RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 L1TD1Q5T7N2 865 aaKnown RBP18.42■□□□□ 0.54
LRRFIP1-204ENST00000392000 C22orf23Q9BZE7 217 aa18.42■□□□□ 0.54
LRRFIP1-204ENST00000392000 RSPH6AQ9H0K4 717 aa18.41■□□□□ 0.54
LRRFIP1-204ENST00000392000 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
LRRFIP1-204ENST00000392000 NCLP19338 710 aaKnown RBP18.41■□□□□ 0.54
LRRFIP1-204ENST00000392000 PDE3AQ14432 1141 aa18.41■□□□□ 0.54
LRRFIP1-204ENST00000392000 CFAP53Q96M91 514 aa18.41■□□□□ 0.54
LRRFIP1-204ENST00000392000 TRAK2O60296 914 aa18.4■□□□□ 0.54
LRRFIP1-204ENST00000392000 EXOSC9Q06265 439 aaKnown RBP18.4■□□□□ 0.54
LRRFIP1-204ENST00000392000 HSCBQ8IWL3 235 aa18.4■□□□□ 0.54
LRRFIP1-204ENST00000392000 APBB1O00213 710 aa18.39■□□□□ 0.54
LRRFIP1-204ENST00000392000 NOS1P29475 1434 aa18.39■□□□□ 0.53
LRRFIP1-204ENST00000392000 MINK1Q8N4C8 1332 aaPredicted RBP18.39■□□□□ 0.53
LRRFIP1-204ENST00000392000 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
LRRFIP1-204ENST00000392000 C1orf115Q9H7X2 142 aa18.39■□□□□ 0.53
LRRFIP1-204ENST00000392000 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
LRRFIP1-204ENST00000392000 MCM4P33991 863 aa18.38■□□□□ 0.53
LRRFIP1-204ENST00000392000 TRIM44Q96DX7 344 aaPredicted RBP18.38■□□□□ 0.53
LRRFIP1-204ENST00000392000 PIK3C2GO75747 1445 aa18.36■□□□□ 0.53
LRRFIP1-204ENST00000392000 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
LRRFIP1-204ENST00000392000 DZIP1LQ8IYY4 767 aaKnown RBP18.36■□□□□ 0.53
LRRFIP1-204ENST00000392000 TBC1D32Q96NH3 1257 aa18.36■□□□□ 0.53
LRRFIP1-204ENST00000392000 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
LRRFIP1-204ENST00000392000 RAPGEF3O95398 923 aa18.35■□□□□ 0.53
LRRFIP1-204ENST00000392000 UNC13BO14795 1591 aa18.35■□□□□ 0.53
LRRFIP1-204ENST00000392000 ERVK-7P63135 1459 aa18.35■□□□□ 0.53
LRRFIP1-204ENST00000392000 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
LRRFIP1-204ENST00000392000 MYH16Q9H6N6 1097 aa18.35■□□□□ 0.53
LRRFIP1-204ENST00000392000 EIF2AK4Q9P2K8 1649 aaKnown RBP18.34■□□□□ 0.53
LRRFIP1-204ENST00000392000 IQGAP3Q86VI3 1631 aa18.34■□□□□ 0.53
LRRFIP1-204ENST00000392000 THUMPD2Q9BTF0 503 aaKnown RBP18.34■□□□□ 0.53
LRRFIP1-204ENST00000392000 FOXD4L5Q5VV16 416 aaPredicted RBP18.32■□□□□ 0.52
LRRFIP1-204ENST00000392000 FOXD4L4Q8WXT5 416 aaPredicted RBP18.32■□□□□ 0.52
LRRFIP1-204ENST00000392000 SSH1Q8WYL5 1049 aa18.32■□□□□ 0.52
LRRFIP1-204ENST00000392000 ABCC2Q92887 1545 aa18.32■□□□□ 0.52
LRRFIP1-204ENST00000392000 INSRP06213 1382 aa18.31■□□□□ 0.52
LRRFIP1-204ENST00000392000 CHMP5Q9NZZ3 219 aa18.31■□□□□ 0.52
LRRFIP1-204ENST00000392000 CLTCL1P53675 1640 aa18.31■□□□□ 0.52
LRRFIP1-204ENST00000392000 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
LRRFIP1-204ENST00000392000 HMOX1P09601 288 aa18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 ANKRD45Q5TZF3 282 aa18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 UBE2Q2Q8WVN8 375 aa18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 MADDQ8WXG6 1647 aa18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 RIPK4P57078 832 aa18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 MVPQ14764 893 aaKnown RBP18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
LRRFIP1-204ENST00000392000 FANCAO15360 1455 aa18.29■□□□□ 0.52
LRRFIP1-204ENST00000392000 NPM1P06748 294 aaKnown RBP eCLIP18.29■□□□□ 0.52
LRRFIP1-204ENST00000392000 TRIM27P14373 513 aa18.29■□□□□ 0.52
LRRFIP1-204ENST00000392000 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
LRRFIP1-204ENST00000392000 CHD1O14646 1710 aa18.29■□□□□ 0.52
LRRFIP1-204ENST00000392000 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.52
LRRFIP1-204ENST00000392000 STAG3Q9UJ98 1225 aa18.27■□□□□ 0.51
LRRFIP1-204ENST00000392000 HSP90AA2PQ14568 343 aaPredicted RBP18.26■□□□□ 0.51
LRRFIP1-204ENST00000392000 ADGRL1O94910 1474 aa18.26■□□□□ 0.51
LRRFIP1-204ENST00000392000 C14orf93Q9H972 538 aaKnown RBP18.26■□□□□ 0.51
LRRFIP1-204ENST00000392000 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
LRRFIP1-204ENST00000392000 TMPOP42166 694 aaKnown RBP18.25■□□□□ 0.51
LRRFIP1-204ENST00000392000 POLR3AO14802 1390 aaPredicted RBP18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 GRPEL1Q9HAV7 217 aa18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 PTPRTO14522 1441 aa18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 FOXD4L6Q3SYB3 417 aaPredicted RBP18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 FOXD4L3Q6VB84 417 aaPredicted RBP18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 WDR63Q8IWG1 891 aa18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 SOX12O15370 315 aa18.24■□□□□ 0.51
LRRFIP1-204ENST00000392000 ABCC1P33527 1531 aa18.23■□□□□ 0.51
LRRFIP1-204ENST00000392000 STAC3Q96MF2 364 aa18.23■□□□□ 0.51
LRRFIP1-204ENST00000392000 PRAM1Q96QH2 718 aa18.23■□□□□ 0.51
LRRFIP1-204ENST00000392000 SYNMO15061 1565 aa18.23■□□□□ 0.51
LRRFIP1-204ENST00000392000 PLXNC1O60486 1568 aa18.23■□□□□ 0.51
LRRFIP1-204ENST00000392000 IDI1Q13907 227 aa18.22■□□□□ 0.51
LRRFIP1-204ENST00000392000 MLECQ14165 292 aa18.22■□□□□ 0.51
LRRFIP1-204ENST00000392000 NPC1L1Q9UHC9 1359 aa18.22■□□□□ 0.51
LRRFIP1-204ENST00000392000 TRPM2O94759 1503 aa18.21■□□□□ 0.51
LRRFIP1-204ENST00000392000 TNPO1Q92973 898 aaKnown RBP18.21■□□□□ 0.51
LRRFIP1-204ENST00000392000 NUTM2FA1L443 756 aa18.21■□□□□ 0.51
LRRFIP1-204ENST00000392000 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
LRRFIP1-204ENST00000392000 CABP1Q9NZU7 370 aa18.21■□□□□ 0.5
LRRFIP1-204ENST00000392000 SLC24A1O60721 1099 aa18.2■□□□□ 0.5
LRRFIP1-204ENST00000392000 MPNDQ8N594 471 aa18.2■□□□□ 0.5
LRRFIP1-204ENST00000392000 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
LRRFIP1-204ENST00000392000 ZCCHC11Q5TAX3 1644 aaKnown RBP18.19■□□□□ 0.5
LRRFIP1-204ENST00000392000 FBXO31Q5XUX0 539 aaPredicted RBP18.19■□□□□ 0.5
LRRFIP1-204ENST00000392000 ATF7IPQ6VMQ6 1270 aa18.19■□□□□ 0.5
LRRFIP1-204ENST00000392000 GAS2L3Q86XJ1 694 aa18.19■□□□□ 0.5
LRRFIP1-204ENST00000392000 DDX49Q9Y6V7 483 aaKnown RBP18.19■□□□□ 0.5
LRRFIP1-204ENST00000392000 IQGAP1P46940 1657 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 ESPNB1AK53 854 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 MRE11P49959 708 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 GLIPR1L2Q4G1C9 344 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 KDM5AP29375 1690 aaKnown RBP18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 PRKAR2BP31323 418 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 WAPLQ7Z5K2 1190 aa18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 ANP32BQ92688 251 aaKnown RBP18.18■□□□□ 0.5
LRRFIP1-204ENST00000392000 FYB1O15117 783 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 LAMC1P11047 1609 aa18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 RNF17Q9BXT8 1623 aaKnown RBP18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 VGFO15240 615 aaPredicted RBP18.17■□□□□ 0.5
LRRFIP1-204ENST00000392000 CD2BP2O95400 341 aaKnown RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms