RNA–Protein interactions for RNA: ENST00000391111.1

RNU11-3P-201, Transcript of RNA, U11 small nuclear 3, pseudogene, humanhuman

BASIC

Gene RNU11-3P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU11-3P-201ENST00000391111 PPP4R3BQ5MIZ7 849 aa3.28□□□□□ -1.88
RNU11-3P-201ENST00000391111 GPR153Q6NV75 609 aa3.28□□□□□ -1.88
RNU11-3P-201ENST00000391111 RDH13Q8NBN7 331 aa3.28□□□□□ -1.88
RNU11-3P-201ENST00000391111 CABLES1Q8TDN4 633 aa3.28□□□□□ -1.88
RNU11-3P-201ENST00000391111 TMEM88BA6NKF7 163 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 NUDT7P0C024 238 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 COL9A1P20849 921 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 HDGFP51858 240 aaKnown RBP3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 EIF4G2P78344 907 aaKnown RBP eCLIP3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 VAC14Q08AM6 782 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 SLF2Q8IX21 1173 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 NFATC2IPQ8NCF5 419 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 CCER1Q8TC90 406 aaPredicted RBP3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 METRNQ9UJH8 293 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 PCDHGC3Q9UN70 934 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 IVNS1ABPQ9Y6Y0 642 aa3.27□□□□□ -1.89
RNU11-3P-201ENST00000391111 ATP9BO43861 1147 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 LZTS3O60299 673 aaPredicted RBP3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 GPR37L1O60883 481 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 SLC4A3P48751 1232 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 MCCD1P59942 119 aaPredicted RBP3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 ARSIQ5FYB1 569 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 DESI1Q6ICB0 168 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 PRR7Q8TB68 274 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 ZNF592Q92610 1267 aa3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 MAFBQ9Y5Q3 323 aaPredicted RBP3.26□□□□□ -1.89
RNU11-3P-201ENST00000391111 RBM47A0AV96 593 aaKnown RBP3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 ARID4AP29374 1257 aaPredicted RBP3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 ATP6V1AP38606 617 aa3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 KANK4Q5T7N3 995 aaPredicted RBP3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 TXNDC2Q86VQ3 553 aa3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 UCN2Q96RP3 112 aa3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 HMX1Q9NP08 348 aaPredicted RBP3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 LHX6Q9UPM6 363 aa3.25□□□□□ -1.89
RNU11-3P-201ENST00000391111 ZC3H4Q9UPT8 1303 aaKnown RBP3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 LOC105371045A0A1W2PR82 267 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 CFAP99D6REC4 459 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 C3orf80F5H4A9 247 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 SLC10A3P09131 477 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 HOXB3P14651 431 aaPredicted RBP3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 NR1H3Q13133 447 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 TBC1D9Q6ZT07 1266 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 LRRN4Q8WUT4 740 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 ZNF428Q96B54 188 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 SLC4A5Q9BY07 1137 aa3.24□□□□□ -1.89
RNU11-3P-201ENST00000391111 C6orf229H3BNL8 230 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 CDCA8Q53HL2 280 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 RETREG3Q86VR2 466 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 PLEKHM2Q8IWE5 1019 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 KHSRPQ92945 711 aaKnown RBP eCLIP3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 SIRT1Q96EB6 747 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 KCNH8Q96L42 1107 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 CDCA7Q9BWT1 371 aaPredicted RBP3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 KIAA1468Q9P260 1216 aa3.23□□□□□ -1.89
RNU11-3P-201ENST00000391111 FAM196BA6NMK8 535 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 SMAPO00193 183 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 IGSF3O75054 1194 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 SSFA2P28290 1259 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 GUCA2AQ02747 115 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 NR6A1Q15406 480 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 Q3C1V9 767 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 SWT1Q5T5J6 900 aaKnown RBP3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 LYPD8Q6UX82 237 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 EPS8L1Q8TE68 723 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 TSC1Q92574 1164 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 CLP1Q92989 425 aaKnown RBP3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 IGSF5Q9NSI5 407 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 RABGEF1Q9UJ41 708 aa3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 SALL2Q9Y467 1007 aaPredicted RBP3.22□□□□□ -1.89
RNU11-3P-201ENST00000391111 CARNS1A5YM72 827 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 ZBBXA8MT70 800 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 ATP5J2-PTCD1G3V325 749 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 SNPHO15079 494 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 HMGB1P09429 215 aaKnown RBP3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 KMT5BQ4FZB7 885 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 LARP1Q6PKG0 1096 aaKnown RBP3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 LAPTM4BQ86VI4 370 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 C1orf216Q8TAB5 229 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 ZBED2Q9BTP6 218 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 GPSM3Q9Y4H4 160 aa3.21□□□□□ -1.9
RNU11-3P-201ENST00000391111 POTEIP0CG38 1075 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 SKIP12755 728 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 HOXB1P14653 301 aaPredicted RBP3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 FUT2Q10981 343 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 FAM98CQ17RN3 349 aaKnown RBP3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 SWI5Q1ZZU3 235 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 PROX2Q3B8N5 592 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 MAP7D1Q3KQU3 841 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 MORN1Q5T089 497 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 TMEM164Q5U3C3 297 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 PHLDB3Q6NSJ2 640 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 ARMC2Q8NEN0 867 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 FAM200AQ8TCP9 573 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 GPKOWQ92917 476 aaPredicted RBP eCLIP3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 HLA-CQ95604 372 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 MKRN1Q9UHC7 482 aaKnown RBP3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 FKBPLQ9UIM3 349 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 MYT1LQ9UL68 1186 aa3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 NOVA2Q9UNW9 492 aaKnown RBP3.2□□□□□ -1.9
RNU11-3P-201ENST00000391111 USP17L3A6NCW0 530 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms