RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 WDR43Q15061 677 aaKnown RBP eCLIP13.59□□□□□ -0.23
LTN1-203ENST00000389195 RRP7AQ9Y3A4 280 aaKnown RBP13.59□□□□□ -0.23
LTN1-203ENST00000389195 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 AGLP35573 1532 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 TULP4Q9NRJ4 1543 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 TNRQ92752 1358 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 PLIN1O60240 522 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 PTPRMP28827 1452 aa13.58□□□□□ -0.24
LTN1-203ENST00000389195 ZRANB1Q9UGI0 708 aa13.57□□□□□ -0.24
LTN1-203ENST00000389195 ALKQ9UM73 1620 aa13.57□□□□□ -0.24
LTN1-203ENST00000389195 PPM1GO15355 546 aaPredicted RBP13.57□□□□□ -0.24
LTN1-203ENST00000389195 MTHFSP49914 203 aa13.57□□□□□ -0.24
LTN1-203ENST00000389195 APAF1O14727 1248 aa13.56□□□□□ -0.24
LTN1-203ENST00000389195 NUDCQ9Y266 331 aa13.56□□□□□ -0.24
LTN1-203ENST00000389195 DMRT2Q9Y5R5 561 aa13.56□□□□□ -0.24
LTN1-203ENST00000389195 SETBP1Q9Y6X0 1596 aa13.56□□□□□ -0.24
LTN1-203ENST00000389195 PPP6R1Q9UPN7 881 aa13.55□□□□□ -0.24
LTN1-203ENST00000389195 ARHGEF28Q8N1W1 1705 aaKnown RBP13.55□□□□□ -0.24
LTN1-203ENST00000389195 A0A1W2PP64 1363 aa13.55□□□□□ -0.24
LTN1-203ENST00000389195 SPINK5Q9NQ38 1064 aaPredicted RBP13.55□□□□□ -0.24
LTN1-203ENST00000389195 SPATA31D1Q6ZQQ2 1576 aa13.54□□□□□ -0.24
LTN1-203ENST00000389195 SOX12O15370 315 aa13.53□□□□□ -0.24
LTN1-203ENST00000389195 SBNO2Q9Y2G9 1366 aa13.52□□□□□ -0.25
LTN1-203ENST00000389195 REREQ9P2R6 1566 aa13.52□□□□□ -0.25
LTN1-203ENST00000389195 FYB1O15117 783 aa13.52□□□□□ -0.25
LTN1-203ENST00000389195 ZFYVE9O95405 1425 aa13.51□□□□□ -0.25
LTN1-203ENST00000389195 PLEKHG5O94827 1062 aa13.51□□□□□ -0.25
LTN1-203ENST00000389195 CGNL1Q0VF96 1302 aa13.51□□□□□ -0.25
LTN1-203ENST00000389195 TMEM2Q9UHN6 1383 aa13.51□□□□□ -0.25
LTN1-203ENST00000389195 MYO3AQ8NEV4 1616 aa13.5□□□□□ -0.25
LTN1-203ENST00000389195 ROBO2Q9HCK4 1378 aa13.49□□□□□ -0.25
LTN1-203ENST00000389195 SMG6Q86US8 1419 aaKnown RBP13.49□□□□□ -0.25
LTN1-203ENST00000389195 U2SURPO15042 1029 aaKnown RBP13.48□□□□□ -0.25
LTN1-203ENST00000389195 NME9Q86XW9 330 aa13.48□□□□□ -0.25
LTN1-203ENST00000389195 PMFBP1Q8TBY8 1022 aa13.48□□□□□ -0.25
LTN1-203ENST00000389195 DNAJC5Q9H3Z4 198 aa13.48□□□□□ -0.25
LTN1-203ENST00000389195 ANKRD36BQ8N2N9 1353 aa13.47□□□□□ -0.25
LTN1-203ENST00000389195 WASLO00401 505 aaPredicted RBP13.47□□□□□ -0.25
LTN1-203ENST00000389195 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
LTN1-203ENST00000389195 SLC24A1O60721 1099 aa13.47□□□□□ -0.25
LTN1-203ENST00000389195 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
LTN1-203ENST00000389195 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTN1-203ENST00000389195 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.47□□□□□ -0.25
LTN1-203ENST00000389195 NUDT16Q96DE0 195 aaKnown RBP13.47□□□□□ -0.25
LTN1-203ENST00000389195 C20orf194Q5TEA3 1177 aa13.46□□□□□ -0.25
LTN1-203ENST00000389195 AMOTL2Q9Y2J4 779 aa13.46□□□□□ -0.25
LTN1-203ENST00000389195 PRR36Q9H6K5 1346 aa13.46□□□□□ -0.26
LTN1-203ENST00000389195 TSHZ2Q9NRE2 1034 aa13.46□□□□□ -0.26
LTN1-203ENST00000389195 NRXN3Q9Y4C0 1643 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 TERF2IPQ9NYB0 399 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 EID1Q9Y6B2 187 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 RRS1Q15050 365 aaKnown RBP13.45□□□□□ -0.26
LTN1-203ENST00000389195 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
LTN1-203ENST00000389195 BLMP54132 1417 aaPredicted RBP13.44□□□□□ -0.26
LTN1-203ENST00000389195 HDGFL2Q7Z4V5 671 aaPredicted RBP13.44□□□□□ -0.26
LTN1-203ENST00000389195 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 NUTM2GQ5VZR2 741 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 C3P01024 1663 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 PTPRUQ92729 1446 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 UBR1Q8IWV7 1749 aa13.43□□□□□ -0.26
LTN1-203ENST00000389195 HDGFP51858 240 aaKnown RBP13.42□□□□□ -0.26
LTN1-203ENST00000389195 TCP11L2Q8N4U5 519 aa13.42□□□□□ -0.26
LTN1-203ENST00000389195 ABCC11Q96J66 1382 aa13.42□□□□□ -0.26
LTN1-203ENST00000389195 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
LTN1-203ENST00000389195 KCNA6P17658 529 aa13.42□□□□□ -0.26
LTN1-203ENST00000389195 HMOX1P09601 288 aa13.41□□□□□ -0.26
LTN1-203ENST00000389195 DUSP27Q5VZP5 1158 aa13.41□□□□□ -0.26
LTN1-203ENST00000389195 PPIP5K1Q6PFW1 1433 aa13.41□□□□□ -0.26
LTN1-203ENST00000389195 RRP1P56182 461 aaKnown RBP13.41□□□□□ -0.26
LTN1-203ENST00000389195 ATAD2Q6PL18 1390 aa13.4□□□□□ -0.26
LTN1-203ENST00000389195 SETD1AO15047 1707 aaKnown RBP13.4□□□□□ -0.26
LTN1-203ENST00000389195 BCAR3O75815 825 aa13.4□□□□□ -0.26
LTN1-203ENST00000389195 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
LTN1-203ENST00000389195 THEMISQ8N1K5 641 aaPredicted RBP13.4□□□□□ -0.26
LTN1-203ENST00000389195 PPP4R2Q9NY27 417 aa13.4□□□□□ -0.26
LTN1-203ENST00000389195 BCL2L13Q9BXK5 485 aa13.4□□□□□ -0.27
LTN1-203ENST00000389195 FER1L4A9Z1Z3 1794 aa13.39□□□□□ -0.27
LTN1-203ENST00000389195 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
LTN1-203ENST00000389195 WWC1Q8IX03 1113 aa13.38□□□□□ -0.27
LTN1-203ENST00000389195 CCDC136Q96JN2 1154 aa13.38□□□□□ -0.27
LTN1-203ENST00000389195 POLKQ9UBT6 870 aa13.38□□□□□ -0.27
LTN1-203ENST00000389195 ACEP12821 1306 aa13.37□□□□□ -0.27
LTN1-203ENST00000389195 ZNF521Q96K83 1311 aa13.37□□□□□ -0.27
LTN1-203ENST00000389195 POLR3AO14802 1390 aaPredicted RBP13.36□□□□□ -0.27
LTN1-203ENST00000389195 SLFN5Q08AF3 891 aa13.36□□□□□ -0.27
LTN1-203ENST00000389195 CFAP53Q96M91 514 aa13.36□□□□□ -0.27
LTN1-203ENST00000389195 TSR2Q969E8 191 aaKnown RBP13.36□□□□□ -0.27
LTN1-203ENST00000389195 CRBNQ96SW2 442 aa13.35□□□□□ -0.27
LTN1-203ENST00000389195 THUMPD2Q9BTF0 503 aaKnown RBP13.35□□□□□ -0.27
LTN1-203ENST00000389195 RNF123Q5XPI4 1314 aa13.35□□□□□ -0.27
LTN1-203ENST00000389195 RIMS1Q86UR5 1692 aaKnown RBP13.35□□□□□ -0.27
LTN1-203ENST00000389195 PLEKHG1Q9ULL1 1385 aa13.35□□□□□ -0.27
LTN1-203ENST00000389195 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
LTN1-203ENST00000389195 PUS7Q96PZ0 661 aaKnown RBP13.34□□□□□ -0.27
LTN1-203ENST00000389195 TNNQ9UQP3 1299 aa13.34□□□□□ -0.27
LTN1-203ENST00000389195 NLRP1Q9C000 1473 aa13.34□□□□□ -0.27
LTN1-203ENST00000389195 PDE3BQ13370 1112 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms