RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 ERICH6BQ5W0A0 696 aa24.29■■□□□ 1.48
ACTN4-202ENST00000390009 NRXN3Q9Y4C0 1643 aa24.29■■□□□ 1.48
ACTN4-202ENST00000390009 POGKQ9P215 609 aa24.29■■□□□ 1.48
ACTN4-202ENST00000390009 ANKRD36BQ8N2N9 1353 aa24.28■■□□□ 1.48
ACTN4-202ENST00000390009 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
ACTN4-202ENST00000390009 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.27■■□□□ 1.48
ACTN4-202ENST00000390009 MINK1Q8N4C8 1332 aaPredicted RBP24.27■■□□□ 1.48
ACTN4-202ENST00000390009 DLC1Q96QB1 1528 aa24.26■■□□□ 1.47
ACTN4-202ENST00000390009 PDE3BQ13370 1112 aa24.26■■□□□ 1.47
ACTN4-202ENST00000390009 SRPK2P78362 688 aaKnown RBP24.25■■□□□ 1.47
ACTN4-202ENST00000390009 NINLQ9Y2I6 1382 aa24.25■■□□□ 1.47
ACTN4-202ENST00000390009 CGNL1Q0VF96 1302 aa24.24■■□□□ 1.47
ACTN4-202ENST00000390009 RNF123Q5XPI4 1314 aa24.23■■□□□ 1.47
ACTN4-202ENST00000390009 ATAD2Q6PL18 1390 aa24.22■■□□□ 1.47
ACTN4-202ENST00000390009 MORC1Q86VD1 984 aa24.22■■□□□ 1.47
ACTN4-202ENST00000390009 TRHP20396 242 aaPredicted RBP24.2■■□□□ 1.47
ACTN4-202ENST00000390009 HDGFP51858 240 aaKnown RBP24.2■■□□□ 1.47
ACTN4-202ENST00000390009 ABCC11Q96J66 1382 aa24.19■■□□□ 1.46
ACTN4-202ENST00000390009 A0A1W2PP64 1363 aa24.19■■□□□ 1.46
ACTN4-202ENST00000390009 POLR3AO14802 1390 aaPredicted RBP24.19■■□□□ 1.46
ACTN4-202ENST00000390009 NSD2O96028 1365 aa24.19■■□□□ 1.46
ACTN4-202ENST00000390009 TMEM2Q9UHN6 1383 aa24.19■■□□□ 1.46
ACTN4-202ENST00000390009 C3P01024 1663 aa24.18■■□□□ 1.46
ACTN4-202ENST00000390009 FER1L4A9Z1Z3 1794 aa24.18■■□□□ 1.46
ACTN4-202ENST00000390009 METP08581 1390 aa24.17■■□□□ 1.46
ACTN4-202ENST00000390009 PPP4R2Q9NY27 417 aa24.17■■□□□ 1.46
ACTN4-202ENST00000390009 NLRP1Q9C000 1473 aa24.16■■□□□ 1.46
ACTN4-202ENST00000390009 CDCA7LQ96GN5 454 aa24.16■■□□□ 1.46
ACTN4-202ENST00000390009 KNDC1Q76NI1 1749 aa24.16■■□□□ 1.46
ACTN4-202ENST00000390009 WAPLQ7Z5K2 1190 aa24.16■■□□□ 1.46
ACTN4-202ENST00000390009 CDK19Q9BWU1 502 aa24.16■■□□□ 1.46
ACTN4-202ENST00000390009 PLEKHH1Q9ULM0 1364 aa24.15■■□□□ 1.46
ACTN4-202ENST00000390009 TNNT2P45379 298 aaPredicted RBP24.15■■□□□ 1.46
ACTN4-202ENST00000390009 CEBPAP49715 358 aaPredicted RBP24.14■■□□□ 1.46
ACTN4-202ENST00000390009 CD163L1Q9NR16 1453 aa24.14■■□□□ 1.45
ACTN4-202ENST00000390009 SHPRHQ149N8 1683 aa24.14■■□□□ 1.45
ACTN4-202ENST00000390009 TERF2IPQ9NYB0 399 aa24.13■■□□□ 1.45
ACTN4-202ENST00000390009 ANKRD26Q9UPS8 1709 aa24.11■■□□□ 1.45
ACTN4-202ENST00000390009 CCDC146Q8IYE0 955 aa24.1■■□□□ 1.45
ACTN4-202ENST00000390009 RCAN3Q9UKA8 241 aa24.1■■□□□ 1.45
ACTN4-202ENST00000390009 TECPR2O15040 1411 aa24.09■■□□□ 1.45
ACTN4-202ENST00000390009 CPS1P31327 1500 aa24.08■■□□□ 1.45
ACTN4-202ENST00000390009 ZNF521Q96K83 1311 aa24.08■■□□□ 1.44
ACTN4-202ENST00000390009 MTHFSP49914 203 aa24.07■■□□□ 1.44
ACTN4-202ENST00000390009 FAM135BQ49AJ0 1406 aa24.07■■□□□ 1.44
ACTN4-202ENST00000390009 ADAMTS13Q76LX8 1427 aa24.07■■□□□ 1.44
ACTN4-202ENST00000390009 HDGFL2Q7Z4V5 671 aaPredicted RBP24.07■■□□□ 1.44
ACTN4-202ENST00000390009 TXNDC2Q86VQ3 553 aa24.07■■□□□ 1.44
ACTN4-202ENST00000390009 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
ACTN4-202ENST00000390009 SIRT1Q96EB6 747 aa24.05■■□□□ 1.44
ACTN4-202ENST00000390009 TSHZ2Q9NRE2 1034 aa24.05■■□□□ 1.44
ACTN4-202ENST00000390009 KIF20BQ96Q89 1820 aa24.05■■□□□ 1.44
ACTN4-202ENST00000390009 PLEKHG1Q9ULL1 1385 aa24.05■■□□□ 1.44
ACTN4-202ENST00000390009 LTKP29376 864 aa24.05■■□□□ 1.44
ACTN4-202ENST00000390009 MED14O60244 1454 aa24.04■■□□□ 1.44
ACTN4-202ENST00000390009 APAF1O14727 1248 aa24.04■■□□□ 1.44
ACTN4-202ENST00000390009 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
ACTN4-202ENST00000390009 ATP7BP35670 1465 aa24.04■■□□□ 1.44
ACTN4-202ENST00000390009 CFAP53Q96M91 514 aa24.03■■□□□ 1.44
ACTN4-202ENST00000390009 GGNBP2Q9H3C7 697 aa24.03■■□□□ 1.44
ACTN4-202ENST00000390009 WASLO00401 505 aaPredicted RBP24.02■■□□□ 1.44
ACTN4-202ENST00000390009 FYB1O15117 783 aa24.02■■□□□ 1.44
ACTN4-202ENST00000390009 PLPPR3Q6T4P5 718 aa24.02■■□□□ 1.44
ACTN4-202ENST00000390009 SLIT1O75093 1534 aa24.02■■□□□ 1.44
ACTN4-202ENST00000390009 GOLGA2Q08379 1002 aa24.02■■□□□ 1.44
ACTN4-202ENST00000390009 B4GALNT3Q6L9W6 998 aa24.02■■□□□ 1.44
ACTN4-202ENST00000390009 ARHGAP23Q9P227 1491 aa24■■□□□ 1.43
ACTN4-202ENST00000390009 NGEFQ8N5V2 710 aa23.99■■□□□ 1.43
ACTN4-202ENST00000390009 EID1Q9Y6B2 187 aa23.99■■□□□ 1.43
ACTN4-202ENST00000390009 DUSP27Q5VZP5 1158 aa23.98■■□□□ 1.43
ACTN4-202ENST00000390009 ROBO2Q9HCK4 1378 aa23.97■■□□□ 1.43
ACTN4-202ENST00000390009 PPIP5K1Q6PFW1 1433 aa23.96■■□□□ 1.43
ACTN4-202ENST00000390009 SLFN5Q08AF3 891 aa23.95■■□□□ 1.42
ACTN4-202ENST00000390009 CPSF1Q10570 1443 aaKnown RBP23.94■■□□□ 1.42
ACTN4-202ENST00000390009 RUNDC1Q96C34 613 aa23.94■■□□□ 1.42
ACTN4-202ENST00000390009 ADGRB2O60241 1585 aa23.93■■□□□ 1.42
ACTN4-202ENST00000390009 IQSEC2Q5JU85 1478 aa23.93■■□□□ 1.42
ACTN4-202ENST00000390009 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.93■■□□□ 1.42
ACTN4-202ENST00000390009 THEMISQ8N1K5 641 aaPredicted RBP23.93■■□□□ 1.42
ACTN4-202ENST00000390009 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
ACTN4-202ENST00000390009 TRMT2AQ8IZ69 625 aaKnown RBP23.92■■□□□ 1.42
ACTN4-202ENST00000390009 SLC26A8Q96RN1 970 aa23.92■■□□□ 1.42
ACTN4-202ENST00000390009 CDC42BPGQ6DT37 1551 aa23.92■■□□□ 1.42
ACTN4-202ENST00000390009 COL3A1P02461 1466 aaPredicted RBP23.91■■□□□ 1.42
ACTN4-202ENST00000390009 RIMS1Q86UR5 1692 aaKnown RBP23.91■■□□□ 1.42
ACTN4-202ENST00000390009 MON2Q7Z3U7 1717 aa23.91■■□□□ 1.42
ACTN4-202ENST00000390009 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.91■■□□□ 1.42
ACTN4-202ENST00000390009 EDC4Q6P2E9 1401 aaKnown RBP23.91■■□□□ 1.42
ACTN4-202ENST00000390009 PTPRUQ92729 1446 aa23.91■■□□□ 1.42
ACTN4-202ENST00000390009 CCDC61Q9Y6R9 512 aa23.9■■□□□ 1.42
ACTN4-202ENST00000390009 ITSN1Q15811 1721 aa23.9■■□□□ 1.42
ACTN4-202ENST00000390009 AKAP12Q02952 1782 aa23.9■■□□□ 1.42
ACTN4-202ENST00000390009 SPINK5Q9NQ38 1064 aaPredicted RBP23.89■■□□□ 1.42
ACTN4-202ENST00000390009 CCDC136Q96JN2 1154 aa23.89■■□□□ 1.41
ACTN4-202ENST00000390009 E9PSI1 815 aa23.88■■□□□ 1.41
ACTN4-202ENST00000390009 U2AF1L5P0DN76 240 aaPredicted RBP23.88■■□□□ 1.41
ACTN4-202ENST00000390009 U2AF1Q01081 240 aaKnown RBP eCLIP23.88■■□□□ 1.41
ACTN4-202ENST00000390009 WWC1Q8IX03 1113 aa23.88■■□□□ 1.41
ACTN4-202ENST00000390009 TCP11L2Q8N4U5 519 aa23.88■■□□□ 1.41
ACTN4-202ENST00000390009 DIP2AQ14689 1571 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms