RNA–Protein interactions for RNA: ENST00000391303.1

RNU1-56P-201, Transcript of RNA, U1 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU1-56P, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-56P-201ENST00000391303 STK26Q9P289 416 aa10.33□□□□□ -0.76
RNU1-56P-201ENST00000391303 SHPRHQ149N8 1683 aa10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 CDK12Q9NYV4 1490 aaPredicted RBP10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 RXRBP28702 533 aa10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 ESCO1Q5FWF5 840 aa10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 TMEM132EQ6IEE7 984 aa10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 SETD1AO15047 1707 aaKnown RBP10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 LAMC1P11047 1609 aa10.32□□□□□ -0.76
RNU1-56P-201ENST00000391303 PPLO60437 1756 aa10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 NUTM2BA6NNL0 878 aaPredicted RBP10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 NUTM2EB1AL46 878 aaPredicted RBP10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 CFAP70Q5T0N1 1121 aa10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 WAPLQ7Z5K2 1190 aa10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 NUTM2AQ8IVF1 878 aaPredicted RBP10.31□□□□□ -0.76
RNU1-56P-201ENST00000391303 EIF3AQ14152 1382 aaKnown RBP10.3□□□□□ -0.76
RNU1-56P-201ENST00000391303 NHSL1Q5SYE7 1610 aa10.3□□□□□ -0.76
RNU1-56P-201ENST00000391303 AFF2P51816 1311 aa10.3□□□□□ -0.76
RNU1-56P-201ENST00000391303 NALCNQ8IZF0 1738 aa10.3□□□□□ -0.76
RNU1-56P-201ENST00000391303 DLC1Q96QB1 1528 aa10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 FOXO3O43524 673 aa10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 RBM6P78332 1123 aaKnown RBP10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 FNBP4Q8N3X1 1017 aaPredicted RBP10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 DDX17Q92841 729 aaKnown RBP10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 NGLY1Q96IV0 654 aa10.29□□□□□ -0.76
RNU1-56P-201ENST00000391303 PLEKHH1Q9ULM0 1364 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 ANKARQ7Z5J8 1434 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 PSME1Q06323 249 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 DCAF11Q8TEB1 546 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 C8orf37Q96NL8 207 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 PRAM1Q96QH2 718 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 POGKQ9P215 609 aa10.28□□□□□ -0.76
RNU1-56P-201ENST00000391303 QTRT2Q9H974 415 aaKnown RBP10.27□□□□□ -0.77
RNU1-56P-201ENST00000391303 PHF8Q9UPP1 1060 aa10.27□□□□□ -0.77
RNU1-56P-201ENST00000391303 PXDNQ92626 1479 aa10.27□□□□□ -0.77
RNU1-56P-201ENST00000391303 SPATA31A3Q5VYP0 1347 aa10.27□□□□□ -0.77
RNU1-56P-201ENST00000391303 TRPC5Q9UL62 973 aaPredicted RBP10.26□□□□□ -0.77
RNU1-56P-201ENST00000391303 SBNO1A3KN83 1393 aa10.26□□□□□ -0.77
RNU1-56P-201ENST00000391303 KNDC1Q76NI1 1749 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 IFT172Q9UG01 1749 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 ADAMTS2O95450 1211 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 KRT28Q7Z3Y7 464 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 USP21Q9UK80 565 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 ADGRB1O14514 1584 aa10.25□□□□□ -0.77
RNU1-56P-201ENST00000391303 ARHGEF10O15013 1369 aa10.24□□□□□ -0.77
RNU1-56P-201ENST00000391303 TRAK1Q9UPV9 953 aa10.23□□□□□ -0.77
RNU1-56P-201ENST00000391303 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
RNU1-56P-201ENST00000391303 COL22A1Q8NFW1 1626 aaPredicted RBP10.22□□□□□ -0.77
RNU1-56P-201ENST00000391303 NUTM2FA1L443 756 aa10.22□□□□□ -0.77
RNU1-56P-201ENST00000391303 WASLO00401 505 aaPredicted RBP10.22□□□□□ -0.77
RNU1-56P-201ENST00000391303 UPF1Q92900 1129 aaKnown RBP eCLIP10.22□□□□□ -0.77
RNU1-56P-201ENST00000391303 TNS3Q68CZ2 1445 aa10.22□□□□□ -0.77
RNU1-56P-201ENST00000391303 GPRASP1Q5JY77 1395 aa10.21□□□□□ -0.78
RNU1-56P-201ENST00000391303 ATRNO75882 1429 aa10.21□□□□□ -0.78
RNU1-56P-201ENST00000391303 ADGRB2O60241 1585 aa10.21□□□□□ -0.78
RNU1-56P-201ENST00000391303 KIF1AQ12756 1690 aa10.21□□□□□ -0.78
RNU1-56P-201ENST00000391303 XPCQ01831 940 aaPredicted RBP10.2□□□□□ -0.78
RNU1-56P-201ENST00000391303 SAFB2Q14151 953 aaKnown RBP eCLIP10.2□□□□□ -0.78
RNU1-56P-201ENST00000391303 UNC5CLQ8IV45 518 aa10.2□□□□□ -0.78
RNU1-56P-201ENST00000391303 BCL9LQ86UU0 1499 aa10.19□□□□□ -0.78
RNU1-56P-201ENST00000391303 CCDC125Q86Z20 511 aa10.19□□□□□ -0.78
RNU1-56P-201ENST00000391303 GJD4Q96KN9 370 aaPredicted RBP10.19□□□□□ -0.78
RNU1-56P-201ENST00000391303 FMN2Q9NZ56 1722 aa10.19□□□□□ -0.78
RNU1-56P-201ENST00000391303 TULP4Q9NRJ4 1543 aa10.18□□□□□ -0.78
RNU1-56P-201ENST00000391303 RGS12O14924 1447 aa10.18□□□□□ -0.78
RNU1-56P-201ENST00000391303 ATAD2Q6PL18 1390 aa10.18□□□□□ -0.78
RNU1-56P-201ENST00000391303 HAP1P54257 671 aaPredicted RBP10.18□□□□□ -0.78
RNU1-56P-201ENST00000391303 SLIT2O94813 1529 aa10.17□□□□□ -0.78
RNU1-56P-201ENST00000391303 MINK1Q8N4C8 1332 aaPredicted RBP10.17□□□□□ -0.78
RNU1-56P-201ENST00000391303 NGDNQ8NEJ9 315 aaKnown RBP10.17□□□□□ -0.78
RNU1-56P-201ENST00000391303 CCDC61Q9Y6R9 512 aa10.17□□□□□ -0.78
RNU1-56P-201ENST00000391303 BRD4O60885 1362 aaPredicted RBP10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 PRR36Q9H6K5 1346 aa10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 VPS72Q15906 364 aa10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 PMFBP1Q8TBY8 1022 aa10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 NUDT16Q96DE0 195 aaKnown RBP10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 HIRIP3Q9BW71 556 aaPredicted RBP10.16□□□□□ -0.78
RNU1-56P-201ENST00000391303 PLEKHG3A1L390 1219 aa10.15□□□□□ -0.78
RNU1-56P-201ENST00000391303 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
RNU1-56P-201ENST00000391303 POLR3AO14802 1390 aaPredicted RBP10.14□□□□□ -0.79
RNU1-56P-201ENST00000391303 LMOD2Q6P5Q4 547 aa10.14□□□□□ -0.79
RNU1-56P-201ENST00000391303 CDK19Q9BWU1 502 aa10.14□□□□□ -0.79
RNU1-56P-201ENST00000391303 CENPJQ9HC77 1338 aaPredicted RBP10.13□□□□□ -0.79
RNU1-56P-201ENST00000391303 ATP7BP35670 1465 aa10.13□□□□□ -0.79
RNU1-56P-201ENST00000391303 L3MBTL2Q969R5 705 aa10.13□□□□□ -0.79
RNU1-56P-201ENST00000391303 NBPF1Q3BBV0 1214 aa10.12□□□□□ -0.79
RNU1-56P-201ENST00000391303 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
RNU1-56P-201ENST00000391303 RALGAPBQ86X10 1494 aa10.11□□□□□ -0.79
RNU1-56P-201ENST00000391303 FAM83GA6ND36 823 aa10.11□□□□□ -0.79
RNU1-56P-201ENST00000391303 NBPF8Q3BBV2 869 aa10.11□□□□□ -0.79
RNU1-56P-201ENST00000391303 USP32Q8NFA0 1604 aa10.11□□□□□ -0.79
RNU1-56P-201ENST00000391303 KIAA1210Q9ULL0 1709 aa10.1□□□□□ -0.79
RNU1-56P-201ENST00000391303 ACEP12821 1306 aa10.1□□□□□ -0.79
RNU1-56P-201ENST00000391303 PAK3O75914 559 aaPredicted RBP10.09□□□□□ -0.79
RNU1-56P-201ENST00000391303 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
RNU1-56P-201ENST00000391303 PRDM11Q9NQV5 511 aa10.09□□□□□ -0.79
RNU1-56P-201ENST00000391303 EVC2Q86UK5 1308 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 SLC24A1O60721 1099 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 NLRP13Q86W25 1043 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 SEPT12Q8IYM1 358 aa10.08□□□□□ -0.8
RNU1-56P-201ENST00000391303 ZNF692Q9BU19 519 aaPredicted RBP10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms