RNA–Protein interactions for RNA: ENST00000383974.1

RNU6-1040P-201, Transcript of RNA, U6 small nuclear 1040, pseudogene, humanhuman

BASIC

Gene RNU6-1040P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1040P-201ENST00000383974 LMOD2Q6P5Q4 547 aa7.14□□□□□ -1.27
RNU6-1040P-201ENST00000383974 CD2BP2O95400 341 aaKnown RBP7.13□□□□□ -1.27
RNU6-1040P-201ENST00000383974 CLCN1P35523 988 aa7.13□□□□□ -1.27
RNU6-1040P-201ENST00000383974 USP46P62068 366 aa7.13□□□□□ -1.27
RNU6-1040P-201ENST00000383974 FAM217BQ9NTX9 383 aaPredicted RBP7.13□□□□□ -1.27
RNU6-1040P-201ENST00000383974 ZBTB24O43167 697 aaPredicted RBP7.12□□□□□ -1.27
RNU6-1040P-201ENST00000383974 MMP16P51512 607 aa7.12□□□□□ -1.27
RNU6-1040P-201ENST00000383974 GUCA2AQ02747 115 aa7.12□□□□□ -1.27
RNU6-1040P-201ENST00000383974 USB1Q9BQ65 265 aaKnown RBP7.12□□□□□ -1.27
RNU6-1040P-201ENST00000383974 ST8SIA5O15466 376 aa7.11□□□□□ -1.27
RNU6-1040P-201ENST00000383974 DXOO77932 396 aaKnown RBP7.11□□□□□ -1.27
RNU6-1040P-201ENST00000383974 TRIM32Q13049 653 aa7.1□□□□□ -1.27
RNU6-1040P-201ENST00000383974 REPIN1Q9BWE0 567 aaKnown RBP7.1□□□□□ -1.27
RNU6-1040P-201ENST00000383974 TOR4AQ9NXH8 423 aa7.1□□□□□ -1.27
RNU6-1040P-201ENST00000383974 POTECB2RU33 542 aa7.09□□□□□ -1.27
RNU6-1040P-201ENST00000383974 CYP4X1Q8N118 509 aa7.09□□□□□ -1.27
RNU6-1040P-201ENST00000383974 KRI1Q8N9T8 703 aaKnown RBP7.09□□□□□ -1.27
RNU6-1040P-201ENST00000383974 AAASQ9NRG9 546 aa7.09□□□□□ -1.27
RNU6-1040P-201ENST00000383974 NUTM1Q86Y26 1132 aa7.08□□□□□ -1.28
RNU6-1040P-201ENST00000383974 SYMPKQ92797 1274 aaKnown RBP7.08□□□□□ -1.28
RNU6-1040P-201ENST00000383974 ZNF775Q96BV0 537 aaPredicted RBP7.08□□□□□ -1.28
RNU6-1040P-201ENST00000383974 WNT7AO00755 349 aa7.07□□□□□ -1.28
RNU6-1040P-201ENST00000383974 ZMYND10O75800 440 aa7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 AVPP01185 164 aa7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 TTLL12Q14166 644 aaPredicted RBP7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 BARGINQ6ZT62 677 aa7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 CRIPAKQ8N1N5 446 aa7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 CCDC24Q8N4L8 307 aa7.06□□□□□ -1.28
RNU6-1040P-201ENST00000383974 TTC24A2A3L6 582 aaPredicted RBP7.05□□□□□ -1.28
RNU6-1040P-201ENST00000383974 JUNDP17535 347 aa7.05□□□□□ -1.28
RNU6-1040P-201ENST00000383974 SSTR3P32745 418 aaPredicted RBP7.05□□□□□ -1.28
RNU6-1040P-201ENST00000383974 ZC3H15Q8WU90 426 aaKnown RBP7.05□□□□□ -1.28
RNU6-1040P-201ENST00000383974 FDX1P10109 184 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 AMHR2Q16671 573 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 RETREG3Q86VR2 466 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 MRGPRX2Q96LB1 330 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 DACH1Q9UI36 760 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 PCDHGC3Q9UN70 934 aa7.04□□□□□ -1.28
RNU6-1040P-201ENST00000383974 SMPD1P17405 629 aa7.03□□□□□ -1.28
RNU6-1040P-201ENST00000383974 GIGYF2Q6Y7W6 1299 aaKnown RBP7.03□□□□□ -1.28
RNU6-1040P-201ENST00000383974 SPIRE2Q8WWL2 714 aa7.03□□□□□ -1.28
RNU6-1040P-201ENST00000383974 C6orf229H3BNL8 230 aa7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 AXIN1O15169 862 aa7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 SKOR1P84550 965 aa7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 CTC1Q2NKJ3 1217 aa7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 SNIP1Q8TAD8 396 aaKnown RBP7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 NUDT12Q9BQG2 462 aa7.02□□□□□ -1.29
RNU6-1040P-201ENST00000383974 J3QL48 77 aa7.01□□□□□ -1.29
RNU6-1040P-201ENST00000383974 NDUFV2P19404 249 aa7.01□□□□□ -1.29
RNU6-1040P-201ENST00000383974 WNT7BP56706 349 aa7.01□□□□□ -1.29
RNU6-1040P-201ENST00000383974 MOXD2PA6NHM9 499 aa7□□□□□ -1.29
RNU6-1040P-201ENST00000383974 SMCPP49901 116 aaPredicted RBP7□□□□□ -1.29
RNU6-1040P-201ENST00000383974 RC3H1Q5TC82 1133 aaKnown RBP7□□□□□ -1.29
RNU6-1040P-201ENST00000383974 PTCRAQ6ISU1 281 aaPredicted RBP6.99□□□□□ -1.29
RNU6-1040P-201ENST00000383974 GMPR2Q9P2T1 348 aaKnown RBP6.99□□□□□ -1.29
RNU6-1040P-201ENST00000383974 CCNYL3P0C7X3 344 aa6.98□□□□□ -1.29
RNU6-1040P-201ENST00000383974 MS4A1P11836 297 aa6.98□□□□□ -1.29
RNU6-1040P-201ENST00000383974 PARP9Q8IXQ6 854 aa6.98□□□□□ -1.29
RNU6-1040P-201ENST00000383974 BEGAINQ9BUH8 593 aa6.98□□□□□ -1.29
RNU6-1040P-201ENST00000383974 PTPRNQ16849 979 aa6.97□□□□□ -1.29
RNU6-1040P-201ENST00000383974 HPS1Q92902 700 aa6.97□□□□□ -1.29
RNU6-1040P-201ENST00000383974 TRIM66O15016 1216 aa6.96□□□□□ -1.3
RNU6-1040P-201ENST00000383974 MTMR2Q13614 643 aa6.96□□□□□ -1.3
RNU6-1040P-201ENST00000383974 PRR7Q8TB68 274 aa6.96□□□□□ -1.3
RNU6-1040P-201ENST00000383974 C11orf95C9JLR9 678 aaPredicted RBP6.95□□□□□ -1.3
RNU6-1040P-201ENST00000383974 ALDH1A1P00352 501 aa6.95□□□□□ -1.3
RNU6-1040P-201ENST00000383974 EHBP1Q8NDI1 1231 aa6.95□□□□□ -1.3
RNU6-1040P-201ENST00000383974 TBC1D2Q9BYX2 928 aa6.95□□□□□ -1.3
RNU6-1040P-201ENST00000383974 ATP13A2Q9NQ11 1180 aa6.95□□□□□ -1.3
RNU6-1040P-201ENST00000383974 SH3BP2P78314 561 aa6.94□□□□□ -1.3
RNU6-1040P-201ENST00000383974 RSBN1LQ6PCB5 846 aaPredicted RBP6.94□□□□□ -1.3
RNU6-1040P-201ENST00000383974 UNC93B1Q9H1C4 597 aa6.94□□□□□ -1.3
RNU6-1040P-201ENST00000383974 EVA1BQ9NVM1 165 aa6.94□□□□□ -1.3
RNU6-1040P-201ENST00000383974 SPDYE5A6NIY4 337 aa6.93□□□□□ -1.3
RNU6-1040P-201ENST00000383974 LINC01559Q495D7 138 aa6.93□□□□□ -1.3
RNU6-1040P-201ENST00000383974 DESI1Q6ICB0 168 aa6.93□□□□□ -1.3
RNU6-1040P-201ENST00000383974 AK7Q96M32 723 aa6.93□□□□□ -1.3
RNU6-1040P-201ENST00000383974 SIAH2O43255 324 aa6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 GJA5P36382 358 aa6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 KCNH2Q12809 1159 aa6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 TREML4Q6UXN2 200 aa6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 PCDHB15Q9Y5E8 787 aa6.92□□□□□ -1.3
RNU6-1040P-201ENST00000383974 CFAP99D6REC4 459 aa6.91□□□□□ -1.3
RNU6-1040P-201ENST00000383974 DIXDC1Q155Q3 683 aa6.91□□□□□ -1.3
RNU6-1040P-201ENST00000383974 BAP1Q92560 729 aa6.91□□□□□ -1.3
RNU6-1040P-201ENST00000383974 SPTLC1O15269 473 aa6.9□□□□□ -1.3
RNU6-1040P-201ENST00000383974 SNRPBP14678 240 aaKnown RBP6.9□□□□□ -1.3
RNU6-1040P-201ENST00000383974 HRCP23327 699 aa6.9□□□□□ -1.3
RNU6-1040P-201ENST00000383974 TRIM47Q96LD4 638 aa6.9□□□□□ -1.3
RNU6-1040P-201ENST00000383974 TLL2Q9Y6L7 1015 aa6.9□□□□□ -1.3
RNU6-1040P-201ENST00000383974 PDE4DQ08499 809 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 LYPD8Q6UX82 237 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 ZNF511Q8NB15 262 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 ZBTB3Q9H5J0 574 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 SENP2Q9HC62 589 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 WASF2Q9Y6W5 498 aa6.89□□□□□ -1.31
RNU6-1040P-201ENST00000383974 BMP1P13497 986 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 CTHP32929 405 aa6.88□□□□□ -1.31
RNU6-1040P-201ENST00000383974 NFX1Q12986 1120 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms