RNA–Protein interactions for RNA: ENST00000390394.3

TRBV20-1-201, Transcript of T cell receptor beta variable 20-1, humanhuman

APPRIS P1 BASIC

Gene TRBV20-1, Length 413 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV20-1-201ENST00000390394 PHF23Q9BUL5 403 aaPredicted RBP13.6□□□□□ -0.23
TRBV20-1-201ENST00000390394 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
TRBV20-1-201ENST00000390394 PIP4K2BP78356 416 aa13.59□□□□□ -0.23
TRBV20-1-201ENST00000390394 TMEM94Q12767 1356 aa13.58□□□□□ -0.23
TRBV20-1-201ENST00000390394 USP47Q96K76 1375 aa13.58□□□□□ -0.23
TRBV20-1-201ENST00000390394 ROBO2Q9HCK4 1378 aa13.58□□□□□ -0.23
TRBV20-1-201ENST00000390394 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
TRBV20-1-201ENST00000390394 MSH6P52701 1360 aa13.58□□□□□ -0.24
TRBV20-1-201ENST00000390394 LRRC7Q96NW7 1537 aa13.57□□□□□ -0.24
TRBV20-1-201ENST00000390394 SBNO2Q9Y2G9 1366 aa13.57□□□□□ -0.24
TRBV20-1-201ENST00000390394 ATF3P18847 181 aa13.56□□□□□ -0.24
TRBV20-1-201ENST00000390394 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
TRBV20-1-201ENST00000390394 CADPS2Q86UW7 1296 aa13.56□□□□□ -0.24
TRBV20-1-201ENST00000390394 ARHGEF28Q8N1W1 1705 aaKnown RBP13.56□□□□□ -0.24
TRBV20-1-201ENST00000390394 CDCA8Q53HL2 280 aa13.55□□□□□ -0.24
TRBV20-1-201ENST00000390394 DCCP43146 1447 aa13.55□□□□□ -0.24
TRBV20-1-201ENST00000390394 ADGRL3Q9HAR2 1447 aa13.55□□□□□ -0.24
TRBV20-1-201ENST00000390394 STRCP1A6NGW2 1772 aa13.54□□□□□ -0.24
TRBV20-1-201ENST00000390394 ST20-MTHFSA0A0A6YYL1 179 aa13.54□□□□□ -0.24
TRBV20-1-201ENST00000390394 SAFB2Q14151 953 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRBV20-1-201ENST00000390394 EVC2Q86UK5 1308 aa13.54□□□□□ -0.24
TRBV20-1-201ENST00000390394 TMF1P82094 1093 aa13.53□□□□□ -0.24
TRBV20-1-201ENST00000390394 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.25
TRBV20-1-201ENST00000390394 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
TRBV20-1-201ENST00000390394 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
TRBV20-1-201ENST00000390394 HSPA5P11021 654 aaKnown RBP13.51□□□□□ -0.25
TRBV20-1-201ENST00000390394 PUS7Q96PZ0 661 aaKnown RBP13.51□□□□□ -0.25
TRBV20-1-201ENST00000390394 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
TRBV20-1-201ENST00000390394 ADGRB2O60241 1585 aa13.49□□□□□ -0.25
TRBV20-1-201ENST00000390394 CDC42BPGQ6DT37 1551 aa13.49□□□□□ -0.25
TRBV20-1-201ENST00000390394 SRPK2P78362 688 aaKnown RBP13.49□□□□□ -0.25
TRBV20-1-201ENST00000390394 RBM33Q96EV2 1170 aaKnown RBP13.49□□□□□ -0.25
TRBV20-1-201ENST00000390394 TESK2Q96S53 571 aa13.48□□□□□ -0.25
TRBV20-1-201ENST00000390394 HIRIP3Q9BW71 556 aaPredicted RBP13.48□□□□□ -0.25
TRBV20-1-201ENST00000390394 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
TRBV20-1-201ENST00000390394 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
TRBV20-1-201ENST00000390394 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
TRBV20-1-201ENST00000390394 ATAD2Q6PL18 1390 aa13.46□□□□□ -0.25
TRBV20-1-201ENST00000390394 NALCNQ8IZF0 1738 aa13.46□□□□□ -0.25
TRBV20-1-201ENST00000390394 XIRP1Q702N8 1843 aaKnown RBP13.46□□□□□ -0.26
TRBV20-1-201ENST00000390394 SLAIN2Q9P270 581 aa13.45□□□□□ -0.26
TRBV20-1-201ENST00000390394 RGS17Q9UGC6 210 aaPredicted RBP13.45□□□□□ -0.26
TRBV20-1-201ENST00000390394 CCDC61Q9Y6R9 512 aa13.45□□□□□ -0.26
TRBV20-1-201ENST00000390394 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
TRBV20-1-201ENST00000390394 TULP4Q9NRJ4 1543 aa13.44□□□□□ -0.26
TRBV20-1-201ENST00000390394 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
TRBV20-1-201ENST00000390394 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
TRBV20-1-201ENST00000390394 C1orf167Q5SNV9 1468 aa13.42□□□□□ -0.26
TRBV20-1-201ENST00000390394 FMN2Q9NZ56 1722 aa13.42□□□□□ -0.26
TRBV20-1-201ENST00000390394 MST1RQ04912 1400 aa13.41□□□□□ -0.26
TRBV20-1-201ENST00000390394 ESCO1Q5FWF5 840 aa13.41□□□□□ -0.26
TRBV20-1-201ENST00000390394 NUTM2FA1L443 756 aa13.4□□□□□ -0.26
TRBV20-1-201ENST00000390394 ZNF692Q9BU19 519 aaPredicted RBP13.39□□□□□ -0.27
TRBV20-1-201ENST00000390394 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
TRBV20-1-201ENST00000390394 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
TRBV20-1-201ENST00000390394 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
TRBV20-1-201ENST00000390394 ATP7BP35670 1465 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 PLEKHG3A1L390 1219 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 HDGFL2Q7Z4V5 671 aaPredicted RBP13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 NGDNQ8NEJ9 315 aaKnown RBP13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 TMC1Q8TDI8 760 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 POLR3GLQ9BT43 218 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
TRBV20-1-201ENST00000390394 PSME1Q06323 249 aa13.37□□□□□ -0.27
TRBV20-1-201ENST00000390394 KIF1AQ12756 1690 aa13.37□□□□□ -0.27
TRBV20-1-201ENST00000390394 BRD4O60885 1362 aaPredicted RBP13.36□□□□□ -0.27
TRBV20-1-201ENST00000390394 BRINP3Q76B58 766 aa13.36□□□□□ -0.27
TRBV20-1-201ENST00000390394 CABP1Q9NZU7 370 aa13.36□□□□□ -0.27
TRBV20-1-201ENST00000390394 PRR36Q9H6K5 1346 aa13.36□□□□□ -0.27
TRBV20-1-201ENST00000390394 ZNF316A6NFI3 1004 aaPredicted RBP13.35□□□□□ -0.27
TRBV20-1-201ENST00000390394 ORAI2Q96SN7 254 aa13.35□□□□□ -0.27
TRBV20-1-201ENST00000390394 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
TRBV20-1-201ENST00000390394 CCDC7Q96M83 1385 aa13.34□□□□□ -0.27
TRBV20-1-201ENST00000390394 POTEAQ6S8J7 498 aa13.34□□□□□ -0.27
TRBV20-1-201ENST00000390394 PMFBP1Q8TBY8 1022 aa13.34□□□□□ -0.27
TRBV20-1-201ENST00000390394 POLR3AO14802 1390 aaPredicted RBP13.33□□□□□ -0.27
TRBV20-1-201ENST00000390394 USP32Q8NFA0 1604 aa13.33□□□□□ -0.28
TRBV20-1-201ENST00000390394 ACEP12821 1306 aa13.33□□□□□ -0.28
TRBV20-1-201ENST00000390394 TOPAZ1Q8N9V7 1692 aa13.32□□□□□ -0.28
TRBV20-1-201ENST00000390394 FOXO3O43524 673 aa13.32□□□□□ -0.28
TRBV20-1-201ENST00000390394 SLC12A5Q9H2X9 1139 aa13.32□□□□□ -0.28
TRBV20-1-201ENST00000390394 WASHC2AQ641Q2 1341 aa13.32□□□□□ -0.28
TRBV20-1-201ENST00000390394 ANKRD36BQ8N2N9 1353 aa13.32□□□□□ -0.28
TRBV20-1-201ENST00000390394 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
TRBV20-1-201ENST00000390394 C11orf95C9JLR9 678 aaPredicted RBP13.31□□□□□ -0.28
TRBV20-1-201ENST00000390394 KRT28Q7Z3Y7 464 aa13.31□□□□□ -0.28
TRBV20-1-201ENST00000390394 KTN1Q86UP2 1357 aaKnown RBP13.31□□□□□ -0.28
TRBV20-1-201ENST00000390394 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
TRBV20-1-201ENST00000390394 RGPD8O14715 1765 aaPredicted RBP13.3□□□□□ -0.28
TRBV20-1-201ENST00000390394 SOS2Q07890 1332 aaPredicted RBP13.29□□□□□ -0.28
TRBV20-1-201ENST00000390394 TTC21AQ8NDW8 1320 aa13.29□□□□□ -0.28
TRBV20-1-201ENST00000390394 SBNO1A3KN83 1393 aa13.29□□□□□ -0.28
TRBV20-1-201ENST00000390394 CPSF1Q10570 1443 aaKnown RBP13.29□□□□□ -0.28
TRBV20-1-201ENST00000390394 AHDC1Q5TGY3 1603 aaPredicted RBP13.28□□□□□ -0.28
TRBV20-1-201ENST00000390394 USP6P35125 1406 aa13.28□□□□□ -0.28
TRBV20-1-201ENST00000390394 EDC4Q6P2E9 1401 aaKnown RBP13.28□□□□□ -0.28
TRBV20-1-201ENST00000390394 PAK3O75914 559 aaPredicted RBP13.27□□□□□ -0.29
TRBV20-1-201ENST00000390394 KNSTRNQ9Y448 316 aa13.27□□□□□ -0.29
TRBV20-1-201ENST00000390394 A0A1W2PP64 1363 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms