RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 MORC1Q86VD1 984 aa19.61■□□□□ 0.73
SCFD2-201ENST00000388940 NKTRP30414 1462 aaKnown RBP19.61■□□□□ 0.73
SCFD2-201ENST00000388940 TMEM131LA2VDJ0 1609 aa19.6■□□□□ 0.73
SCFD2-201ENST00000388940 E9PSI1 815 aa19.6■□□□□ 0.73
SCFD2-201ENST00000388940 MYO5BQ9ULV0 1848 aa19.6■□□□□ 0.73
SCFD2-201ENST00000388940 NSD2O96028 1365 aa19.58■□□□□ 0.73
SCFD2-201ENST00000388940 ANKRD36BQ8N2N9 1353 aa19.58■□□□□ 0.73
SCFD2-201ENST00000388940 CGNL1Q0VF96 1302 aa19.58■□□□□ 0.72
SCFD2-201ENST00000388940 C20orf194Q5TEA3 1177 aa19.57■□□□□ 0.72
SCFD2-201ENST00000388940 ANP32AP39687 249 aaKnown RBP19.57■□□□□ 0.72
SCFD2-201ENST00000388940 NINLQ9Y2I6 1382 aa19.55■□□□□ 0.72
SCFD2-201ENST00000388940 SPINK5Q9NQ38 1064 aaPredicted RBP19.55■□□□□ 0.72
SCFD2-201ENST00000388940 IPO9Q96P70 1041 aaKnown RBP19.55■□□□□ 0.72
SCFD2-201ENST00000388940 NOP58Q9Y2X3 529 aaKnown RBP19.55■□□□□ 0.72
SCFD2-201ENST00000388940 KDM2BQ8NHM5 1336 aa19.54■□□□□ 0.72
SCFD2-201ENST00000388940 REREQ9P2R6 1566 aa19.54■□□□□ 0.72
SCFD2-201ENST00000388940 NUTM2DQ5VT03 806 aaPredicted RBP19.53■□□□□ 0.72
SCFD2-201ENST00000388940 PDE4AP27815 886 aa19.53■□□□□ 0.72
SCFD2-201ENST00000388940 NCBP3Q53F19 620 aaKnown RBP19.52■□□□□ 0.72
SCFD2-201ENST00000388940 RUNDC1Q96C34 613 aa19.52■□□□□ 0.72
SCFD2-201ENST00000388940 BACH2Q9BYV9 841 aa19.52■□□□□ 0.72
SCFD2-201ENST00000388940 IQSEC2Q5JU85 1478 aa19.52■□□□□ 0.71
SCFD2-201ENST00000388940 CENPQQ7L2Z9 268 aaPredicted RBP19.51■□□□□ 0.71
SCFD2-201ENST00000388940 WWC1Q8IX03 1113 aa19.51■□□□□ 0.71
SCFD2-201ENST00000388940 CLTCQ00610 1675 aaKnown RBP19.51■□□□□ 0.71
SCFD2-201ENST00000388940 DIP2BQ9P265 1576 aa19.51■□□□□ 0.71
SCFD2-201ENST00000388940 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
SCFD2-201ENST00000388940 AGLP35573 1532 aa19.5■□□□□ 0.71
SCFD2-201ENST00000388940 PTPRMP28827 1452 aa19.5■□□□□ 0.71
SCFD2-201ENST00000388940 CFAP53Q96M91 514 aa19.5■□□□□ 0.71
SCFD2-201ENST00000388940 PHF23Q9BUL5 403 aaPredicted RBP19.5■□□□□ 0.71
SCFD2-201ENST00000388940 MTHFSP49914 203 aa19.49■□□□□ 0.71
SCFD2-201ENST00000388940 DMRT2Q9Y5R5 561 aa19.48■□□□□ 0.71
SCFD2-201ENST00000388940 CYB5RLQ6IPT4 315 aa19.48■□□□□ 0.71
SCFD2-201ENST00000388940 CABP2Q9NPB3 220 aa19.48■□□□□ 0.71
SCFD2-201ENST00000388940 ABCC11Q96J66 1382 aa19.47■□□□□ 0.71
SCFD2-201ENST00000388940 CCDC27Q2M243 656 aa19.47■□□□□ 0.71
SCFD2-201ENST00000388940 ATAD2Q6PL18 1390 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 YTHDC2Q9H6S0 1430 aaKnown RBP19.46■□□□□ 0.71
SCFD2-201ENST00000388940 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
SCFD2-201ENST00000388940 WDR63Q8IWG1 891 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 RIMBP3CA6NJZ7 1639 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 RIMBP3BA6NNM3 1639 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 RIMBP3Q9UFD9 1639 aa19.46■□□□□ 0.71
SCFD2-201ENST00000388940 ALKQ9UM73 1620 aa19.45■□□□□ 0.7
SCFD2-201ENST00000388940 TCP11L2Q8N4U5 519 aa19.45■□□□□ 0.7
SCFD2-201ENST00000388940 MED14O60244 1454 aa19.45■□□□□ 0.7
SCFD2-201ENST00000388940 BCAR3O75815 825 aa19.44■□□□□ 0.7
SCFD2-201ENST00000388940 PAK3O75914 559 aaPredicted RBP19.44■□□□□ 0.7
SCFD2-201ENST00000388940 FAM69CQ0P6D2 419 aa19.44■□□□□ 0.7
SCFD2-201ENST00000388940 PDE3AQ14432 1141 aa19.44■□□□□ 0.7
SCFD2-201ENST00000388940 ZBTB47Q9UFB7 747 aaPredicted RBP19.44■□□□□ 0.7
SCFD2-201ENST00000388940 A0A1W2PP64 1363 aa19.44■□□□□ 0.7
SCFD2-201ENST00000388940 FBXO31Q5XUX0 539 aaPredicted RBP19.43■□□□□ 0.7
SCFD2-201ENST00000388940 STK26Q9P289 416 aa19.43■□□□□ 0.7
SCFD2-201ENST00000388940 ADGRB2O60241 1585 aa19.42■□□□□ 0.7
SCFD2-201ENST00000388940 SRPK2P78362 688 aaKnown RBP19.41■□□□□ 0.7
SCFD2-201ENST00000388940 TSPOAP1O95153 1857 aa19.41■□□□□ 0.7
SCFD2-201ENST00000388940 SPATA31D1Q6ZQQ2 1576 aa19.4■□□□□ 0.7
SCFD2-201ENST00000388940 SAFB2Q14151 953 aaKnown RBP eCLIP19.4■□□□□ 0.72e-6■■■■□ 23.6
SCFD2-201ENST00000388940 TERF2IPQ9NYB0 399 aa19.4■□□□□ 0.7
SCFD2-201ENST00000388940 CD163L1Q9NR16 1453 aa19.4■□□□□ 0.7
SCFD2-201ENST00000388940 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
SCFD2-201ENST00000388940 PRAM1Q96QH2 718 aa19.4■□□□□ 0.7
SCFD2-201ENST00000388940 POGKQ9P215 609 aa19.39■□□□□ 0.69
SCFD2-201ENST00000388940 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
SCFD2-201ENST00000388940 COL3A1P02461 1466 aaPredicted RBP19.37■□□□□ 0.69
SCFD2-201ENST00000388940 NLRP1Q9C000 1473 aa19.37■□□□□ 0.69
SCFD2-201ENST00000388940 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
SCFD2-201ENST00000388940 A2ML1A8K2U0 1454 aa19.37■□□□□ 0.69
SCFD2-201ENST00000388940 MINK1Q8N4C8 1332 aaPredicted RBP19.37■□□□□ 0.69
SCFD2-201ENST00000388940 SETD1AO15047 1707 aaKnown RBP19.36■□□□□ 0.69
SCFD2-201ENST00000388940 AAMPQ13685 434 aa19.36■□□□□ 0.69
SCFD2-201ENST00000388940 NEUROD2Q15784 382 aa19.36■□□□□ 0.69
SCFD2-201ENST00000388940 FYB1O15117 783 aa19.35■□□□□ 0.69
SCFD2-201ENST00000388940 U2AF1L5P0DN76 240 aaPredicted RBP19.35■□□□□ 0.69
SCFD2-201ENST00000388940 RARSP54136 660 aaKnown RBP19.35■□□□□ 0.69
SCFD2-201ENST00000388940 U2AF1Q01081 240 aaKnown RBP eCLIP19.35■□□□□ 0.69
SCFD2-201ENST00000388940 SKAP1Q86WV1 359 aa19.35■□□□□ 0.69
SCFD2-201ENST00000388940 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
SCFD2-201ENST00000388940 KIF20BQ96Q89 1820 aa19.35■□□□□ 0.69
SCFD2-201ENST00000388940 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
SCFD2-201ENST00000388940 CDK19Q9BWU1 502 aa19.33■□□□□ 0.69
SCFD2-201ENST00000388940 HDGFL2Q7Z4V5 671 aaPredicted RBP19.33■□□□□ 0.68
SCFD2-201ENST00000388940 NPM2Q86SE8 214 aaKnown RBP19.33■□□□□ 0.68
SCFD2-201ENST00000388940 GGNBP2Q9H3C7 697 aa19.33■□□□□ 0.68
SCFD2-201ENST00000388940 RIMS2Q9UQ26 1411 aa19.32■□□□□ 0.68
SCFD2-201ENST00000388940 PLEKHF1Q96S99 279 aa19.32■□□□□ 0.68
SCFD2-201ENST00000388940 FAM161AQ3B820 660 aa19.31■□□□□ 0.68
SCFD2-201ENST00000388940 CT47B1P0C2W7 299 aaPredicted RBP19.31■□□□□ 0.68
SCFD2-201ENST00000388940 CANXP27824 592 aaKnown RBP19.31■□□□□ 0.68
SCFD2-201ENST00000388940 CLUAP1Q96AJ1 413 aa19.31■□□□□ 0.68
SCFD2-201ENST00000388940 PNPLA6Q8IY17 1366 aa19.3■□□□□ 0.68
SCFD2-201ENST00000388940 DDRGK1Q96HY6 314 aa19.29■□□□□ 0.68
SCFD2-201ENST00000388940 ATP7BP35670 1465 aa19.29■□□□□ 0.68
SCFD2-201ENST00000388940 PANK1Q8TE04 598 aa19.28■□□□□ 0.68
SCFD2-201ENST00000388940 C8orf34Q49A92 452 aa19.28■□□□□ 0.68
SCFD2-201ENST00000388940 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
SCFD2-201ENST00000388940 IGHDP01880 384 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms