7■■□□□ 13.2
CSNK1D-203ENST00000392334 INSRP06213 1382 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms