RNA–Protein interactions for RNA: ENST00000390426.2

TRAV4-201, Transcript of T cell receptor alpha variable 4, humanhuman

APPRIS P1 BASIC

Gene TRAV4, Length 395 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV4-201ENST00000390426 ACIN1Q9UKV3 1341 aaKnown RBP15.86■□□□□ 0.13
TRAV4-201ENST00000390426 LRPPRCP42704 1394 aaKnown RBP15.86■□□□□ 0.13
TRAV4-201ENST00000390426 NUTM2FA1L443 756 aa15.85■□□□□ 0.13
TRAV4-201ENST00000390426 ADAMTS2O95450 1211 aa15.85■□□□□ 0.13
TRAV4-201ENST00000390426 ABCC11Q96J66 1382 aa15.84■□□□□ 0.13
TRAV4-201ENST00000390426 RAB3GAP2Q9H2M9 1393 aa15.84■□□□□ 0.13
TRAV4-201ENST00000390426 PLEKHH1Q9ULM0 1364 aa15.84■□□□□ 0.13
TRAV4-201ENST00000390426 PIK3C2GO75747 1445 aa15.83■□□□□ 0.12
TRAV4-201ENST00000390426 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
TRAV4-201ENST00000390426 CFAP70Q5T0N1 1121 aa15.82■□□□□ 0.12
TRAV4-201ENST00000390426 NGLY1Q96IV0 654 aa15.82■□□□□ 0.12
TRAV4-201ENST00000390426 QTRT2Q9H974 415 aaKnown RBP15.82■□□□□ 0.12
TRAV4-201ENST00000390426 TECPR2O15040 1411 aa15.82■□□□□ 0.12
TRAV4-201ENST00000390426 FOXO3O43524 673 aa15.81■□□□□ 0.12
TRAV4-201ENST00000390426 XPCQ01831 940 aaPredicted RBP15.81■□□□□ 0.12
TRAV4-201ENST00000390426 CDC42BPGQ6DT37 1551 aa15.81■□□□□ 0.12
TRAV4-201ENST00000390426 YTHDC2Q9H6S0 1430 aaKnown RBP15.81■□□□□ 0.12
TRAV4-201ENST00000390426 C14orf93Q9H972 538 aaKnown RBP15.81■□□□□ 0.12
TRAV4-201ENST00000390426 LAMC1P11047 1609 aa15.8■□□□□ 0.12
TRAV4-201ENST00000390426 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
TRAV4-201ENST00000390426 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
TRAV4-201ENST00000390426 DHX57Q6P158 1386 aaKnown RBP15.77■□□□□ 0.12
TRAV4-201ENST00000390426 RBM6P78332 1123 aaKnown RBP15.77■□□□□ 0.12
TRAV4-201ENST00000390426 SIRT1Q96EB6 747 aa15.77■□□□□ 0.12
TRAV4-201ENST00000390426 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
TRAV4-201ENST00000390426 PXDNQ92626 1479 aa15.76■□□□□ 0.11
TRAV4-201ENST00000390426 KNDC1Q76NI1 1749 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 USP21Q9UK80 565 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 KDM2AQ9Y2K7 1162 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 MYOM2P54296 1465 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 CDK12Q9NYV4 1490 aaPredicted RBP15.75■□□□□ 0.11
TRAV4-201ENST00000390426 NRXN1Q9ULB1 1477 aa15.75■□□□□ 0.11
TRAV4-201ENST00000390426 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
TRAV4-201ENST00000390426 POGKQ9P215 609 aa15.73■□□□□ 0.11
TRAV4-201ENST00000390426 RGS12O14924 1447 aa15.73■□□□□ 0.11
TRAV4-201ENST00000390426 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
TRAV4-201ENST00000390426 DCAF11Q8TEB1 546 aa15.72■□□□□ 0.11
TRAV4-201ENST00000390426 TRPC5Q9UL62 973 aaPredicted RBP15.71■□□□□ 0.11
TRAV4-201ENST00000390426 PHF8Q9UPP1 1060 aa15.71■□□□□ 0.11
TRAV4-201ENST00000390426 TRAK1Q9UPV9 953 aa15.71■□□□□ 0.11
TRAV4-201ENST00000390426 COL22A1Q8NFW1 1626 aaPredicted RBP15.71■□□□□ 0.11
TRAV4-201ENST00000390426 FMN2Q9NZ56 1722 aa15.71■□□□□ 0.1
TRAV4-201ENST00000390426 SPATA31A3Q5VYP0 1347 aa15.7■□□□□ 0.1
TRAV4-201ENST00000390426 HRCP23327 699 aa15.69■□□□□ 0.1
TRAV4-201ENST00000390426 PLEKHG5O94827 1062 aa15.68■□□□□ 0.1
TRAV4-201ENST00000390426 HIRIP3Q9BW71 556 aaPredicted RBP15.68■□□□□ 0.1
TRAV4-201ENST00000390426 ATRNO75882 1429 aa15.68■□□□□ 0.1
TRAV4-201ENST00000390426 PSME1Q06323 249 aa15.67■□□□□ 0.1
TRAV4-201ENST00000390426 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
TRAV4-201ENST00000390426 KIF1AQ12756 1690 aa15.67■□□□□ 0.1
TRAV4-201ENST00000390426 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
TRAV4-201ENST00000390426 DLC1Q96QB1 1528 aa15.66■□□□□ 0.1
TRAV4-201ENST00000390426 ADGRB1O14514 1584 aa15.66■□□□□ 0.1
TRAV4-201ENST00000390426 MINK1Q8N4C8 1332 aaPredicted RBP15.66■□□□□ 0.1
TRAV4-201ENST00000390426 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
TRAV4-201ENST00000390426 HAP1P54257 671 aaPredicted RBP15.65■□□□□ 0.1
TRAV4-201ENST00000390426 CABLES1Q8TDN4 633 aa15.65■□□□□ 0.1
TRAV4-201ENST00000390426 STAC3Q96MF2 364 aa15.64■□□□□ 0.09
TRAV4-201ENST00000390426 RGPD8O14715 1765 aaPredicted RBP15.64■□□□□ 0.09
TRAV4-201ENST00000390426 TNS3Q68CZ2 1445 aa15.63■□□□□ 0.09
TRAV4-201ENST00000390426 GJD4Q96KN9 370 aaPredicted RBP15.63■□□□□ 0.09
TRAV4-201ENST00000390426 ANKARQ7Z5J8 1434 aa15.62■□□□□ 0.09
TRAV4-201ENST00000390426 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
TRAV4-201ENST00000390426 SBNO1A3KN83 1393 aa15.62■□□□□ 0.09
TRAV4-201ENST00000390426 PRR36Q9H6K5 1346 aa15.61■□□□□ 0.09
TRAV4-201ENST00000390426 ATAD2Q6PL18 1390 aa15.61■□□□□ 0.09
TRAV4-201ENST00000390426 MARF1Q9Y4F3 1742 aaKnown RBP15.6■□□□□ 0.09
TRAV4-201ENST00000390426 WASLO00401 505 aaPredicted RBP15.6■□□□□ 0.09
TRAV4-201ENST00000390426 SLIT2O94813 1529 aa15.59■□□□□ 0.09
TRAV4-201ENST00000390426 ADGRB2O60241 1585 aa15.59■□□□□ 0.09
TRAV4-201ENST00000390426 USP32Q8NFA0 1604 aa15.59■□□□□ 0.09
TRAV4-201ENST00000390426 ARHGEF10O15013 1369 aa15.59■□□□□ 0.09
TRAV4-201ENST00000390426 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
TRAV4-201ENST00000390426 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
TRAV4-201ENST00000390426 RALGAPBQ86X10 1494 aa15.57■□□□□ 0.08
TRAV4-201ENST00000390426 FAM83GA6ND36 823 aa15.56■□□□□ 0.08
TRAV4-201ENST00000390426 NGDNQ8NEJ9 315 aaKnown RBP15.56■□□□□ 0.08
TRAV4-201ENST00000390426 TULP4Q9NRJ4 1543 aa15.55■□□□□ 0.08
TRAV4-201ENST00000390426 CCDC9Q9Y3X0 531 aaKnown RBP15.55■□□□□ 0.08
TRAV4-201ENST00000390426 PAK3O75914 559 aaPredicted RBP15.54■□□□□ 0.08
TRAV4-201ENST00000390426 VPS72Q15906 364 aa15.54■□□□□ 0.08
TRAV4-201ENST00000390426 NUDT16Q96DE0 195 aaKnown RBP15.54■□□□□ 0.08
TRAV4-201ENST00000390426 GLI3P10071 1580 aa15.53■□□□□ 0.08
TRAV4-201ENST00000390426 NBPF1Q3BBV0 1214 aa15.53■□□□□ 0.08
TRAV4-201ENST00000390426 CDK19Q9BWU1 502 aa15.53■□□□□ 0.08
TRAV4-201ENST00000390426 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.53■□□□□ 0.08
TRAV4-201ENST00000390426 SEPT12Q8IYM1 358 aa15.52■□□□□ 0.08
TRAV4-201ENST00000390426 ARHGEF28Q8N1W1 1705 aaKnown RBP15.51■□□□□ 0.07
TRAV4-201ENST00000390426 TRPM3Q9HCF6 1732 aaPredicted RBP15.51■□□□□ 0.07
TRAV4-201ENST00000390426 BTG4Q9NY30 223 aa15.5■□□□□ 0.07
TRAV4-201ENST00000390426 ABCA3Q99758 1704 aa15.5■□□□□ 0.07
TRAV4-201ENST00000390426 PLCH1Q4KWH8 1693 aa15.49■□□□□ 0.07
TRAV4-201ENST00000390426 ATP7BP35670 1465 aa15.49■□□□□ 0.07
TRAV4-201ENST00000390426 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
TRAV4-201ENST00000390426 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
TRAV4-201ENST00000390426 ALS2Q96Q42 1657 aa15.48■□□□□ 0.07
TRAV4-201ENST00000390426 A0A0G2JS52 829 aa15.47■□□□□ 0.07
TRAV4-201ENST00000390426 MYT1Q01538 1121 aa15.47■□□□□ 0.07
TRAV4-201ENST00000390426 NUTM2GQ5VZR2 741 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms