RNA–Protein interactions for RNA: ENST00000390534.1

TRAJ3-201, Transcript of T cell receptor alpha joining 3, humanhuman

APPRIS P1 BASIC

Gene TRAJ3, Length 62 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ3-201ENST00000390534 SEC24BO95487 1268 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 HSP90B1P14625 803 aaKnown RBP1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 COL9A1P20849 921 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 SOX11P35716 441 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 TMEM164Q5U3C3 297 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 PHLDB3Q6NSJ2 640 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 NUDT18Q6ZVK8 323 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 TXNDC2Q86VQ3 553 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 CCER1Q8TC90 406 aaPredicted RBP1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 KHSRPQ92945 711 aaKnown RBP eCLIP1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 MRRFQ96E11 262 aaKnown RBP1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 PUS7Q96PZ0 661 aaKnown RBP1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 TMEM134Q9H6X4 195 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 TSKSQ9UJT2 592 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 PNMA3Q9UL41 463 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 PCDHGC3Q9UN70 934 aa1.81□□□□□ -2.12
TRAJ3-201ENST00000390534 POTEFA5A3E0 1075 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L3A6NCW0 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L4A6NCW7 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L15C9J2P7 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L10C9JJH3 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L13C9JLJ4 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L12C9JPN9 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L11C9JVI0 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L21D6R901 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L18D6R9N7 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L22D6RA61 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L17D6RBQ6 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L19D6RCP7 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L20D6RJB6 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 SMAPO00193 183 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 HMGB1P09429 215 aaKnown RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 NUDT7P0C024 238 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 TCF3P15923 654 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 ZNF16P17020 682 aaPredicted RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 SERPINB4P48594 390 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP46P62068 366 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L24Q0WX57 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 SEMA3FQ13275 785 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 MTMR2Q13614 643 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 NR6A1Q15406 480 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 NOM1Q5C9Z4 860 aaKnown RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 KANK4Q5T7N3 995 aaPredicted RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 RSPH4AQ5TD94 716 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L2Q6R6M4 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 DNAJC14Q6Y2X3 702 aaPredicted RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L1Q7RTZ2 530 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 PELP1Q8IZL8 1130 aaKnown RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 GIPC2Q8TF65 315 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 SLAIN2Q9P270 581 aa1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 NOVA2Q9UNW9 492 aaKnown RBP1.8□□□□□ -2.12
TRAJ3-201ENST00000390534 SOWAHDA6NJG2 315 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 USP17L5A8MUK1 530 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 PPP1R3GB7ZBB8 358 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 C6orf229H3BNL8 230 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 PER1O15534 1290 aaPredicted RBP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 SLC10A3P09131 477 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 SKIP12755 728 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 ATP2B4P23634 1241 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 SCNN1AP37088 669 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 GCGRP47871 477 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 EIF4G2P78344 907 aaKnown RBP eCLIP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 NR1H3Q13133 447 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 ELOAQ14241 798 aaKnown RBP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 CRTC2Q53ET0 693 aaPredicted RBP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 SLF2Q8IX21 1173 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 FAM177A1Q8N128 213 aaPredicted RBP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 DEPDC4Q8N2C3 294 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 FAM174AQ8TBP5 190 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 SYMPKQ92797 1274 aaKnown RBP1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 TATDN2Q93075 761 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 BCL2L13Q9BXK5 485 aa1.79□□□□□ -2.12
TRAJ3-201ENST00000390534 FAM196BA6NMK8 535 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 TRIM6-TRIM34B2RNG4 842 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 FBXO45P0C2W1 286 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 ERCC3P19447 782 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 SSFA2P28290 1259 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 ARID4AP29374 1257 aaPredicted RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 MARSP56192 900 aaKnown RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 EVX2Q03828 476 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 FUT2Q10981 343 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 ZNF211Q13398 564 aaPredicted RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 PROX2Q3B8N5 592 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 ARSIQ5FYB1 569 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 PPP4R3BQ5MIZ7 849 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 SWT1Q5T5J6 900 aaKnown RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 NPAS4Q8IUM7 802 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 PLEKHM2Q8IWE5 1019 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 PNMA1Q8ND90 353 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 SLC39A7Q92504 469 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 CLP1Q92989 425 aaKnown RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 BCL2L12Q9HB09 334 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 BIN2Q9UBW5 565 aaPredicted RBP1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 METRNQ9UJH8 293 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 LHX6Q9UPM6 363 aa1.78□□□□□ -2.12
TRAJ3-201ENST00000390534 ANKRD33BA6NCL7 494 aa1.77□□□□□ -2.13
TRAJ3-201ENST00000390534 ZBBXA8MT70 800 aa1.77□□□□□ -2.13
TRAJ3-201ENST00000390534 H3BRB1 525 aa1.77□□□□□ -2.13
TRAJ3-201ENST00000390534 HAX1O00165 279 aa1.77□□□□□ -2.13
TRAJ3-201ENST00000390534 RECKO95980 971 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms