RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 CDCA8Q53HL2 280 aa18.31■□□□□ 0.52
NEK4-202ENST00000383721 PPLO60437 1756 aa18.3■□□□□ 0.52
NEK4-202ENST00000383721 IPO9Q96P70 1041 aaKnown RBP18.3■□□□□ 0.52
NEK4-202ENST00000383721 IFT172Q9UG01 1749 aa18.3■□□□□ 0.52
NEK4-202ENST00000383721 TCERG1O14776 1098 aaKnown RBP18.29■□□□□ 0.52
NEK4-202ENST00000383721 ARHGAP23Q9P227 1491 aa18.29■□□□□ 0.52
NEK4-202ENST00000383721 RPGRIP1LQ68CZ1 1315 aa18.29■□□□□ 0.52
NEK4-202ENST00000383721 TXNDC2Q86VQ3 553 aa18.29■□□□□ 0.52
NEK4-202ENST00000383721 SLIT1O75093 1534 aa18.29■□□□□ 0.52
NEK4-202ENST00000383721 PLEKHH1Q9ULM0 1364 aa18.27■□□□□ 0.52
NEK4-202ENST00000383721 CRBNQ96SW2 442 aa18.27■□□□□ 0.51
NEK4-202ENST00000383721 ASXL1Q8IXJ9 1541 aa18.26■□□□□ 0.51
NEK4-202ENST00000383721 WDR43Q15061 677 aaKnown RBP eCLIP18.26■□□□□ 0.51
NEK4-202ENST00000383721 NCKAP5LQ9HCH0 1330 aa18.25■□□□□ 0.51
NEK4-202ENST00000383721 VGFO15240 615 aaPredicted RBP18.25■□□□□ 0.51
NEK4-202ENST00000383721 EIF3AQ14152 1382 aaKnown RBP18.25■□□□□ 0.51
NEK4-202ENST00000383721 AEBP2Q6ZN18 517 aaPredicted RBP18.25■□□□□ 0.51
NEK4-202ENST00000383721 EID1Q9Y6B2 187 aa18.25■□□□□ 0.51
NEK4-202ENST00000383721 MYOM2P54296 1465 aa18.25■□□□□ 0.51
NEK4-202ENST00000383721 PIK3C2GO75747 1445 aa18.24■□□□□ 0.51
NEK4-202ENST00000383721 ZNF521Q96K83 1311 aa18.24■□□□□ 0.51
NEK4-202ENST00000383721 NPC1L1Q9UHC9 1359 aa18.24■□□□□ 0.51
NEK4-202ENST00000383721 ANKLE2Q86XL3 938 aa18.24■□□□□ 0.51
NEK4-202ENST00000383721 MYOM1P52179 1685 aa18.23■□□□□ 0.51
NEK4-202ENST00000383721 DUSP27Q5VZP5 1158 aa18.23■□□□□ 0.51
NEK4-202ENST00000383721 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.23■□□□□ 0.51
NEK4-202ENST00000383721 PDE4AP27815 886 aa18.23■□□□□ 0.51
NEK4-202ENST00000383721 CFAP70Q5T0N1 1121 aa18.23■□□□□ 0.51
NEK4-202ENST00000383721 NRXN1Q9ULB1 1477 aa18.22■□□□□ 0.51
NEK4-202ENST00000383721 MS4A1P11836 297 aa18.22■□□□□ 0.51
NEK4-202ENST00000383721 C20orf194Q5TEA3 1177 aa18.22■□□□□ 0.51
NEK4-202ENST00000383721 BCL11AQ9H165 835 aa18.22■□□□□ 0.51
NEK4-202ENST00000383721 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
NEK4-202ENST00000383721 ZBTB47Q9UFB7 747 aaPredicted RBP18.21■□□□□ 0.51
NEK4-202ENST00000383721 HDGFP51858 240 aaKnown RBP18.21■□□□□ 0.51
NEK4-202ENST00000383721 BACH2Q9BYV9 841 aa18.21■□□□□ 0.51
NEK4-202ENST00000383721 SLC26A8Q96RN1 970 aa18.19■□□□□ 0.5
NEK4-202ENST00000383721 GOLGA2Q08379 1002 aa18.19■□□□□ 0.5
NEK4-202ENST00000383721 NBR1Q14596 966 aa18.18■□□□□ 0.5
NEK4-202ENST00000383721 PLEKHG1Q9ULL1 1385 aa18.18■□□□□ 0.5
NEK4-202ENST00000383721 NRXN3Q9Y4C0 1643 aa18.18■□□□□ 0.5
NEK4-202ENST00000383721 SKAP1Q86WV1 359 aa18.17■□□□□ 0.5
NEK4-202ENST00000383721 STRCQ7RTU9 1775 aa18.16■□□□□ 0.5
NEK4-202ENST00000383721 TMEM132EQ6IEE7 984 aa18.16■□□□□ 0.5
NEK4-202ENST00000383721 NPM2Q86SE8 214 aaKnown RBP18.16■□□□□ 0.5
NEK4-202ENST00000383721 ADAMTS13Q76LX8 1427 aa18.16■□□□□ 0.5
NEK4-202ENST00000383721 CCDC146Q8IYE0 955 aa18.16■□□□□ 0.5
NEK4-202ENST00000383721 CARD14Q9BXL6 1004 aa18.16■□□□□ 0.5
NEK4-202ENST00000383721 C14orf93Q9H972 538 aaKnown RBP18.16■□□□□ 0.5
NEK4-202ENST00000383721 SLC24A1O60721 1099 aa18.15■□□□□ 0.5
NEK4-202ENST00000383721 SLFN5Q08AF3 891 aa18.15■□□□□ 0.5
NEK4-202ENST00000383721 NPHP4O75161 1426 aaPredicted RBP18.15■□□□□ 0.5
NEK4-202ENST00000383721 ALKQ9UM73 1620 aa18.15■□□□□ 0.5
NEK4-202ENST00000383721 SETBP1Q9Y6X0 1596 aa18.15■□□□□ 0.5
NEK4-202ENST00000383721 KDM2BQ8NHM5 1336 aa18.14■□□□□ 0.49
NEK4-202ENST00000383721 TRMT2AQ8IZ69 625 aaKnown RBP18.14■□□□□ 0.49
NEK4-202ENST00000383721 MED14O60244 1454 aa18.13■□□□□ 0.49
NEK4-202ENST00000383721 METP08581 1390 aa18.13■□□□□ 0.49
NEK4-202ENST00000383721 APAF1O14727 1248 aa18.12■□□□□ 0.49
NEK4-202ENST00000383721 DEKP35659 375 aaKnown RBP18.12■□□□□ 0.49
NEK4-202ENST00000383721 SPINK5Q9NQ38 1064 aaPredicted RBP18.12■□□□□ 0.49
NEK4-202ENST00000383721 SETD1AO15047 1707 aaKnown RBP18.11■□□□□ 0.49
NEK4-202ENST00000383721 SBNO2Q9Y2G9 1366 aa18.1■□□□□ 0.49
NEK4-202ENST00000383721 ADGRB1O14514 1584 aa18.09■□□□□ 0.49
NEK4-202ENST00000383721 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.08■□□□□ 0.49
NEK4-202ENST00000383721 STK26Q9P289 416 aa18.08■□□□□ 0.49
NEK4-202ENST00000383721 CENPQQ7L2Z9 268 aaPredicted RBP18.08■□□□□ 0.48
NEK4-202ENST00000383721 TBX22Q9Y458 520 aa18.08■□□□□ 0.48
NEK4-202ENST00000383721 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
NEK4-202ENST00000383721 PTPRUQ92729 1446 aa18.06■□□□□ 0.48
NEK4-202ENST00000383721 NKTRP30414 1462 aaKnown RBP18.06■□□□□ 0.48
NEK4-202ENST00000383721 DMRT2Q9Y5R5 561 aa18.05■□□□□ 0.48
NEK4-202ENST00000383721 TRAK1Q9UPV9 953 aa18.05■□□□□ 0.48
NEK4-202ENST00000383721 E9PSI1 815 aa18.04■□□□□ 0.48
NEK4-202ENST00000383721 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
NEK4-202ENST00000383721 YTHDC2Q9H6S0 1430 aaKnown RBP18.04■□□□□ 0.48
NEK4-202ENST00000383721 DIP2AQ14689 1571 aa18.03■□□□□ 0.48
NEK4-202ENST00000383721 BCAR3O75815 825 aa18.03■□□□□ 0.48
NEK4-202ENST00000383721 NGEFQ8N5V2 710 aa18.02■□□□□ 0.48
NEK4-202ENST00000383721 AMOTL2Q9Y2J4 779 aa18.02■□□□□ 0.47
NEK4-202ENST00000383721 NSD3Q9BZ95 1437 aa18.01■□□□□ 0.47
NEK4-202ENST00000383721 KCNA6P17658 529 aa18■□□□□ 0.47
NEK4-202ENST00000383721 RTL5Q5HYW3 569 aaPredicted RBP18■□□□□ 0.47
NEK4-202ENST00000383721 SLC12A5Q9H2X9 1139 aa18■□□□□ 0.47
NEK4-202ENST00000383721 RBM33Q96EV2 1170 aaKnown RBP17.99■□□□□ 0.47
NEK4-202ENST00000383721 ZNF335Q9H4Z2 1342 aaPredicted RBP17.99■□□□□ 0.47
NEK4-202ENST00000383721 MORC1Q86VD1 984 aa17.99■□□□□ 0.47
NEK4-202ENST00000383721 SAFB2Q14151 953 aaKnown RBP eCLIP17.98■□□□□ 0.47
NEK4-202ENST00000383721 WAPLQ7Z5K2 1190 aa17.98■□□□□ 0.47
NEK4-202ENST00000383721 WWC1Q8IX03 1113 aa17.98■□□□□ 0.47
NEK4-202ENST00000383721 ROBO2Q9HCK4 1378 aa17.98■□□□□ 0.47
NEK4-202ENST00000383721 LAS1LQ9Y4W2 734 aaKnown RBP17.97■□□□□ 0.47
NEK4-202ENST00000383721 CHD2O14647 1828 aaKnown RBP17.97■□□□□ 0.47
NEK4-202ENST00000383721 ABCC11Q96J66 1382 aa17.97■□□□□ 0.47
NEK4-202ENST00000383721 PIK3R4Q99570 1358 aa17.97■□□□□ 0.47
NEK4-202ENST00000383721 TNNT2P45379 298 aaPredicted RBP17.96■□□□□ 0.47
NEK4-202ENST00000383721 PRAM1Q96QH2 718 aa17.96■□□□□ 0.47
NEK4-202ENST00000383721 STRCP1A6NGW2 1772 aa17.96■□□□□ 0.47
NEK4-202ENST00000383721 C8orf34Q49A92 452 aa17.96■□□□□ 0.47
NEK4-202ENST00000383721 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms