RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 FOXO3O43524 673 aa14.76□□□□□ -0.05
IFT88-203ENST00000389373 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
IFT88-203ENST00000389373 VGFO15240 615 aaPredicted RBP14.74□□□□□ -0.05
IFT88-203ENST00000389373 UNC5CLQ8IV45 518 aa14.74□□□□□ -0.05
IFT88-203ENST00000389373 BLMP54132 1417 aaPredicted RBP14.74□□□□□ -0.05
IFT88-203ENST00000389373 CCDC9Q9Y3X0 531 aaKnown RBP14.73□□□□□ -0.05
IFT88-203ENST00000389373 MYOM2P54296 1465 aa14.73□□□□□ -0.05
IFT88-203ENST00000389373 NEXMIFQ5QGS0 1516 aa14.72□□□□□ -0.05
IFT88-203ENST00000389373 PSDA5PKW4 1024 aaPredicted RBP14.72□□□□□ -0.05
IFT88-203ENST00000389373 HAP1P54257 671 aaPredicted RBP14.72□□□□□ -0.05
IFT88-203ENST00000389373 SPHKAPQ2M3C7 1700 aa14.72□□□□□ -0.05
IFT88-203ENST00000389373 LAMC1P11047 1609 aa14.71□□□□□ -0.05
IFT88-203ENST00000389373 SEPT12Q8IYM1 358 aa14.71□□□□□ -0.05
IFT88-203ENST00000389373 COL22A1Q8NFW1 1626 aaPredicted RBP14.7□□□□□ -0.06
IFT88-203ENST00000389373 RALGAPBQ86X10 1494 aa14.69□□□□□ -0.06
IFT88-203ENST00000389373 A0A0G2JS52 829 aa14.69□□□□□ -0.06
IFT88-203ENST00000389373 MYT1Q01538 1121 aa14.69□□□□□ -0.06
IFT88-203ENST00000389373 STK26Q9P289 416 aa14.69□□□□□ -0.06
IFT88-203ENST00000389373 LRPPRCP42704 1394 aaKnown RBP14.69□□□□□ -0.06
IFT88-203ENST00000389373 HFM1A2PYH4 1435 aa14.68□□□□□ -0.06
IFT88-203ENST00000389373 CLTCL1P53675 1640 aa14.68□□□□□ -0.06
IFT88-203ENST00000389373 WAPLQ7Z5K2 1190 aa14.67□□□□□ -0.06
IFT88-203ENST00000389373 PPARGC1BQ86YN6 1023 aaKnown RBP14.67□□□□□ -0.06
IFT88-203ENST00000389373 PXDNQ92626 1479 aa14.67□□□□□ -0.06
IFT88-203ENST00000389373 BAG6P46379 1132 aa14.66□□□□□ -0.06
IFT88-203ENST00000389373 KRT28Q7Z3Y7 464 aa14.66□□□□□ -0.06
IFT88-203ENST00000389373 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
IFT88-203ENST00000389373 GLI3P10071 1580 aa14.65□□□□□ -0.06
IFT88-203ENST00000389373 LMOD2Q6P5Q4 547 aa14.65□□□□□ -0.06
IFT88-203ENST00000389373 CABLES1Q8TDN4 633 aa14.65□□□□□ -0.06
IFT88-203ENST00000389373 SPATA31A3Q5VYP0 1347 aa14.65□□□□□ -0.06
IFT88-203ENST00000389373 MARF1Q9Y4F3 1742 aaKnown RBP14.64□□□□□ -0.07
IFT88-203ENST00000389373 HRCP23327 699 aa14.64□□□□□ -0.07
IFT88-203ENST00000389373 VPS72Q15906 364 aa14.64□□□□□ -0.07
IFT88-203ENST00000389373 SLIT2O94813 1529 aa14.64□□□□□ -0.07
IFT88-203ENST00000389373 NAIPQ13075 1403 aa14.64□□□□□ -0.07
IFT88-203ENST00000389373 RPGRIP1LQ68CZ1 1315 aa14.64□□□□□ -0.07
IFT88-203ENST00000389373 EP400Q96L91 3159 aa14.63□□□□□ -0.07
IFT88-203ENST00000389373 KIF1BO60333 1816 aa14.63□□□□□ -0.07
IFT88-203ENST00000389373 BRWD3Q6RI45 1802 aa14.62□□□□□ -0.07
IFT88-203ENST00000389373 EN1Q05925 392 aaPredicted RBP14.61□□□□□ -0.07
IFT88-203ENST00000389373 PSME1Q06323 249 aa14.6□□□□□ -0.07
IFT88-203ENST00000389373 R3HDM1Q15032 1099 aaKnown RBP14.6□□□□□ -0.07
IFT88-203ENST00000389373 TMEM132EQ6IEE7 984 aa14.6□□□□□ -0.07
IFT88-203ENST00000389373 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.6□□□□□ -0.07
IFT88-203ENST00000389373 CDC42BPGQ6DT37 1551 aa14.6□□□□□ -0.07
IFT88-203ENST00000389373 LRP5O75197 1615 aa14.59□□□□□ -0.07
IFT88-203ENST00000389373 ONECUT3O60422 494 aaPredicted RBP14.59□□□□□ -0.07
IFT88-203ENST00000389373 FAM98CQ17RN3 349 aaKnown RBP14.59□□□□□ -0.07
IFT88-203ENST00000389373 RGL3Q3MIN7 710 aa14.59□□□□□ -0.07
IFT88-203ENST00000389373 FAM182BQ5T319 152 aa14.59□□□□□ -0.07
IFT88-203ENST00000389373 ADGRF5Q8IZF2 1346 aa14.59□□□□□ -0.07
IFT88-203ENST00000389373 PRAG1Q86YV5 1406 aa14.58□□□□□ -0.07
IFT88-203ENST00000389373 PLEKHH1Q9ULM0 1364 aa14.58□□□□□ -0.08
IFT88-203ENST00000389373 CCDC144AA2RUR9 1427 aa14.58□□□□□ -0.08
IFT88-203ENST00000389373 FAM83GA6ND36 823 aa14.57□□□□□ -0.08
IFT88-203ENST00000389373 SLC4A1APQ9BWU0 796 aaKnown RBP14.57□□□□□ -0.08
IFT88-203ENST00000389373 PHF8Q9UPP1 1060 aa14.57□□□□□ -0.08
IFT88-203ENST00000389373 USP32Q8NFA0 1604 aa14.56□□□□□ -0.08
IFT88-203ENST00000389373 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
IFT88-203ENST00000389373 TNS3Q68CZ2 1445 aa14.54□□□□□ -0.08
IFT88-203ENST00000389373 YY1P25490 414 aa14.53□□□□□ -0.08
IFT88-203ENST00000389373 SAFB2Q14151 953 aaKnown RBP eCLIP14.53□□□□□ -0.08
IFT88-203ENST00000389373 EZH2Q15910 746 aaKnown RBP14.53□□□□□ -0.08
IFT88-203ENST00000389373 PMFBP1Q8TBY8 1022 aa14.53□□□□□ -0.08
IFT88-203ENST00000389373 PPLO60437 1756 aa14.52□□□□□ -0.09
IFT88-203ENST00000389373 ABCC11Q96J66 1382 aa14.51□□□□□ -0.09
IFT88-203ENST00000389373 RRBP1Q9P2E9 1410 aaKnown RBP14.5□□□□□ -0.09
IFT88-203ENST00000389373 KIF1AQ12756 1690 aa14.5□□□□□ -0.09
IFT88-203ENST00000389373 PLCH1Q4KWH8 1693 aa14.5□□□□□ -0.09
IFT88-203ENST00000389373 TECPR2O15040 1411 aa14.49□□□□□ -0.09
IFT88-203ENST00000389373 FMN2Q9NZ56 1722 aa14.49□□□□□ -0.09
IFT88-203ENST00000389373 SBNO1A3KN83 1393 aa14.49□□□□□ -0.09
IFT88-203ENST00000389373 ARHGEF10O15013 1369 aa14.49□□□□□ -0.09
IFT88-203ENST00000389373 TRIM37O94972 964 aa14.48□□□□□ -0.09
IFT88-203ENST00000389373 NWD2Q9ULI1 1742 aa14.48□□□□□ -0.09
IFT88-203ENST00000389373 YTHDC2Q9H6S0 1430 aaKnown RBP14.48□□□□□ -0.09
IFT88-203ENST00000389373 APBA3O96018 575 aa14.47□□□□□ -0.09
IFT88-203ENST00000389373 PRAM1Q96QH2 718 aa14.46□□□□□ -0.09
IFT88-203ENST00000389373 ANKRD30BQ9BXX2 1392 aa14.46□□□□□ -0.1
IFT88-203ENST00000389373 SPATA31A5Q5VU36 1347 aa14.45□□□□□ -0.1
IFT88-203ENST00000389373 SPATA31A7Q8IWB4 1347 aa14.45□□□□□ -0.1
IFT88-203ENST00000389373 SIRT1Q96EB6 747 aa14.45□□□□□ -0.1
IFT88-203ENST00000389373 CAMKK2Q96RR4 588 aa14.45□□□□□ -0.1
IFT88-203ENST00000389373 POGKQ9P215 609 aa14.45□□□□□ -0.1
IFT88-203ENST00000389373 RGPD8O14715 1765 aaPredicted RBP14.45□□□□□ -0.1
IFT88-203ENST00000389373 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
IFT88-203ENST00000389373 DCAF8L1A6NGE4 600 aa14.44□□□□□ -0.1
IFT88-203ENST00000389373 PAK3O75914 559 aaPredicted RBP14.44□□□□□ -0.1
IFT88-203ENST00000389373 CFAP70Q5T0N1 1121 aa14.44□□□□□ -0.1
IFT88-203ENST00000389373 PPP1R1BQ9UD71 204 aaPredicted RBP14.44□□□□□ -0.1
IFT88-203ENST00000389373 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
IFT88-203ENST00000389373 PRDM11Q9NQV5 511 aa14.43□□□□□ -0.1
IFT88-203ENST00000389373 STRN4Q9NRL3 753 aa14.43□□□□□ -0.1
IFT88-203ENST00000389373 DHX57Q6P158 1386 aaKnown RBP14.43□□□□□ -0.1
IFT88-203ENST00000389373 NBPF8Q3BBV2 869 aa14.42□□□□□ -0.1
IFT88-203ENST00000389373 NBPF14Q5TI25 921 aa14.42□□□□□ -0.1
IFT88-203ENST00000389373 FAM196AQ6ZSG2 479 aa14.42□□□□□ -0.1
IFT88-203ENST00000389373 HIRIP3Q9BW71 556 aaPredicted RBP14.42□□□□□ -0.1
IFT88-203ENST00000389373 USP35Q9P2H5 1018 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms