RNA–Protein interactions for RNA: ENST00000389378.6

TNIP1-202, Transcript of TNFAIP3 interacting protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TNIP1, Length 2,935 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP1-202ENST00000389378 RWDD1Q9H446 243 aaPredicted RBP20.77■□□□□ 0.92
TNIP1-202ENST00000389378 NLRP1Q9C000 1473 aa20.77■□□□□ 0.92
TNIP1-202ENST00000389378 PTPRTO14522 1441 aa20.77■□□□□ 0.92
TNIP1-202ENST00000389378 FAM43AQ8N2R8 423 aa20.77■□□□□ 0.92
TNIP1-202ENST00000389378 SAFB2Q14151 953 aaKnown RBP eCLIP20.77■□□□□ 0.91
TNIP1-202ENST00000389378 STAC3Q96MF2 364 aa20.77■□□□□ 0.91
TNIP1-202ENST00000389378 NGEFQ8N5V2 710 aa20.76■□□□□ 0.91
TNIP1-202ENST00000389378 RRAGDQ9NQL2 400 aaPredicted RBP20.75■□□□□ 0.91
TNIP1-202ENST00000389378 CEP152O94986 1710 aa20.75■□□□□ 0.91
TNIP1-202ENST00000389378 ABCC1P33527 1531 aa20.74■□□□□ 0.91
TNIP1-202ENST00000389378 NINLQ9Y2I6 1382 aa20.73■□□□□ 0.91
TNIP1-202ENST00000389378 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
TNIP1-202ENST00000389378 MVPQ14764 893 aaKnown RBP20.72■□□□□ 0.91
TNIP1-202ENST00000389378 PANK2Q9BZ23 570 aa20.72■□□□□ 0.91
TNIP1-202ENST00000389378 SMC4Q9NTJ3 1288 aa20.71■□□□□ 0.91
TNIP1-202ENST00000389378 ITPRIPQ8IWB1 547 aa20.71■□□□□ 0.91
TNIP1-202ENST00000389378 WDR63Q8IWG1 891 aa20.71■□□□□ 0.91
TNIP1-202ENST00000389378 DZIP1LQ8IYY4 767 aaKnown RBP20.71■□□□□ 0.91
TNIP1-202ENST00000389378 CFAP53Q96M91 514 aa20.71■□□□□ 0.91
TNIP1-202ENST00000389378 C22orf23Q9BZE7 217 aa20.71■□□□□ 0.91
TNIP1-202ENST00000389378 VIRMAQ69YN4 1812 aaKnown RBP20.7■□□□□ 0.9
TNIP1-202ENST00000389378 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
TNIP1-202ENST00000389378 EXOSC9Q06265 439 aaKnown RBP20.7■□□□□ 0.9
TNIP1-202ENST00000389378 NOS1P29475 1434 aa20.69■□□□□ 0.9
TNIP1-202ENST00000389378 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
TNIP1-202ENST00000389378 SLC24A1O60721 1099 aa20.69■□□□□ 0.9
TNIP1-202ENST00000389378 CHD1O14646 1710 aa20.69■□□□□ 0.9
TNIP1-202ENST00000389378 CFAP65Q6ZU64 1925 aaKnown RBP20.69■□□□□ 0.9
TNIP1-202ENST00000389378 ABCA6Q8N139 1617 aa20.68■□□□□ 0.9
TNIP1-202ENST00000389378 XRCC6P12956 609 aaKnown RBP eCLIP20.68■□□□□ 0.9
TNIP1-202ENST00000389378 MCM4P33991 863 aa20.68■□□□□ 0.9
TNIP1-202ENST00000389378 L1TD1Q5T7N2 865 aaKnown RBP20.67■□□□□ 0.9
TNIP1-202ENST00000389378 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
TNIP1-202ENST00000389378 CABP2Q9NPB3 220 aa20.67■□□□□ 0.9
TNIP1-202ENST00000389378 ZFYVE16Q7Z3T8 1539 aa20.66■□□□□ 0.9
TNIP1-202ENST00000389378 GOLGA6L3A6NEY3 463 aa20.66■□□□□ 0.9
TNIP1-202ENST00000389378 TRIM27P14373 513 aa20.66■□□□□ 0.9
TNIP1-202ENST00000389378 GGT6Q6P531 493 aa20.66■□□□□ 0.9
TNIP1-202ENST00000389378 SSH1Q8WYL5 1049 aa20.65■□□□□ 0.9
TNIP1-202ENST00000389378 MAP3K4Q9Y6R4 1608 aa20.64■□□□□ 0.9
TNIP1-202ENST00000389378 RSPH6AQ9H0K4 717 aa20.64■□□□□ 0.89
TNIP1-202ENST00000389378 GGNBP2Q9H3C7 697 aa20.63■□□□□ 0.89
TNIP1-202ENST00000389378 ZCCHC11Q5TAX3 1644 aaKnown RBP20.63■□□□□ 0.89
TNIP1-202ENST00000389378 NOB1Q9ULX3 412 aaKnown RBP20.63■□□□□ 0.89
TNIP1-202ENST00000389378 TRAK2O60296 914 aa20.62■□□□□ 0.89
TNIP1-202ENST00000389378 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
TNIP1-202ENST00000389378 TET3O43151 1660 aa20.62■□□□□ 0.89
TNIP1-202ENST00000389378 RTEL1-TNFRSF6BF6WH68 1400 aa20.62■□□□□ 0.89
TNIP1-202ENST00000389378 FOXD4L1Q9NU39 408 aa20.61■□□□□ 0.89
TNIP1-202ENST00000389378 LNPKQ9C0E8 428 aa20.61■□□□□ 0.89
TNIP1-202ENST00000389378 STK26Q9P289 416 aa20.61■□□□□ 0.89
TNIP1-202ENST00000389378 IQSEC2Q5JU85 1478 aa20.61■□□□□ 0.89
TNIP1-202ENST00000389378 AAMPQ13685 434 aa20.6■□□□□ 0.89
TNIP1-202ENST00000389378 TMEM57Q8N5G2 664 aa20.6■□□□□ 0.89
TNIP1-202ENST00000389378 CHMP5Q9NZZ3 219 aa20.6■□□□□ 0.89
TNIP1-202ENST00000389378 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
TNIP1-202ENST00000389378 C14orf93Q9H972 538 aaKnown RBP20.59■□□□□ 0.89
TNIP1-202ENST00000389378 ZNF518AQ6AHZ1 1483 aa20.58■□□□□ 0.89
TNIP1-202ENST00000389378 HSCBQ8IWL3 235 aa20.58■□□□□ 0.89
TNIP1-202ENST00000389378 ATP7AQ04656 1500 aa20.58■□□□□ 0.89
TNIP1-202ENST00000389378 TMPOP42166 694 aaKnown RBP20.57■□□□□ 0.88
TNIP1-202ENST00000389378 ATF7IPQ6VMQ6 1270 aa20.57■□□□□ 0.88
TNIP1-202ENST00000389378 FANCAO15360 1455 aa20.57■□□□□ 0.88
TNIP1-202ENST00000389378 MYOM2P54296 1465 aa20.57■□□□□ 0.88
TNIP1-202ENST00000389378 SHROOM2Q13796 1616 aa20.57■□□□□ 0.88
TNIP1-202ENST00000389378 TRIM35Q9UPQ4 493 aa20.56■□□□□ 0.88
TNIP1-202ENST00000389378 KIAA1210Q9ULL0 1709 aa20.56■□□□□ 0.88
TNIP1-202ENST00000389378 NAP1L5Q96NT1 182 aaPredicted RBP20.56■□□□□ 0.88
TNIP1-202ENST00000389378 DDX19BQ9UMR2 479 aa20.56■□□□□ 0.88
TNIP1-202ENST00000389378 MROH2AA6NES4 1674 aa20.55■□□□□ 0.88
TNIP1-202ENST00000389378 RIPK4P57078 832 aa20.55■□□□□ 0.88
TNIP1-202ENST00000389378 SRPK2P78362 688 aaKnown RBP20.55■□□□□ 0.88
TNIP1-202ENST00000389378 SBNO2Q9Y2G9 1366 aa20.55■□□□□ 0.88
TNIP1-202ENST00000389378 KIF1BO60333 1816 aa20.54■□□□□ 0.88
TNIP1-202ENST00000389378 FSD2A1L4K1 749 aa20.54■□□□□ 0.88
TNIP1-202ENST00000389378 FBLN1P23142 703 aa20.54■□□□□ 0.88
TNIP1-202ENST00000389378 C1orf115Q9H7X2 142 aa20.54■□□□□ 0.88
TNIP1-202ENST00000389378 DEPDC5O75140 1603 aa20.53■□□□□ 0.88
TNIP1-202ENST00000389378 EVC2Q86UK5 1308 aa20.53■□□□□ 0.88
TNIP1-202ENST00000389378 ADGRL1O94910 1474 aa20.53■□□□□ 0.88
TNIP1-202ENST00000389378 HDAC1Q13547 482 aaPredicted RBP20.52■□□□□ 0.88
TNIP1-202ENST00000389378 CD109Q6YHK3 1445 aa20.51■□□□□ 0.87
TNIP1-202ENST00000389378 ELL2O00472 640 aaPredicted RBP20.5■□□□□ 0.87
TNIP1-202ENST00000389378 PLEKHF1Q96S99 279 aa20.5■□□□□ 0.87
TNIP1-202ENST00000389378 SMC5Q8IY18 1101 aa20.5■□□□□ 0.87
TNIP1-202ENST00000389378 HSP90AA1P07900 732 aaKnown RBP20.5■□□□□ 0.87
TNIP1-202ENST00000389378 HSP90AB1P08238 724 aaKnown RBP20.5■□□□□ 0.87
TNIP1-202ENST00000389378 UBE2Q2Q8WVN8 375 aa20.5■□□□□ 0.87
TNIP1-202ENST00000389378 PNNQ9H307 717 aaKnown RBP20.5■□□□□ 0.87
TNIP1-202ENST00000389378 ZBTB40Q9NUA8 1239 aa20.5■□□□□ 0.87
TNIP1-202ENST00000389378 VWDEQ8N2E2 1590 aa20.49■□□□□ 0.87
TNIP1-202ENST00000389378 ANKRD45Q5TZF3 282 aa20.49■□□□□ 0.87
TNIP1-202ENST00000389378 ZNF692Q9BU19 519 aaPredicted RBP20.49■□□□□ 0.87
TNIP1-202ENST00000389378 THUMPD2Q9BTF0 503 aaKnown RBP20.48■□□□□ 0.87
TNIP1-202ENST00000389378 TNPO1Q92973 898 aaKnown RBP20.48■□□□□ 0.87
TNIP1-202ENST00000389378 RBM42Q9BTD8 480 aaKnown RBP20.48■□□□□ 0.87
TNIP1-202ENST00000389378 MINK1Q8N4C8 1332 aaPredicted RBP20.48■□□□□ 0.87
TNIP1-202ENST00000389378 QRICH2Q9H0J4 1663 aa20.48■□□□□ 0.87
TNIP1-202ENST00000389378 MROH1Q8NDA8 1641 aa20.47■□□□□ 0.87
TNIP1-202ENST00000389378 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms