RNA–Protein interactions for RNA: ENST00000390498.1

TRAJ39-201, Transcript of T cell receptor alpha joining 39, humanhuman

APPRIS P1 BASIC

Gene TRAJ39, Length 63 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ39-201ENST00000390498 MRRFQ96E11 262 aaKnown RBP2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 TMEM134Q9H6X4 195 aa2.59□□□□□ -1.99
TRAJ39-201ENST00000390498 NBPF26B4DH59 902 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 SEC24BO95487 1268 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 CANXP27824 592 aaKnown RBP2.58□□□□□ -2
TRAJ39-201ENST00000390498 GCGRP47871 477 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 MTMR2Q13614 643 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 KANK4Q5T7N3 995 aaPredicted RBP2.58□□□□□ -2
TRAJ39-201ENST00000390498 TMEM164Q5U3C3 297 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 C3orf67Q6ZVT6 689 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 SLF2Q8IX21 1173 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 RDH13Q8NBN7 331 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 NFATC2IPQ8NCF5 419 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 LRRN4Q8WUT4 740 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 ADAM33Q9BZ11 813 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 KIAA1522Q9P206 1035 aaPredicted RBP2.58□□□□□ -2
TRAJ39-201ENST00000390498 FAM198AQ9UFP1 575 aa2.58□□□□□ -2
TRAJ39-201ENST00000390498 SOWAHDA6NJG2 315 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 ZNF16P17020 682 aaPredicted RBP2.57□□□□□ -2
TRAJ39-201ENST00000390498 VAMP1P23763 118 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 SSFA2P28290 1259 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 PHLDB3Q6NSJ2 640 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 NUDT18Q6ZVK8 323 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 PACS2Q86VP3 889 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 CCDC125Q86Z20 511 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 PLEKHM2Q8IWE5 1019 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 FAM177A1Q8N128 213 aaPredicted RBP2.57□□□□□ -2
TRAJ39-201ENST00000390498 DRC1Q96MC2 740 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 C8orf37Q96NL8 207 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 BCL2L13Q9BXK5 485 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 ZMIZ1Q9ULJ6 1067 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 PCDHGC3Q9UN70 934 aa2.57□□□□□ -2
TRAJ39-201ENST00000390498 NOVA2Q9UNW9 492 aaKnown RBP2.57□□□□□ -2
TRAJ39-201ENST00000390498 FAM196BA6NMK8 535 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 PPP1R3GB7ZBB8 358 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 CFAP99D6REC4 459 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 TCF3P15923 654 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 MARSP56192 900 aaKnown RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 NR1H3Q13133 447 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 GRIPAP1Q4V328 841 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 ZNF326Q5BKZ1 582 aaKnown RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 PELP1Q8IZL8 1130 aaKnown RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 STK32AQ8WU08 396 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 TSC1Q92574 1164 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 CLP1Q92989 425 aaKnown RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 TATDN2Q93075 761 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 CDCA7Q9BWT1 371 aaPredicted RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 TSKSQ9UJT2 592 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 PNMA3Q9UL41 463 aa2.56□□□□□ -2
TRAJ39-201ENST00000390498 COLQQ9Y215 455 aaPredicted RBP2.56□□□□□ -2
TRAJ39-201ENST00000390498 PSDA5PKW4 1024 aaPredicted RBP2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L3A6NCW0 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L4A6NCW7 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 TRIM6-TRIM34B2RNG4 842 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L15C9J2P7 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L10C9JJH3 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L13C9JLJ4 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L12C9JPN9 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L11C9JVI0 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L21D6R901 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L18D6R9N7 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L22D6RA61 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L17D6RBQ6 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L19D6RCP7 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L20D6RJB6 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 C6orf229H3BNL8 230 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 LZTS3O60299 673 aaPredicted RBP2.55□□□□□ -2
TRAJ39-201ENST00000390498 COL9A1P20849 921 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 FAM69CQ0P6D2 419 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L24Q0WX57 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 NR6A1Q15406 480 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 SWI5Q1ZZU3 235 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 NOM1Q5C9Z4 860 aaKnown RBP2.55□□□□□ -2
TRAJ39-201ENST00000390498 LARP1Q6PKG0 1096 aaKnown RBP2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L2Q6R6M4 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 USP17L1Q7RTZ2 530 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 C1orf216Q8TAB5 229 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 FAM200AQ8TCP9 573 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 EPS8L1Q8TE68 723 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 GIPC2Q8TF65 315 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 SREK1Q8WXA9 508 aaKnown RBP2.55□□□□□ -2
TRAJ39-201ENST00000390498 ZNF592Q92610 1267 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 BCL11AQ9H165 835 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 BCL2L12Q9HB09 334 aa2.55□□□□□ -2
TRAJ39-201ENST00000390498 ANKRD33BA6NCL7 494 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 ZBBXA8MT70 800 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 USP17L5A8MUK1 530 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 C3orf80F5H4A9 247 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 ATP5J2-PTCD1G3V325 749 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 C7P10643 843 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 SKIP12755 728 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 PTPREP23469 700 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 ATP2B4P23634 1241 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 MCCD1P59942 119 aaPredicted RBP2.54□□□□□ -2
TRAJ39-201ENST00000390498 ZC3H6P61129 1189 aaKnown RBP2.54□□□□□ -2
TRAJ39-201ENST00000390498 GUCA2AQ02747 115 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 PTK7Q13308 1070 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 PPP4R3BQ5MIZ7 849 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 DESI1Q6ICB0 168 aa2.54□□□□□ -2
TRAJ39-201ENST00000390498 NPAS4Q8IUM7 802 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms